RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 MIR7-3HGQ8N6C7 128 aa5.08□□□□□ -1.6
GPNMB-211ENST00000479625 LINC01549A6NIU2 74 aa5.07□□□□□ -1.6
GPNMB-211ENST00000479625 A0A096LNJ9 63 aa5.06□□□□□ -1.6
GPNMB-211ENST00000479625 MEIG1Q5JSS6 88 aa5.06□□□□□ -1.6
GPNMB-211ENST00000479625 H7C2G1 150 aa5.05□□□□□ -1.6
GPNMB-211ENST00000479625 TRIAP1O43715 76 aa5.05□□□□□ -1.6
GPNMB-211ENST00000479625 ATP6V1G1O75348 118 aa5.05□□□□□ -1.6
GPNMB-211ENST00000479625 DDTP30046 118 aa5.05□□□□□ -1.6
GPNMB-211ENST00000479625 S100A12P80511 92 aa5.05□□□□□ -1.6
GPNMB-211ENST00000479625 CHTOPQ9Y3Y2 248 aaKnown RBP5.05□□□□□ -1.6
GPNMB-211ENST00000479625 hCG_2014768A0A024R1R8 64 aa5.04□□□□□ -1.6
GPNMB-211ENST00000479625 MT-ND4LP03901 98 aa5.04□□□□□ -1.6
GPNMB-211ENST00000479625 FA2HQ7L5A8 372 aa5.04□□□□□ -1.6
GPNMB-211ENST00000479625 SMCO4Q9NRQ5 59 aa5.04□□□□□ -1.6
GPNMB-211ENST00000479625 PMCHL1Q16048 86 aa5.02□□□□□ -1.61
GPNMB-211ENST00000479625 BAGE3Q86Y29 109 aa5.02□□□□□ -1.61
GPNMB-211ENST00000479625 TMEM223A0PJW6 202 aa5.01□□□□□ -1.61
GPNMB-211ENST00000479625 MT2AP02795 61 aa5.01□□□□□ -1.61
GPNMB-211ENST00000479625 URB1-AS1Q96HZ7 61 aa5.01□□□□□ -1.61
GPNMB-211ENST00000479625 TRAV23DV6A0A075B6W5 121 aa5□□□□□ -1.61
GPNMB-211ENST00000479625 C1orf195Q5TG92 126 aa5□□□□□ -1.61
GPNMB-211ENST00000479625 TRBV10-2A0A0K0K1G8 114 aa4.99□□□□□ -1.61
GPNMB-211ENST00000479625 HBDP02042 147 aa4.99□□□□□ -1.61
GPNMB-211ENST00000479625 JOSD1Q15040 202 aaPredicted RBP4.99□□□□□ -1.61
GPNMB-211ENST00000479625 Q8N9P0 234 aaPredicted RBP4.99□□□□□ -1.61
GPNMB-211ENST00000479625 MT1FP04733 61 aa4.98□□□□□ -1.61
GPNMB-211ENST00000479625 SPRR1BP22528 89 aa4.98□□□□□ -1.61
GPNMB-211ENST00000479625 S100A7L2Q5SY68 101 aa4.98□□□□□ -1.61
GPNMB-211ENST00000479625 SPANXB1Q9NS25 103 aaPredicted RBP4.98□□□□□ -1.61
GPNMB-211ENST00000479625 A0A0G2JQZ4 141 aa4.97□□□□□ -1.61
GPNMB-211ENST00000479625 ZNF73O43830 326 aaPredicted RBP4.97□□□□□ -1.61
GPNMB-211ENST00000479625 HERV-K104P63124 156 aa4.97□□□□□ -1.61
GPNMB-211ENST00000479625 Q1RN00 199 aa4.97□□□□□ -1.61
GPNMB-211ENST00000479625 IGKV2-30P06310 120 aa4.96□□□□□ -1.62
GPNMB-211ENST00000479625 TSPEAR-AS2P59090 65 aa4.96□□□□□ -1.62
GPNMB-211ENST00000479625 CD164Q04900 197 aa4.96□□□□□ -1.62
GPNMB-211ENST00000479625 SMIM29Q86T20 159 aa4.96□□□□□ -1.62
GPNMB-211ENST00000479625 MAP1LC3CQ9BXW4 147 aa4.96□□□□□ -1.62
GPNMB-211ENST00000479625 LAMTOR3Q9UHA4 124 aa4.96□□□□□ -1.62
GPNMB-211ENST00000479625 LOC107984156A0A0G2JMH3 177 aa4.95□□□□□ -1.62
GPNMB-211ENST00000479625 FABP9Q0Z7S8 132 aa4.95□□□□□ -1.62
GPNMB-211ENST00000479625 SLC25A34Q6PIV7 304 aa4.95□□□□□ -1.62
GPNMB-211ENST00000479625 ARL17AQ8IVW1 177 aa4.95□□□□□ -1.62
GPNMB-211ENST00000479625 RPS10P5Q9NQ39 176 aa4.95□□□□□ -1.62
GPNMB-211ENST00000479625 MYMXA0A1B0GTQ4 84 aa4.94□□□□□ -1.62
GPNMB-211ENST00000479625 C5orf52A6NGY3 159 aa4.94□□□□□ -1.62
GPNMB-211ENST00000479625 NPC2P61916 151 aa4.94□□□□□ -1.62
GPNMB-211ENST00000479625 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
GPNMB-211ENST00000479625 Q5XG85 94 aa4.94□□□□□ -1.62
GPNMB-211ENST00000479625 C18orf32Q8TCD1 76 aa4.94□□□□□ -1.62
GPNMB-211ENST00000479625 PRO1933Q9H354 126 aa4.94□□□□□ -1.62
GPNMB-211ENST00000479625 LINC00587B1AMM8 73 aa4.93□□□□□ -1.62
GPNMB-211ENST00000479625 LINC00614P0C842 121 aa4.93□□□□□ -1.62
GPNMB-211ENST00000479625 SOSTDC1Q6X4U4 206 aa4.93□□□□□ -1.62
GPNMB-211ENST00000479625 MIEN1Q9BRT3 115 aa4.93□□□□□ -1.62
GPNMB-211ENST00000479625 NEBP20929 6669 aa4.92□□□□□ -1.62
GPNMB-211ENST00000479625 NDUFC2O95298 119 aa4.92□□□□□ -1.62
GPNMB-211ENST00000479625 DEFB105AQ8NG35 78 aa4.92□□□□□ -1.62
GPNMB-211ENST00000479625 C20orf202A1L168 122 aa4.91□□□□□ -1.62
GPNMB-211ENST00000479625 TRAV12-1A0A0B4J245 112 aa4.9□□□□□ -1.63
GPNMB-211ENST00000479625 KRTAP10-10P60014 251 aa4.9□□□□□ -1.63
GPNMB-211ENST00000479625 KRTAP6-3Q3LI67 103 aa4.9□□□□□ -1.63
GPNMB-211ENST00000479625 KRTAP19-6Q3LI70 58 aa4.9□□□□□ -1.63
GPNMB-211ENST00000479625 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.63
GPNMB-211ENST00000479625 COMMD7Q86VX2 200 aa4.9□□□□□ -1.63
GPNMB-211ENST00000479625 SEC11CQ9BY50 192 aa4.9□□□□□ -1.63
GPNMB-211ENST00000479625 S100PP25815 95 aa4.89□□□□□ -1.63
GPNMB-211ENST00000479625 HINT1P49773 126 aaPredicted RBP4.89□□□□□ -1.63
GPNMB-211ENST00000479625 TAL2Q16559 108 aa4.89□□□□□ -1.63
GPNMB-211ENST00000479625 Q75L30 129 aa4.89□□□□□ -1.63
GPNMB-211ENST00000479625 IFI27L1Q96BM0 104 aa4.89□□□□□ -1.63
GPNMB-211ENST00000479625 OBSCN-AS1Q96MR7 158 aa4.89□□□□□ -1.63
GPNMB-211ENST00000479625 DHRS4-AS1Q9P1J3 65 aa4.89□□□□□ -1.63
GPNMB-211ENST00000479625 AKR1D1P51857 326 aa4.88□□□□□ -1.63
GPNMB-211ENST00000479625 PCP2Q8IVA1 136 aa4.88□□□□□ -1.63
GPNMB-211ENST00000479625 LEPROTO15243 131 aa4.87□□□□□ -1.63
GPNMB-211ENST00000479625 COX19Q49B96 90 aa4.87□□□□□ -1.63
GPNMB-211ENST00000479625 TEX49A0A1B0GTD5 131 aa4.86□□□□□ -1.63
GPNMB-211ENST00000479625 H0Y8G0 127 aa4.86□□□□□ -1.63
GPNMB-211ENST00000479625 ELOF1P60002 83 aaKnown RBP4.86□□□□□ -1.63
GPNMB-211ENST00000479625 ADAMTSL4-AS1Q5T5F5 129 aa4.86□□□□□ -1.63
GPNMB-211ENST00000479625 OR13C6PQ8NH95 151 aa4.86□□□□□ -1.63
GPNMB-211ENST00000479625 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
GPNMB-211ENST00000479625 J3QQQ9 107 aa4.85□□□□□ -1.63
GPNMB-211ENST00000479625 COX7BP24311 80 aa4.85□□□□□ -1.63
GPNMB-211ENST00000479625 LINC00846Q9NV44 126 aa4.85□□□□□ -1.63
GPNMB-211ENST00000479625 TCL1BO95988 128 aa4.84□□□□□ -1.63
GPNMB-211ENST00000479625 C6orf99Q4VX62 202 aa4.84□□□□□ -1.63
GPNMB-211ENST00000479625 TRAPPC1Q9Y5R8 145 aa4.84□□□□□ -1.63
GPNMB-211ENST00000479625 TRBV20-1A0A075B6N2 111 aa4.83□□□□□ -1.64
GPNMB-211ENST00000479625 IFITM2Q01629 132 aa4.83□□□□□ -1.64
GPNMB-211ENST00000479625 RHEBQ15382 184 aa4.83□□□□□ -1.64
GPNMB-211ENST00000479625 CBY1Q9Y3M2 126 aa4.83□□□□□ -1.64
GPNMB-211ENST00000479625 IGLV5-48A0A075B6I7 105 aa4.82□□□□□ -1.64
GPNMB-211ENST00000479625 A0A0J9YXY3 114 aa4.82□□□□□ -1.64
GPNMB-211ENST00000479625 LGALS3P17931 250 aaKnown RBP4.82□□□□□ -1.64
GPNMB-211ENST00000479625 C10orf91Q5T1B1 145 aa4.82□□□□□ -1.64
GPNMB-211ENST00000479625 C20orf166-AS1Q96NR2 134 aa4.82□□□□□ -1.64
GPNMB-211ENST00000479625 FAM236DA0A1B0GTK5 79 aa4.81□□□□□ -1.64
GPNMB-211ENST00000479625 TMEM218A2RU14 115 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms