RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 LIMD2Q9BT23 127 aa9.69□□□□□ -0.86
COL20A1-206ENST00000479501 KALRNO60229 2985 aa9.68□□□□□ -0.86
COL20A1-206ENST00000479501 C1orf64Q8NEQ6 169 aa9.68□□□□□ -0.86
COL20A1-206ENST00000479501 TEP1Q99973 2627 aaKnown RBP9.67□□□□□ -0.86
COL20A1-206ENST00000479501 LOC110117498A0A087WWA1 95 aa9.67□□□□□ -0.86
COL20A1-206ENST00000479501 TEX15Q9BXT5 2789 aa9.67□□□□□ -0.86
COL20A1-206ENST00000479501 UNC79Q9P2D8 2635 aa9.67□□□□□ -0.86
COL20A1-206ENST00000479501 GVQW2A0A096LPI5 108 aaPredicted RBP9.65□□□□□ -0.86
COL20A1-206ENST00000479501 COL12A1Q99715 3063 aa9.65□□□□□ -0.86
COL20A1-206ENST00000479501 LINC00167Q96N53 147 aa9.64□□□□□ -0.87
COL20A1-206ENST00000479501 PRLHP81277 87 aa9.64□□□□□ -0.87
COL20A1-206ENST00000479501 CR1P17927 2039 aa9.64□□□□□ -0.87
COL20A1-206ENST00000479501 ELOF1P60002 83 aaKnown RBP9.63□□□□□ -0.87
COL20A1-206ENST00000479501 LINC00588Q9Y4M8 146 aa9.63□□□□□ -0.87
COL20A1-206ENST00000479501 PRR34Q9NV39 138 aa9.63□□□□□ -0.87
COL20A1-206ENST00000479501 MYO15AQ9UKN7 3530 aa9.62□□□□□ -0.87
COL20A1-206ENST00000479501 KRTAP10-11P60412 298 aa9.61□□□□□ -0.87
COL20A1-206ENST00000479501 GCN1Q92616 2671 aaKnown RBP9.6□□□□□ -0.87
COL20A1-206ENST00000479501 LRBAP50851 2863 aa9.6□□□□□ -0.87
COL20A1-206ENST00000479501 A0A1B0GW54 56 aa9.6□□□□□ -0.87
COL20A1-206ENST00000479501 DNAH10OSP0CZ25 163 aa9.6□□□□□ -0.87
COL20A1-206ENST00000479501 IGLV6-57P01721 117 aa9.59□□□□□ -0.87
COL20A1-206ENST00000479501 VPREB1P12018 145 aa9.59□□□□□ -0.87
COL20A1-206ENST00000479501 Q6ZRP5 223 aa9.59□□□□□ -0.87
COL20A1-206ENST00000479501 Q8NBF4 154 aa9.59□□□□□ -0.87
COL20A1-206ENST00000479501 CIRBP-AS1Q8TBR5 109 aa9.58□□□□□ -0.88
COL20A1-206ENST00000479501 DMXL1Q9Y485 3027 aa9.58□□□□□ -0.88
COL20A1-206ENST00000479501 ZZEF1O43149 2961 aa9.57□□□□□ -0.88
COL20A1-206ENST00000479501 FAM104AQ969W3 186 aa9.57□□□□□ -0.88
COL20A1-206ENST00000479501 MDFIQ99750 246 aa9.57□□□□□ -0.88
COL20A1-206ENST00000479501 IGLV5-52A0A0A0MRZ9 124 aa9.56□□□□□ -0.88
COL20A1-206ENST00000479501 SETXQ7Z333 2677 aaKnown RBP9.55□□□□□ -0.88
COL20A1-206ENST00000479501 Q6ZRX8 168 aa9.55□□□□□ -0.88
COL20A1-206ENST00000479501 KLKP1Q107X0 134 aa9.54□□□□□ -0.88
COL20A1-206ENST00000479501 LINC00336Q6ZUF6 198 aa9.54□□□□□ -0.88
COL20A1-206ENST00000479501 UBR5O95071 2799 aaPredicted RBP9.54□□□□□ -0.88
COL20A1-206ENST00000479501 TACC2O95359 2948 aa9.54□□□□□ -0.88
COL20A1-206ENST00000479501 LOC400499M0QZD8 3231 aa9.54□□□□□ -0.88
COL20A1-206ENST00000479501 C1orf134Q5TEV5 83 aa9.53□□□□□ -0.88
COL20A1-206ENST00000479501 RETNLBQ9BQ08 111 aa9.53□□□□□ -0.88
COL20A1-206ENST00000479501 SPAG11AQ6PDA7 123 aa9.53□□□□□ -0.88
COL20A1-206ENST00000479501 CFAP47Q6ZTR5 3102 aa9.53□□□□□ -0.88
COL20A1-206ENST00000479501 SPINK1P00995 79 aa9.53□□□□□ -0.88
COL20A1-206ENST00000479501 COL6A5A8TX70 2615 aa9.52□□□□□ -0.88
COL20A1-206ENST00000479501 NOTCH1P46531 2555 aa9.52□□□□□ -0.89
COL20A1-206ENST00000479501 ITPR1Q14643 2758 aa9.51□□□□□ -0.89
COL20A1-206ENST00000479501 STAB1Q9NY15 2570 aa9.51□□□□□ -0.89
COL20A1-206ENST00000479501 ERC2-IT1O76042 136 aa9.51□□□□□ -0.89
COL20A1-206ENST00000479501 NBEAL2Q6ZNJ1 2754 aa9.51□□□□□ -0.89
COL20A1-206ENST00000479501 K7EIL1 84 aa9.5□□□□□ -0.89
COL20A1-206ENST00000479501 C15orf56Q8N910 161 aa9.5□□□□□ -0.89
COL20A1-206ENST00000479501 LINC00476Q8WZB0 136 aa9.5□□□□□ -0.89
COL20A1-206ENST00000479501 TP53AIP1Q9HCN2 124 aa9.5□□□□□ -0.89
COL20A1-206ENST00000479501 H3BPC8 53 aa9.5□□□□□ -0.89
COL20A1-206ENST00000479501 H7BZZ5 65 aa9.49□□□□□ -0.89
COL20A1-206ENST00000479501 TRBV7-4A0A0J9YYF1 115 aa9.48□□□□□ -0.89
COL20A1-206ENST00000479501 C16orf90A8MZG2 172 aa9.48□□□□□ -0.89
COL20A1-206ENST00000479501 TRAV22A0A0B4J277 110 aa9.48□□□□□ -0.89
COL20A1-206ENST00000479501 A8MUN3 132 aa9.48□□□□□ -0.89
COL20A1-206ENST00000479501 SERTAD4-AS1Q5TG53 156 aa9.48□□□□□ -0.89
COL20A1-206ENST00000479501 ST20-AS1Q8NBB2 130 aa9.48□□□□□ -0.89
COL20A1-206ENST00000479501 NBDYA0A0U1RRE5 68 aa9.47□□□□□ -0.89
COL20A1-206ENST00000479501 FAM168BA1KXE4 195 aa9.46□□□□□ -0.89
COL20A1-206ENST00000479501 LINC00528Q8N1L1 170 aa9.46□□□□□ -0.89
COL20A1-206ENST00000479501 A0A1B0GU69 56 aa9.46□□□□□ -0.9
COL20A1-206ENST00000479501 PHF5AQ7RTV0 110 aaKnown RBP9.46□□□□□ -0.9
COL20A1-206ENST00000479501 C9orf129Q5T035 196 aaKnown RBP9.46□□□□□ -0.9
COL20A1-206ENST00000479501 KCNQ1DNQ9H478 68 aa9.46□□□□□ -0.9
COL20A1-206ENST00000479501 USP34Q70CQ2 3546 aa9.45□□□□□ -0.9
COL20A1-206ENST00000479501 CHTF8P0CG12 524 aa9.44□□□□□ -0.9
COL20A1-206ENST00000479501 K7EQZ3 153 aa9.43□□□□□ -0.9
COL20A1-206ENST00000479501 RPL37AP61513 92 aaKnown RBP9.43□□□□□ -0.9
COL20A1-206ENST00000479501 ACYP2P14621 99 aa9.42□□□□□ -0.9
COL20A1-206ENST00000479501 IGLV1-50A0A075B6I6 118 aa9.42□□□□□ -0.9
COL20A1-206ENST00000479501 IGKV2D-30A0A075B6S6 120 aa9.41□□□□□ -0.9
COL20A1-206ENST00000479501 EPM2AB3EWF7 344 aa9.41□□□□□ -0.9
COL20A1-206ENST00000479501 IGKV2-30P06310 120 aa9.41□□□□□ -0.9
COL20A1-206ENST00000479501 UTP20O75691 2785 aaKnown RBP9.39□□□□□ -0.91
COL20A1-206ENST00000479501 ITPR2Q14571 2701 aa9.38□□□□□ -0.91
COL20A1-206ENST00000479501 LINC01600Q96MT4 127 aa9.38□□□□□ -0.91
COL20A1-206ENST00000479501 WIPF1O43516 503 aa9.37□□□□□ -0.91
COL20A1-206ENST00000479501 MOBPQ13875 183 aa9.37□□□□□ -0.91
COL20A1-206ENST00000479501 ATP11AUNQ6ZP68 121 aa9.37□□□□□ -0.91
COL20A1-206ENST00000479501 TLX1NBP0CAT3 122 aa9.36□□□□□ -0.91
COL20A1-206ENST00000479501 CYP4F30PQ9H0H9 118 aa9.36□□□□□ -0.91
COL20A1-206ENST00000479501 ZANQ9Y493 2812 aa9.36□□□□□ -0.91
COL20A1-206ENST00000479501 RTL8CO15255 209 aa9.34□□□□□ -0.91
COL20A1-206ENST00000479501 Q8N377 158 aa9.34□□□□□ -0.91
COL20A1-206ENST00000479501 CASC10Q5T4H9 136 aa9.33□□□□□ -0.92
COL20A1-206ENST00000479501 COA5Q86WW8 74 aa9.33□□□□□ -0.92
COL20A1-206ENST00000479501 C8orf87E5RJ46 101 aa9.32□□□□□ -0.92
COL20A1-206ENST00000479501 PLA2G2DQ9UNK4 145 aa9.32□□□□□ -0.92
COL20A1-206ENST00000479501 A8MWP4 228 aa9.32□□□□□ -0.92
COL20A1-206ENST00000479501 C7orf65Q6ZTY9 151 aa9.31□□□□□ -0.92
COL20A1-206ENST00000479501 LOC101927531A0A1B0GV80 90 aa9.28□□□□□ -0.92
COL20A1-206ENST00000479501 OBSCN-AS1Q96MR7 158 aa9.28□□□□□ -0.92
COL20A1-206ENST00000479501 C9orf163Q8N9P6 203 aa9.28□□□□□ -0.92
COL20A1-206ENST00000479501 NBEAL1Q6ZS30 2694 aa9.27□□□□□ -0.93
COL20A1-206ENST00000479501 IGLV8-61A0A075B6I0 122 aa9.27□□□□□ -0.93
COL20A1-206ENST00000479501 CD164Q04900 197 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms