RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 C7orf33Q8WU49 177 aa4.8□□□□□ -1.64
HMGCL-205ENST00000479458 PPDPFLQ8WWR9 84 aa4.8□□□□□ -1.64
HMGCL-205ENST00000479458 SPINK8P0C7L1 97 aa4.79□□□□□ -1.64
HMGCL-205ENST00000479458 ZNF22P17026 224 aaPredicted RBP4.79□□□□□ -1.64
HMGCL-205ENST00000479458 CXCL5P42830 114 aa4.79□□□□□ -1.64
HMGCL-205ENST00000479458 SRSF9Q13242 221 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGCL-205ENST00000479458 C9orf116Q5BN46 136 aaPredicted RBP4.79□□□□□ -1.64
HMGCL-205ENST00000479458 C6orf226Q5I0X4 101 aa4.79□□□□□ -1.64
HMGCL-205ENST00000479458 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
HMGCL-205ENST00000479458 TEN1Q86WV5 123 aa4.79□□□□□ -1.64
HMGCL-205ENST00000479458 PLEKHB2Q96CS7 222 aa4.79□□□□□ -1.64
HMGCL-205ENST00000479458 NDUFC2-KCTD14E9PQ53 114 aa4.78□□□□□ -1.64
HMGCL-205ENST00000479458 CKS1BP61024 79 aa4.78□□□□□ -1.64
HMGCL-205ENST00000479458 GAGE2EQ4V326 116 aa4.78□□□□□ -1.64
HMGCL-205ENST00000479458 GAGE2DQ9UEU5 116 aa4.78□□□□□ -1.64
HMGCL-205ENST00000479458 LPAP08519 4548 aa4.78□□□□□ -1.64
HMGCL-205ENST00000479458 A0A0B4J2C4 111 aa4.77□□□□□ -1.65
HMGCL-205ENST00000479458 LOC107984156A0A0G2JMH3 177 aa4.77□□□□□ -1.65
HMGCL-205ENST00000479458 IGLV5-39A0A0G2JS06 123 aa4.77□□□□□ -1.65
HMGCL-205ENST00000479458 LEPROTO15243 131 aa4.77□□□□□ -1.65
HMGCL-205ENST00000479458 LGALS3P17931 250 aaKnown RBP4.77□□□□□ -1.65
HMGCL-205ENST00000479458 PSMB2P49721 201 aa4.77□□□□□ -1.65
HMGCL-205ENST00000479458 PRR3P79522 188 aaKnown RBP4.77□□□□□ -1.65
HMGCL-205ENST00000479458 ARL17AQ8IVW1 177 aa4.77□□□□□ -1.65
HMGCL-205ENST00000479458 COX7B2Q8TF08 81 aa4.77□□□□□ -1.65
HMGCL-205ENST00000479458 FAM168BA1KXE4 195 aa4.76□□□□□ -1.65
HMGCL-205ENST00000479458 J3QQQ9 107 aa4.76□□□□□ -1.65
HMGCL-205ENST00000479458 C9orf129Q5T035 196 aaKnown RBP4.76□□□□□ -1.65
HMGCL-205ENST00000479458 PHF5AQ7RTV0 110 aaKnown RBP4.76□□□□□ -1.65
HMGCL-205ENST00000479458 KRTAP7-1Q8IUC3 87 aa4.76□□□□□ -1.65
HMGCL-205ENST00000479458 LINC01600Q96MT4 127 aa4.76□□□□□ -1.65
HMGCL-205ENST00000479458 CRCT1Q9UGL9 99 aa4.76□□□□□ -1.65
HMGCL-205ENST00000479458 TMEM223A0PJW6 202 aa4.75□□□□□ -1.65
HMGCL-205ENST00000479458 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
HMGCL-205ENST00000479458 TCL1BO95988 128 aa4.75□□□□□ -1.65
HMGCL-205ENST00000479458 TSPEAR-AS2P59090 65 aa4.75□□□□□ -1.65
HMGCL-205ENST00000479458 TMEM170BQ5T4T1 132 aa4.75□□□□□ -1.65
HMGCL-205ENST00000479458 FAM19A5Q7Z5A7 132 aaPredicted RBP4.75□□□□□ -1.65
HMGCL-205ENST00000479458 PRO1854Q9UHT4 67 aa4.75□□□□□ -1.65
HMGCL-205ENST00000479458 CFC1BP0CG36 223 aa4.74□□□□□ -1.65
HMGCL-205ENST00000479458 CFC1P0CG37 223 aa4.74□□□□□ -1.65
HMGCL-205ENST00000479458 ANKRD29Q8N6D5 301 aa4.74□□□□□ -1.65
HMGCL-205ENST00000479458 XAGE1AQ9HD64 81 aa4.74□□□□□ -1.65
HMGCL-205ENST00000479458 FSIP2Q5CZC0 6907 aa4.74□□□□□ -1.65
HMGCL-205ENST00000479458 SLC25A20O43772 301 aa4.73□□□□□ -1.65
HMGCL-205ENST00000479458 ATXN8Q156A1 80 aa4.73□□□□□ -1.65
HMGCL-205ENST00000479458 PSORS1C2Q9UIG4 136 aa4.73□□□□□ -1.65
HMGCL-205ENST00000479458 A4D1N5 150 aa4.72□□□□□ -1.65
HMGCL-205ENST00000479458 MT-ATP8P03928 68 aa4.72□□□□□ -1.65
HMGCL-205ENST00000479458 SCGB1C2P0DMR2 95 aa4.72□□□□□ -1.65
HMGCL-205ENST00000479458 KRTAP11-1Q8IUC1 163 aa4.72□□□□□ -1.65
HMGCL-205ENST00000479458 SPANXDQ9BXN6 97 aa4.72□□□□□ -1.65
HMGCL-205ENST00000479458 SPANXCQ9NY87 97 aa4.72□□□□□ -1.65
HMGCL-205ENST00000479458 ERG28Q9UKR5 140 aa4.72□□□□□ -1.65
HMGCL-205ENST00000479458 RPL13AP40429 203 aaKnown RBP4.71□□□□□ -1.66
HMGCL-205ENST00000479458 Q1RN00 199 aa4.71□□□□□ -1.66
HMGCL-205ENST00000479458 Q6Q795 121 aa4.71□□□□□ -1.66
HMGCL-205ENST00000479458 ZNF625Q96I27 306 aaPredicted RBP4.71□□□□□ -1.66
HMGCL-205ENST00000479458 KRTAP4-8A0A0G2JLE6 195 aa4.7□□□□□ -1.66
HMGCL-205ENST00000479458 A0A0J9YXY3 114 aa4.7□□□□□ -1.66
HMGCL-205ENST00000479458 TRBV10-2A0A0K0K1G8 114 aa4.7□□□□□ -1.66
HMGCL-205ENST00000479458 C9JAW5 83 aa4.7□□□□□ -1.66
HMGCL-205ENST00000479458 H3BT86 120 aa4.7□□□□□ -1.66
HMGCL-205ENST00000479458 KRTAP10-8P60410 259 aa4.7□□□□□ -1.66
HMGCL-205ENST00000479458 UBE2BP63146 152 aa4.7□□□□□ -1.66
HMGCL-205ENST00000479458 C1orf137Q5JT78 98 aa4.7□□□□□ -1.66
HMGCL-205ENST00000479458 SFTA2Q6UW10 78 aa4.7□□□□□ -1.66
HMGCL-205ENST00000479458 SPINK6Q6UWN8 80 aa4.7□□□□□ -1.66
HMGCL-205ENST00000479458 C22orf24Q9Y442 160 aa4.7□□□□□ -1.66
HMGCL-205ENST00000479458 TIMM17BO60830 172 aa4.69□□□□□ -1.66
HMGCL-205ENST00000479458 PFN2P35080 140 aa4.69□□□□□ -1.66
HMGCL-205ENST00000479458 COX17Q14061 63 aa4.69□□□□□ -1.66
HMGCL-205ENST00000479458 MUSTN1Q8IVN3 82 aa4.69□□□□□ -1.66
HMGCL-205ENST00000479458 SVIPQ8NHG7 77 aa4.69□□□□□ -1.66
HMGCL-205ENST00000479458 ANAPC13Q9BS18 74 aa4.69□□□□□ -1.66
HMGCL-205ENST00000479458 KRTAP3-1Q9BYR8 98 aa4.69□□□□□ -1.66
HMGCL-205ENST00000479458 IGLV5-37A0A075B6J1 123 aa4.68□□□□□ -1.66
HMGCL-205ENST00000479458 SNCGO76070 127 aa4.68□□□□□ -1.66
HMGCL-205ENST00000479458 IGLV7-43P04211 117 aa4.68□□□□□ -1.66
HMGCL-205ENST00000479458 IFITM1P13164 125 aa4.68□□□□□ -1.66
HMGCL-205ENST00000479458 MRPL55Q7Z7F7 128 aaKnown RBP4.68□□□□□ -1.66
HMGCL-205ENST00000479458 LITAFQ99732 161 aa4.68□□□□□ -1.66
HMGCL-205ENST00000479458 SND1-IT1Q9HBX3 110 aa4.68□□□□□ -1.66
HMGCL-205ENST00000479458 FAM240AA0A1B0GVK7 77 aa4.67□□□□□ -1.66
HMGCL-205ENST00000479458 TRIAP1O43715 76 aa4.67□□□□□ -1.66
HMGCL-205ENST00000479458 COX6CP09669 75 aa4.67□□□□□ -1.66
HMGCL-205ENST00000479458 VPREB1P12018 145 aa4.67□□□□□ -1.66
HMGCL-205ENST00000479458 REG3GQ6UW15 175 aa4.67□□□□□ -1.66
HMGCL-205ENST00000479458 NDUFA12Q9UI09 145 aa4.67□□□□□ -1.66
HMGCL-205ENST00000479458 H7C2G1 150 aa4.66□□□□□ -1.66
HMGCL-205ENST00000479458 LST1O00453 97 aa4.66□□□□□ -1.66
HMGCL-205ENST00000479458 LINC00158P58513 81 aa4.66□□□□□ -1.66
HMGCL-205ENST00000479458 HERV-K104P63124 156 aa4.66□□□□□ -1.66
HMGCL-205ENST00000479458 NKAPP1Q8N9T2 125 aa4.66□□□□□ -1.66
HMGCL-205ENST00000479458 Q8NDZ9 215 aa4.66□□□□□ -1.66
HMGCL-205ENST00000479458 COPS9Q8WXC6 57 aa4.66□□□□□ -1.66
HMGCL-205ENST00000479458 LINC00167Q96N53 147 aa4.66□□□□□ -1.66
HMGCL-205ENST00000479458 A0A0U1RRA0 63 aa4.65□□□□□ -1.67
HMGCL-205ENST00000479458 MEIG1Q5JSS6 88 aa4.65□□□□□ -1.67
HMGCL-205ENST00000479458 DIRC1Q969H9 104 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms