RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 LINC00474Q9P2X8 69 aa12.73□□□□□ -0.37
TNFRSF8-204ENST00000479933 PDE6GP18545 87 aa12.73□□□□□ -0.37
TNFRSF8-204ENST00000479933 Q6ZVQ6 151 aa12.73□□□□□ -0.37
TNFRSF8-204ENST00000479933 BRK1Q8WUW1 75 aa12.73□□□□□ -0.37
TNFRSF8-204ENST00000479933 HIGD2BQ4VC39 106 aa12.72□□□□□ -0.37
TNFRSF8-204ENST00000479933 C15orf56Q8N910 161 aa12.7□□□□□ -0.38
TNFRSF8-204ENST00000479933 XAGE1AQ9HD64 81 aa12.7□□□□□ -0.38
TNFRSF8-204ENST00000479933 DIRC1Q969H9 104 aa12.69□□□□□ -0.38
TNFRSF8-204ENST00000479933 Q6ZRU5 148 aa12.68□□□□□ -0.38
TNFRSF8-204ENST00000479933 VPREB1P12018 145 aa12.66□□□□□ -0.38
TNFRSF8-204ENST00000479933 HAMPP81172 84 aa12.66□□□□□ -0.38
TNFRSF8-204ENST00000479933 IGKV2D-24A0A075B6R9 120 aa12.65□□□□□ -0.38
TNFRSF8-204ENST00000479933 M0R378 163 aa12.65□□□□□ -0.38
TNFRSF8-204ENST00000479933 DNAH10OSP0CZ25 163 aa12.65□□□□□ -0.38
TNFRSF8-204ENST00000479933 ZNF73O43830 326 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF8-204ENST00000479933 TM2D3Q9BRN9 247 aa12.64□□□□□ -0.39
TNFRSF8-204ENST00000479933 TMEM254Q8TBM7 123 aa12.63□□□□□ -0.39
TNFRSF8-204ENST00000479933 COX7BP24311 80 aa12.62□□□□□ -0.39
TNFRSF8-204ENST00000479933 NREPQ16612 68 aa12.62□□□□□ -0.39
TNFRSF8-204ENST00000479933 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF8-204ENST00000479933 ELOF1P60002 83 aaKnown RBP12.61□□□□□ -0.39
TNFRSF8-204ENST00000479933 SYCNQ0VAF6 134 aa12.61□□□□□ -0.39
TNFRSF8-204ENST00000479933 Q6ZQY7 126 aa12.61□□□□□ -0.39
TNFRSF8-204ENST00000479933 A0A0U1RQV1 116 aa12.6□□□□□ -0.39
TNFRSF8-204ENST00000479933 M0R2N4 97 aa12.6□□□□□ -0.39
TNFRSF8-204ENST00000479933 LAMTOR3Q9UHA4 124 aa12.6□□□□□ -0.39
TNFRSF8-204ENST00000479933 FAM229BQ4G0N7 80 aa12.58□□□□□ -0.4
TNFRSF8-204ENST00000479933 Q6ZRP5 223 aa12.56□□□□□ -0.4
TNFRSF8-204ENST00000479933 PRR15Q8IV56 129 aa12.56□□□□□ -0.4
TNFRSF8-204ENST00000479933 BPY2O14599 106 aa12.55□□□□□ -0.4
TNFRSF8-204ENST00000479933 PRYO14603 147 aa12.55□□□□□ -0.4
TNFRSF8-204ENST00000479933 STAB1Q9NY15 2570 aa12.55□□□□□ -0.4
TNFRSF8-204ENST00000479933 TENM3Q9P273 2699 aa12.54□□□□□ -0.4
TNFRSF8-204ENST00000479933 CMYA5Q8N3K9 4069 aa12.53□□□□□ -0.4
TNFRSF8-204ENST00000479933 LINC00588Q9Y4M8 146 aa12.53□□□□□ -0.4
TNFRSF8-204ENST00000479933 FBN1P35555 2871 aaKnown RBP12.53□□□□□ -0.4
TNFRSF8-204ENST00000479933 TLX1NBP0CAT3 122 aa12.53□□□□□ -0.4
TNFRSF8-204ENST00000479933 PKD1L1Q8TDX9 2849 aa12.52□□□□□ -0.41
TNFRSF8-204ENST00000479933 DNAH3Q8TD57 4116 aa12.52□□□□□ -0.41
TNFRSF8-204ENST00000479933 FUSP35637 526 aaKnown RBP eCLIP12.52□□□□□ -0.41
TNFRSF8-204ENST00000479933 MPLKIPQ8TAP9 179 aa12.52□□□□□ -0.41
TNFRSF8-204ENST00000479933 LINC00528Q8N1L1 170 aa12.51□□□□□ -0.41
TNFRSF8-204ENST00000479933 NKAPP1Q8N9T2 125 aa12.5□□□□□ -0.41
TNFRSF8-204ENST00000479933 OCR1Q9BZK8 76 aa12.5□□□□□ -0.41
TNFRSF8-204ENST00000479933 PLA2G2DQ9UNK4 145 aa12.5□□□□□ -0.41
TNFRSF8-204ENST00000479933 MAST4O15021 2626 aa12.49□□□□□ -0.41
TNFRSF8-204ENST00000479933 K7EIL1 84 aa12.48□□□□□ -0.41
TNFRSF8-204ENST00000479933 KCNQ1DNQ9H478 68 aa12.48□□□□□ -0.41
TNFRSF8-204ENST00000479933 PRB2P02812 416 aaPredicted RBP12.46□□□□□ -0.41
TNFRSF8-204ENST00000479933 FLNBO75369 2602 aaKnown RBP12.46□□□□□ -0.41
TNFRSF8-204ENST00000479933 ANK2Q01484 3957 aa12.45□□□□□ -0.42
TNFRSF8-204ENST00000479933 PMAIP1Q13794 54 aa12.44□□□□□ -0.42
TNFRSF8-204ENST00000479933 Q1T7F1 81 aa12.44□□□□□ -0.42
TNFRSF8-204ENST00000479933 IGKV4-1P06312 121 aa12.43□□□□□ -0.42
TNFRSF8-204ENST00000479933 C7orf33Q8WU49 177 aa12.43□□□□□ -0.42
TNFRSF8-204ENST00000479933 IGLV5-37A0A075B6J1 123 aa12.43□□□□□ -0.42
TNFRSF8-204ENST00000479933 SCXQ7RTU7 201 aa12.43□□□□□ -0.42
TNFRSF8-204ENST00000479933 SERTAD4-AS1Q5TG53 156 aa12.42□□□□□ -0.42
TNFRSF8-204ENST00000479933 BAHCC1Q9P281 2608 aa12.42□□□□□ -0.42
TNFRSF8-204ENST00000479933 hDV103S1A0JD37 113 aa12.41□□□□□ -0.42
TNFRSF8-204ENST00000479933 LCE6AA0A183 80 aa12.38□□□□□ -0.43
TNFRSF8-204ENST00000479933 CASC10Q5T4H9 136 aa12.38□□□□□ -0.43
TNFRSF8-204ENST00000479933 DHRS4-AS1Q9P1J3 65 aa12.37□□□□□ -0.43
TNFRSF8-204ENST00000479933 NOTCH1P46531 2555 aa12.36□□□□□ -0.43
TNFRSF8-204ENST00000479933 IGLV1-50A0A075B6I6 118 aa12.34□□□□□ -0.43
TNFRSF8-204ENST00000479933 Q6ZRX8 168 aa12.33□□□□□ -0.44
TNFRSF8-204ENST00000479933 HIGD2AQ9BW72 106 aa12.33□□□□□ -0.44
TNFRSF8-204ENST00000479933 SPRR1AP35321 89 aa12.32□□□□□ -0.44
TNFRSF8-204ENST00000479933 ETDCA0A1B0GVM5 59 aa12.31□□□□□ -0.44
TNFRSF8-204ENST00000479933 COL6A5A8TX70 2615 aa12.31□□□□□ -0.44
TNFRSF8-204ENST00000479933 KRTAP4-16G5E9R7 235 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF8-204ENST00000479933 FAM168BA1KXE4 195 aa12.3□□□□□ -0.44
TNFRSF8-204ENST00000479933 RPL37AP8A6NKH3 93 aa12.29□□□□□ -0.44
TNFRSF8-204ENST00000479933 MRPL55Q7Z7F7 128 aaKnown RBP12.29□□□□□ -0.44
TNFRSF8-204ENST00000479933 HUWE1Q7Z6Z7 4374 aaKnown RBP12.28□□□□□ -0.44
TNFRSF8-204ENST00000479933 Q8N377 158 aa12.28□□□□□ -0.44
TNFRSF8-204ENST00000479933 Q8N9L7 120 aa12.28□□□□□ -0.44
TNFRSF8-204ENST00000479933 CD164Q04900 197 aa12.27□□□□□ -0.45
TNFRSF8-204ENST00000479933 KRTAP7-1Q8IUC3 87 aa12.26□□□□□ -0.45
TNFRSF8-204ENST00000479933 ZCCHC13Q8WW36 166 aaKnown RBP12.26□□□□□ -0.45
TNFRSF8-204ENST00000479933 NBEAL1Q6ZS30 2694 aa12.26□□□□□ -0.45
TNFRSF8-204ENST00000479933 IGLV5-48A0A075B6I7 105 aa12.26□□□□□ -0.45
TNFRSF8-204ENST00000479933 DEFB105AQ8NG35 78 aa12.26□□□□□ -0.45
TNFRSF8-204ENST00000479933 C1orf64Q8NEQ6 169 aa12.25□□□□□ -0.45
TNFRSF8-204ENST00000479933 CYP4F30PQ9H0H9 118 aa12.25□□□□□ -0.45
TNFRSF8-204ENST00000479933 Q9BRP9 147 aa12.25□□□□□ -0.45
TNFRSF8-204ENST00000479933 DNAH1Q9P2D7 4330 aa12.23□□□□□ -0.45
TNFRSF8-204ENST00000479933 A0A1B0GW54 56 aa12.23□□□□□ -0.45
TNFRSF8-204ENST00000479933 CNBPP62633 177 aaKnown RBP12.23□□□□□ -0.45
TNFRSF8-204ENST00000479933 UBE2DNLQ8IWF7 75 aa12.23□□□□□ -0.45
TNFRSF8-204ENST00000479933 PSCAO43653 123 aa12.21□□□□□ -0.45
TNFRSF8-204ENST00000479933 APLNQ9ULZ1 77 aa12.21□□□□□ -0.45
TNFRSF8-204ENST00000479933 C14orf177Q52M58 125 aa12.2□□□□□ -0.46
TNFRSF8-204ENST00000479933 REG3GQ6UW15 175 aa12.2□□□□□ -0.46
TNFRSF8-204ENST00000479933 TRAV22A0A0B4J277 110 aa12.2□□□□□ -0.46
TNFRSF8-204ENST00000479933 KRTAP1-5Q9BYS1 174 aa12.2□□□□□ -0.46
TNFRSF8-204ENST00000479933 C16orf90A8MZG2 172 aa12.19□□□□□ -0.46
TNFRSF8-204ENST00000479933 SMIM29Q86T20 159 aa12.18□□□□□ -0.46
TNFRSF8-204ENST00000479933 B9D2Q9BPU9 175 aa12.18□□□□□ -0.46
TNFRSF8-204ENST00000479933 UBE2BP63146 152 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms