RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 H7C2G1 150 aa4.04□□□□□ -1.76
HERC4-210ENST00000480158 Q6ZSA8 131 aa4.04□□□□□ -1.76
HERC4-210ENST00000480158 COPS9Q8WXC6 57 aa4.04□□□□□ -1.76
HERC4-210ENST00000480158 DYNC1H1Q14204 4646 aaKnown RBP4.04□□□□□ -1.76
HERC4-210ENST00000480158 LOC107984156A0A0G2JMH3 177 aa4.03□□□□□ -1.76
HERC4-210ENST00000480158 K7ERJ3 54 aa4.03□□□□□ -1.76
HERC4-210ENST00000480158 UBE2BP63146 152 aa4.03□□□□□ -1.76
HERC4-210ENST00000480158 TAL2Q16559 108 aa4.03□□□□□ -1.76
HERC4-210ENST00000480158 S100A7L2Q5SY68 101 aa4.03□□□□□ -1.76
HERC4-210ENST00000480158 MRPL55Q7Z7F7 128 aaKnown RBP4.03□□□□□ -1.76
HERC4-210ENST00000480158 ARL17AQ8IVW1 177 aa4.03□□□□□ -1.76
HERC4-210ENST00000480158 LINC00337Q8N6G1 96 aa4.03□□□□□ -1.76
HERC4-210ENST00000480158 C7orf33Q8WU49 177 aa4.03□□□□□ -1.76
HERC4-210ENST00000480158 LINC00167Q96N53 147 aa4.03□□□□□ -1.76
HERC4-210ENST00000480158 NHP2Q9NX24 153 aaKnown RBP4.03□□□□□ -1.76
HERC4-210ENST00000480158 XGP55808 180 aa4.03□□□□□ -1.76
HERC4-210ENST00000480158 OCIAD2Q56VL3 154 aa4.03□□□□□ -1.76
HERC4-210ENST00000480158 BVES-AS1Q5T3Y7 98 aa4.03□□□□□ -1.76
HERC4-210ENST00000480158 KRTAP11-1Q8IUC1 163 aa4.03□□□□□ -1.76
HERC4-210ENST00000480158 PLAC8Q9NZF1 115 aa4.03□□□□□ -1.76
HERC4-210ENST00000480158 LRP1BQ9NZR2 4599 aa4.02□□□□□ -1.77
HERC4-210ENST00000480158 TRBV10-3A0A0K0K1G6 114 aa4.02□□□□□ -1.77
HERC4-210ENST00000480158 K7ERU9 68 aa4.02□□□□□ -1.77
HERC4-210ENST00000480158 CFC1BP0CG36 223 aa4.02□□□□□ -1.77
HERC4-210ENST00000480158 CFC1P0CG37 223 aa4.02□□□□□ -1.77
HERC4-210ENST00000480158 M0R378 163 aa4.02□□□□□ -1.77
HERC4-210ENST00000480158 NDUFC2O95298 119 aa4.02□□□□□ -1.77
HERC4-210ENST00000480158 RAB37Q96AX2 223 aa4.02□□□□□ -1.77
HERC4-210ENST00000480158 SCGB1A1P11684 91 aa4.01□□□□□ -1.77
HERC4-210ENST00000480158 RPL13AP40429 203 aaKnown RBP4.01□□□□□ -1.77
HERC4-210ENST00000480158 IGLV1-50A0A075B6I6 118 aa4□□□□□ -1.77
HERC4-210ENST00000480158 IGLV5-37A0A075B6J1 123 aa4□□□□□ -1.77
HERC4-210ENST00000480158 KIAA1109Q2LD37 5005 aa4□□□□□ -1.77
HERC4-210ENST00000480158 TRBV10-2A0A0K0K1G8 114 aa4□□□□□ -1.77
HERC4-210ENST00000480158 A0A1B0GV72 72 aa4□□□□□ -1.77
HERC4-210ENST00000480158 Q1RN00 199 aa4□□□□□ -1.77
HERC4-210ENST00000480158 TMEM126AQ9H061 195 aa4□□□□□ -1.77
HERC4-210ENST00000480158 DNAH8Q96JB1 4490 aa3.99□□□□□ -1.77
HERC4-210ENST00000480158 TRAV13-2A0A0B4J235 113 aa3.99□□□□□ -1.77
HERC4-210ENST00000480158 IGLV6-57P01721 117 aa3.99□□□□□ -1.77
HERC4-210ENST00000480158 NAA38Q9BRA0 125 aaKnown RBP3.99□□□□□ -1.77
HERC4-210ENST00000480158 PRO1854Q9UHT4 67 aa3.99□□□□□ -1.77
HERC4-210ENST00000480158 TRAV23DV6A0A075B6W5 121 aa3.99□□□□□ -1.77
HERC4-210ENST00000480158 VAMP3Q15836 100 aa3.99□□□□□ -1.77
HERC4-210ENST00000480158 SMIM11BQ8TCY0 68 aa3.99□□□□□ -1.77
HERC4-210ENST00000480158 PPDPFQ9H3Y8 114 aa3.99□□□□□ -1.77
HERC4-210ENST00000480158 PSORS1C2Q9UIG4 136 aa3.99□□□□□ -1.77
HERC4-210ENST00000480158 A0A0B4J2C4 111 aa3.98□□□□□ -1.77
HERC4-210ENST00000480158 EPM2AB3EWF7 344 aa3.98□□□□□ -1.77
HERC4-210ENST00000480158 C1orf137Q5JT78 98 aa3.98□□□□□ -1.77
HERC4-210ENST00000480158 SRRM2Q9UQ35 2752 aaKnown RBP3.98□□□□□ -1.77
HERC4-210ENST00000480158 C6orf99Q4VX62 202 aa3.97□□□□□ -1.77
HERC4-210ENST00000480158 REG3GQ6UW15 175 aa3.97□□□□□ -1.77
HERC4-210ENST00000480158 ZNF73O43830 326 aaPredicted RBP3.97□□□□□ -1.77
HERC4-210ENST00000480158 CDK2AP2O75956 126 aa3.97□□□□□ -1.77
HERC4-210ENST00000480158 PRLHP81277 87 aa3.97□□□□□ -1.77
HERC4-210ENST00000480158 FAM19A1Q7Z5A9 133 aa3.97□□□□□ -1.77
HERC4-210ENST00000480158 KCNQ1DNQ9H478 68 aa3.97□□□□□ -1.77
HERC4-210ENST00000480158 APOBP04114 4563 aaKnown RBP3.97□□□□□ -1.77
HERC4-210ENST00000480158 A0A1B0GWB2 263 aa3.96□□□□□ -1.77
HERC4-210ENST00000480158 TSPAN13O95857 204 aa3.96□□□□□ -1.77
HERC4-210ENST00000480158 PSMB2P49721 201 aa3.96□□□□□ -1.77
HERC4-210ENST00000480158 ETDCA0A1B0GVM5 59 aa3.96□□□□□ -1.78
HERC4-210ENST00000480158 RPL37AP61513 92 aaKnown RBP3.95□□□□□ -1.78
HERC4-210ENST00000480158 DIRC1Q969H9 104 aa3.95□□□□□ -1.78
HERC4-210ENST00000480158 UBE2AP49459 152 aa3.95□□□□□ -1.78
HERC4-210ENST00000480158 MTURNQ8N3F0 131 aa3.95□□□□□ -1.78
HERC4-210ENST00000480158 BCE1O60756 84 aa3.94□□□□□ -1.78
HERC4-210ENST00000480158 HIGD2AQ9BW72 106 aa3.94□□□□□ -1.78
HERC4-210ENST00000480158 FAT1Q14517 4588 aa3.94□□□□□ -1.78
HERC4-210ENST00000480158 RYR1P21817 5038 aa3.94□□□□□ -1.78
HERC4-210ENST00000480158 H3BUT2 72 aa3.94□□□□□ -1.78
HERC4-210ENST00000480158 TAX1BP3O14907 124 aa3.94□□□□□ -1.78
HERC4-210ENST00000480158 SCGB1C2P0DMR2 95 aa3.94□□□□□ -1.78
HERC4-210ENST00000480158 RPL28P46779 137 aaKnown RBP3.94□□□□□ -1.78
HERC4-210ENST00000480158 Q5VSD8 79 aa3.94□□□□□ -1.78
HERC4-210ENST00000480158 GAGE2AQ6NT46 116 aa3.94□□□□□ -1.78
HERC4-210ENST00000480158 KRTAP4-16G5E9R7 235 aaPredicted RBP3.93□□□□□ -1.78
HERC4-210ENST00000480158 COX7BP24311 80 aa3.93□□□□□ -1.78
HERC4-210ENST00000480158 SPRR1AP35321 89 aa3.93□□□□□ -1.78
HERC4-210ENST00000480158 IGLV7-43P04211 117 aa3.93□□□□□ -1.78
HERC4-210ENST00000480158 CLEC2BQ92478 149 aa3.93□□□□□ -1.78
HERC4-210ENST00000480158 SIGMAR1Q99720 223 aa3.93□□□□□ -1.78
HERC4-210ENST00000480158 Q6ZRX8 168 aa3.92□□□□□ -1.78
HERC4-210ENST00000480158 Q9BRP9 147 aa3.92□□□□□ -1.78
HERC4-210ENST00000480158 BIRC6Q9NR09 4857 aa3.92□□□□□ -1.78
HERC4-210ENST00000480158 HSPG2P98160 4391 aa3.92□□□□□ -1.78
HERC4-210ENST00000480158 ERC2-IT1O76042 136 aa3.92□□□□□ -1.78
HERC4-210ENST00000480158 ELOF1P60002 83 aaKnown RBP3.92□□□□□ -1.78
HERC4-210ENST00000480158 FAM218AQ96MZ4 157 aa3.92□□□□□ -1.78
HERC4-210ENST00000480158 ZNF861PO60384 105 aa3.91□□□□□ -1.78
HERC4-210ENST00000480158 COX6CP09669 75 aa3.91□□□□□ -1.78
HERC4-210ENST00000480158 GTF2H5Q6ZYL4 71 aa3.91□□□□□ -1.78
HERC4-210ENST00000480158 SMCR5Q8TEV8 140 aa3.91□□□□□ -1.78
HERC4-210ENST00000480158 VPS13BQ7Z7G8 4022 aa3.91□□□□□ -1.78
HERC4-210ENST00000480158 Q8N1X5 172 aa3.91□□□□□ -1.78
HERC4-210ENST00000480158 DEFB105AQ8NG35 78 aa3.91□□□□□ -1.78
HERC4-210ENST00000480158 KRTAP10-4P60372 401 aaPredicted RBP3.9□□□□□ -1.78
HERC4-210ENST00000480158 LINC00575Q6W349 94 aa3.9□□□□□ -1.78
HERC4-210ENST00000480158 KRTAP13-1Q8IUC0 172 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms