RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	IGKV2D-28	P01615	120 aa		3.06	□□□□□ -1.92
HDAC6-223	ENST00000480525	HINT1	P49773	126 aa	Predicted RBP	3.06	□□□□□ -1.92
HDAC6-223	ENST00000480525	LINC00483	Q53H64	154 aa		3.06	□□□□□ -1.92
HDAC6-223	ENST00000480525	PYY3	Q5JQD4	70 aa		3.06	□□□□□ -1.92
HDAC6-223	ENST00000480525	S100A7L2	Q5SY68	101 aa		3.06	□□□□□ -1.92
HDAC6-223	ENST00000480525	SLC25A34	Q6PIV7	304 aa		3.06	□□□□□ -1.92
HDAC6-223	ENST00000480525	ATOH7	Q8N100	152 aa		3.06	□□□□□ -1.92
HDAC6-223	ENST00000480525	DAND5	Q8N907	189 aa		3.06	□□□□□ -1.92
HDAC6-223	ENST00000480525	TTTY13	Q9BZ97	58 aa		3.06	□□□□□ -1.92
HDAC6-223	ENST00000480525	DHRS4-AS1	Q9P1J3	65 aa		3.06	□□□□□ -1.92
HDAC6-223	ENST00000480525		A0A0U1RRA0	63 aa		3.05	□□□□□ -1.92
HDAC6-223	ENST00000480525	TMEM238L	A0A1B0GVL6	79 aa		3.05	□□□□□ -1.92
HDAC6-223	ENST00000480525	ETDC	A0A1B0GVM5	59 aa		3.05	□□□□□ -1.92
HDAC6-223	ENST00000480525		A0A1B0GWB2	263 aa		3.05	□□□□□ -1.92
HDAC6-223	ENST00000480525		A6NJY4	79 aa		3.05	□□□□□ -1.92
HDAC6-223	ENST00000480525	RPL37AP8	A6NKH3	93 aa		3.05	□□□□□ -1.92
HDAC6-223	ENST00000480525		B5MCH6	92 aa		3.05	□□□□□ -1.92
HDAC6-223	ENST00000480525	EIF4EBP3	O60516	100 aa	Predicted RBP	3.05	□□□□□ -1.92
HDAC6-223	ENST00000480525	SMIM6	P0DI80	62 aa		3.05	□□□□□ -1.92
HDAC6-223	ENST00000480525	UBE2A	P49459	152 aa		3.05	□□□□□ -1.92
HDAC6-223	ENST00000480525		A0A0B4J2C4	111 aa		3.04	□□□□□ -1.92
HDAC6-223	ENST00000480525	GAGE10	A6NGK3	116 aa		3.04	□□□□□ -1.92
HDAC6-223	ENST00000480525	NCR3	O14931	201 aa		3.04	□□□□□ -1.92
HDAC6-223	ENST00000480525	CRYGA	P11844	174 aa		3.04	□□□□□ -1.92
HDAC6-223	ENST00000480525	SPRR1B	P22528	89 aa		3.04	□□□□□ -1.92
HDAC6-223	ENST00000480525	ELOF1	P60002	83 aa	Known RBP	3.04	□□□□□ -1.92
HDAC6-223	ENST00000480525	RPS29	P62273	56 aa	Known RBP	3.04	□□□□□ -1.92
HDAC6-223	ENST00000480525	SPATA45	Q537H7	98 aa		3.04	□□□□□ -1.92
HDAC6-223	ENST00000480525	FAM19A1	Q7Z5A9	133 aa		3.04	□□□□□ -1.92
HDAC6-223	ENST00000480525	MUSTN1	Q8IVN3	82 aa		3.04	□□□□□ -1.92
HDAC6-223	ENST00000480525	NHP2	Q9NX24	153 aa	Known RBP	3.04	□□□□□ -1.92
HDAC6-223	ENST00000480525	HERC1	Q15751	4861 aa		3.03	□□□□□ -1.92
HDAC6-223	ENST00000480525		J3QL48	77 aa		3.03	□□□□□ -1.92
HDAC6-223	ENST00000480525	BVES-AS1	Q5T3Y7	98 aa		3.03	□□□□□ -1.92
HDAC6-223	ENST00000480525	C2orf91	Q6ZV80	131 aa		3.03	□□□□□ -1.92
HDAC6-223	ENST00000480525	SMCR5	Q8TEV8	140 aa		3.03	□□□□□ -1.92
HDAC6-223	ENST00000480525	PPDPFL	Q8WWR9	84 aa		3.03	□□□□□ -1.92
HDAC6-223	ENST00000480525	SPRR4	Q96PI1	79 aa		3.03	□□□□□ -1.92
HDAC6-223	ENST00000480525	UQCR10	Q9UDW1	63 aa		3.03	□□□□□ -1.92
HDAC6-223	ENST00000480525	PAM16	Q9Y3D7	125 aa		3.03	□□□□□ -1.92
HDAC6-223	ENST00000480525	IGLV5-48	A0A075B6I7	105 aa		3.02	□□□□□ -1.93
HDAC6-223	ENST00000480525		A0A1B0GX51	115 aa		3.02	□□□□□ -1.93
HDAC6-223	ENST00000480525	GHRH	P01286	108 aa		3.02	□□□□□ -1.93
HDAC6-223	ENST00000480525	PRLH	P81277	87 aa		3.02	□□□□□ -1.93
HDAC6-223	ENST00000480525	HSD52	Q0P140	79 aa		3.02	□□□□□ -1.93
HDAC6-223	ENST00000480525	SPAG11A	Q6PDA7	123 aa		3.02	□□□□□ -1.93
HDAC6-223	ENST00000480525	HIST1H4G	Q99525	98 aa		3.02	□□□□□ -1.93
HDAC6-223	ENST00000480525		Q9BRP9	147 aa		3.02	□□□□□ -1.93
HDAC6-223	ENST00000480525	VAMP3	Q15836	100 aa		3.01	□□□□□ -1.93
HDAC6-223	ENST00000480525	C6orf99	Q4VX62	202 aa		3.01	□□□□□ -1.93
HDAC6-223	ENST00000480525	OCIAD2	Q56VL3	154 aa		3.01	□□□□□ -1.93
HDAC6-223	ENST00000480525	SSBP3-AS1	Q7Z2R9	100 aa		3.01	□□□□□ -1.93
HDAC6-223	ENST00000480525	CEND1	Q8N111	149 aa		3.01	□□□□□ -1.93
HDAC6-223	ENST00000480525	C14orf144	Q96I85	54 aa		3.01	□□□□□ -1.93
HDAC6-223	ENST00000480525		A0A087X002	238 aa		3	□□□□□ -1.93
HDAC6-223	ENST00000480525		A6NDN8	102 aa		3	□□□□□ -1.93
HDAC6-223	ENST00000480525	PCP4L1	A6NKN8	68 aa		3	□□□□□ -1.93
HDAC6-223	ENST00000480525		H0YGX0	51 aa		3	□□□□□ -1.93
HDAC6-223	ENST00000480525		H3BQ85	93 aa		3	□□□□□ -1.93
HDAC6-223	ENST00000480525	COX7B	P24311	80 aa		3	□□□□□ -1.93
HDAC6-223	ENST00000480525	OR13C6P	Q8NH95	151 aa		3	□□□□□ -1.93
HDAC6-223	ENST00000480525	HIGD2A	Q9BW72	106 aa		3	□□□□□ -1.93
HDAC6-223	ENST00000480525	SLC25A20	O43772	301 aa		2.99	□□□□□ -1.93
HDAC6-223	ENST00000480525	SNCG	O76070	127 aa		2.99	□□□□□ -1.93
HDAC6-223	ENST00000480525	SPINK1	P00995	79 aa		2.99	□□□□□ -1.93
HDAC6-223	ENST00000480525	CFC1B	P0CG36	223 aa		2.99	□□□□□ -1.93
HDAC6-223	ENST00000480525	CFC1	P0CG37	223 aa		2.99	□□□□□ -1.93
HDAC6-223	ENST00000480525	NPC2	P61916	151 aa		2.99	□□□□□ -1.93
HDAC6-223	ENST00000480525	CD164	Q04900	197 aa		2.99	□□□□□ -1.93
HDAC6-223	ENST00000480525	PRR26	Q8N8Z3	221 aa		2.99	□□□□□ -1.93
HDAC6-223	ENST00000480525	TYMSOS	Q8TAI1	123 aa		2.99	□□□□□ -1.93
HDAC6-223	ENST00000480525	SMIM11B	Q8TCY0	68 aa		2.99	□□□□□ -1.93
HDAC6-223	ENST00000480525	PRO1854	Q9UHT4	67 aa		2.99	□□□□□ -1.93
HDAC6-223	ENST00000480525	HMCN2	Q8NDA2	5059 aa		2.98	□□□□□ -1.93
HDAC6-223	ENST00000480525	TEX49	A0A1B0GTD5	131 aa		2.98	□□□□□ -1.93
HDAC6-223	ENST00000480525		M0R143	59 aa		2.98	□□□□□ -1.93
HDAC6-223	ENST00000480525	KRTAP13-2	Q52LG2	175 aa		2.98	□□□□□ -1.93
HDAC6-223	ENST00000480525		Q5XG85	94 aa		2.98	□□□□□ -1.93
HDAC6-223	ENST00000480525	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	2.98	□□□□□ -1.93
HDAC6-223	ENST00000480525	LINC00575	Q6W349	94 aa		2.98	□□□□□ -1.93
HDAC6-223	ENST00000480525		Q8NBF4	154 aa		2.98	□□□□□ -1.93
HDAC6-223	ENST00000480525	IGLV8-61	A0A075B6I0	122 aa		2.97	□□□□□ -1.93
HDAC6-223	ENST00000480525	TSTD3	H0UI37	97 aa		2.97	□□□□□ -1.93
HDAC6-223	ENST00000480525	ERC2-IT1	O76042	136 aa		2.97	□□□□□ -1.93
HDAC6-223	ENST00000480525	LINC00304	Q8N9R0	145 aa		2.97	□□□□□ -1.93
HDAC6-223	ENST00000480525	RAB37	Q96AX2	223 aa		2.97	□□□□□ -1.93
HDAC6-223	ENST00000480525	hADV29S1	A0JD25	119 aa		2.96	□□□□□ -1.94
HDAC6-223	ENST00000480525	COX6C	P09669	75 aa		2.96	□□□□□ -1.94
HDAC6-223	ENST00000480525	FXYD2	P54710	66 aa		2.96	□□□□□ -1.94
HDAC6-223	ENST00000480525	LINC01547	P58512	204 aa	Predicted RBP	2.96	□□□□□ -1.94
HDAC6-223	ENST00000480525	FP248	Q71RG6	208 aa	Predicted RBP	2.96	□□□□□ -1.94
HDAC6-223	ENST00000480525	C12orf57	Q99622	126 aa		2.96	□□□□□ -1.94
HDAC6-223	ENST00000480525	LAMTOR3	Q9UHA4	124 aa		2.96	□□□□□ -1.94
HDAC6-223	ENST00000480525		Q6JHZ5	121 aa		2.95	□□□□□ -1.94
HDAC6-223	ENST00000480525	GAGE2A	Q6NT46	116 aa		2.95	□□□□□ -1.94
HDAC6-223	ENST00000480525	C21orf62-AS1	Q17RA5	79 aa		2.94	□□□□□ -1.94
HDAC6-223	ENST00000480525	ASB16-AS1	Q495Z4	193 aa		2.94	□□□□□ -1.94
HDAC6-223	ENST00000480525		Q6Q795	121 aa		2.94	□□□□□ -1.94
HDAC6-223	ENST00000480525	SMIM29	Q86T20	159 aa		2.94	□□□□□ -1.94
HDAC6-223	ENST00000480525	PRO1933	Q9H354	126 aa		2.94	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms