RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 S100A6P06703 90 aa12.11□□□□□ -0.47
PKP4-209ENST00000479398 TRAV23DV6A0A075B6W5 121 aa12.1□□□□□ -0.47
PKP4-209ENST00000479398 SNRPEP62304 92 aaKnown RBP12.1□□□□□ -0.47
PKP4-209ENST00000479398 SCGB1D4Q6XE38 83 aa12.1□□□□□ -0.47
PKP4-209ENST00000479398 UBR4Q5T4S7 5183 aa12.09□□□□□ -0.47
PKP4-209ENST00000479398 LRP2P98164 4655 aa12.08□□□□□ -0.47
PKP4-209ENST00000479398 C3orf22Q8N5N4 141 aa12.08□□□□□ -0.48
PKP4-209ENST00000479398 SPANXDQ9BXN6 97 aa12.08□□□□□ -0.48
PKP4-209ENST00000479398 CBY1Q9Y3M2 126 aa12.08□□□□□ -0.48
PKP4-209ENST00000479398 Q6ZRX8 168 aa12.07□□□□□ -0.48
PKP4-209ENST00000479398 PCP2Q8IVA1 136 aa12.07□□□□□ -0.48
PKP4-209ENST00000479398 LINC00304Q8N9R0 145 aa12.07□□□□□ -0.48
PKP4-209ENST00000479398 OR13C6PQ8NH95 151 aa12.07□□□□□ -0.48
PKP4-209ENST00000479398 Q9BRP9 147 aa12.07□□□□□ -0.48
PKP4-209ENST00000479398 ZNF73O43830 326 aaPredicted RBP12.06□□□□□ -0.48
PKP4-209ENST00000479398 ERC2-IT1O76042 136 aa12.06□□□□□ -0.48
PKP4-209ENST00000479398 PRR4Q16378 134 aa12.05□□□□□ -0.48
PKP4-209ENST00000479398 LINC00518Q8N0U6 118 aa12.05□□□□□ -0.48
PKP4-209ENST00000479398 JOSD1Q15040 202 aaPredicted RBP12.04□□□□□ -0.48
PKP4-209ENST00000479398 PPDPFQ9H3Y8 114 aa12.04□□□□□ -0.48
PKP4-209ENST00000479398 Q6ZVH6 145 aa12.03□□□□□ -0.48
PKP4-209ENST00000479398 IFITM1P13164 125 aa12.02□□□□□ -0.49
PKP4-209ENST00000479398 HINT1P49773 126 aaPredicted RBP12.02□□□□□ -0.49
PKP4-209ENST00000479398 LINC00483Q53H64 154 aa12.02□□□□□ -0.49
PKP4-209ENST00000479398 GAGE2AQ6NT46 116 aa12.02□□□□□ -0.49
PKP4-209ENST00000479398 COPS9Q8WXC6 57 aa12.02□□□□□ -0.49
PKP4-209ENST00000479398 CTAG1AP78358 180 aa12.01□□□□□ -0.49
PKP4-209ENST00000479398 HSBP1L1C9JCN9 74 aa12□□□□□ -0.49
PKP4-209ENST00000479398 C5orf52A6NGY3 159 aa11.99□□□□□ -0.49
PKP4-209ENST00000479398 MUSTN1Q8IVN3 82 aa11.99□□□□□ -0.49
PKP4-209ENST00000479398 SPAG11AQ6PDA7 123 aa11.98□□□□□ -0.49
PKP4-209ENST00000479398 LPAP08519 4548 aa11.98□□□□□ -0.49
PKP4-209ENST00000479398 SCGB1D1O95968 90 aa11.95□□□□□ -0.5
PKP4-209ENST00000479398 C4orf48Q5BLP8 95 aa11.94□□□□□ -0.5
PKP4-209ENST00000479398 C6orf99Q4VX62 202 aa11.93□□□□□ -0.5
PKP4-209ENST00000479398 Q8NBF4 154 aa11.93□□□□□ -0.5
PKP4-209ENST00000479398 A6NDN8 102 aa11.92□□□□□ -0.5
PKP4-209ENST00000479398 ST20-AS1Q8NBB2 130 aa11.92□□□□□ -0.5
PKP4-209ENST00000479398 COX7BP24311 80 aa11.91□□□□□ -0.5
PKP4-209ENST00000479398 SSBP3-AS1Q7Z2R9 100 aa11.91□□□□□ -0.5
PKP4-209ENST00000479398 RETNLBQ9BQ08 111 aa11.91□□□□□ -0.5
PKP4-209ENST00000479398 DHRS4-AS1Q9P1J3 65 aa11.91□□□□□ -0.5
PKP4-209ENST00000479398 IGLV9-49A0A0B4J1Y8 123 aa11.9□□□□□ -0.5
PKP4-209ENST00000479398 ELOF1P60002 83 aaKnown RBP11.9□□□□□ -0.5
PKP4-209ENST00000479398 MOBPQ13875 183 aa11.89□□□□□ -0.51
PKP4-209ENST00000479398 TRBV7-6A0A0J9YX20 115 aa11.88□□□□□ -0.51
PKP4-209ENST00000479398 TRAV13-2A0A0B4J235 113 aa11.87□□□□□ -0.51
PKP4-209ENST00000479398 SPINK1P00995 79 aa11.86□□□□□ -0.51
PKP4-209ENST00000479398 SPRR1BP22528 89 aa11.84□□□□□ -0.51
PKP4-209ENST00000479398 A0A1B0GWB2 263 aa11.83□□□□□ -0.52
PKP4-209ENST00000479398 COX8AP10176 69 aa11.83□□□□□ -0.52
PKP4-209ENST00000479398 SMIM11BQ8TCY0 68 aa11.82□□□□□ -0.52
PKP4-209ENST00000479398 IGLV7-46A0A075B6I9 117 aa11.81□□□□□ -0.52
PKP4-209ENST00000479398 A4D1N5 150 aa11.81□□□□□ -0.52
PKP4-209ENST00000479398 C9orf153Q5TBE3 101 aa11.81□□□□□ -0.52
PKP4-209ENST00000479398 DLEU1O43261 78 aa11.8□□□□□ -0.52
PKP4-209ENST00000479398 TAL2Q16559 108 aa11.8□□□□□ -0.52
PKP4-209ENST00000479398 SLC25A34Q6PIV7 304 aa11.8□□□□□ -0.52
PKP4-209ENST00000479398 DEFB105AQ8NG35 78 aa11.78□□□□□ -0.52
PKP4-209ENST00000479398 RPS29P62273 56 aaKnown RBP11.77□□□□□ -0.53
PKP4-209ENST00000479398 HIST1H4GQ99525 98 aa11.77□□□□□ -0.53
PKP4-209ENST00000479398 LAMTOR3Q9UHA4 124 aa11.77□□□□□ -0.53
PKP4-209ENST00000479398 C14orf144Q96I85 54 aa11.76□□□□□ -0.53
PKP4-209ENST00000479398 TEX49A0A1B0GTD5 131 aa11.75□□□□□ -0.53
PKP4-209ENST00000479398 TPRXLQ17RH7 258 aa11.75□□□□□ -0.53
PKP4-209ENST00000479398 FP248Q71RG6 208 aaPredicted RBP11.75□□□□□ -0.53
PKP4-209ENST00000479398 PAM16Q9Y3D7 125 aa11.75□□□□□ -0.53
PKP4-209ENST00000479398 VAMP3Q15836 100 aa11.74□□□□□ -0.53
PKP4-209ENST00000479398 SPATA45Q537H7 98 aa11.74□□□□□ -0.53
PKP4-209ENST00000479398 RNF213Q63HN8 5207 aa11.73□□□□□ -0.53
PKP4-209ENST00000479398 Q8N377 158 aa11.72□□□□□ -0.53
PKP4-209ENST00000479398 VAMP8Q9BV40 100 aa11.72□□□□□ -0.53
PKP4-209ENST00000479398 NHP2Q9NX24 153 aaKnown RBP11.72□□□□□ -0.53
PKP4-209ENST00000479398 IGLV5-48A0A075B6I7 105 aa11.71□□□□□ -0.53
PKP4-209ENST00000479398 LINC01547P58512 204 aaPredicted RBP11.71□□□□□ -0.53
PKP4-209ENST00000479398 CDIP1Q9H305 208 aa11.71□□□□□ -0.53
PKP4-209ENST00000479398 Q1RN00 199 aa11.7□□□□□ -0.54
PKP4-209ENST00000479398 HIGD1BQ9P298 99 aa11.7□□□□□ -0.54
PKP4-209ENST00000479398 SLC25A20O43772 301 aa11.69□□□□□ -0.54
PKP4-209ENST00000479398 SMIM29Q86T20 159 aa11.69□□□□□ -0.54
PKP4-209ENST00000479398 C12orf57Q99622 126 aa11.69□□□□□ -0.54
PKP4-209ENST00000479398 LINC00575Q6W349 94 aa11.67□□□□□ -0.54
PKP4-209ENST00000479398 PRO1933Q9H354 126 aa11.65□□□□□ -0.54
PKP4-209ENST00000479398 CFC1BP0CG36 223 aa11.64□□□□□ -0.55
PKP4-209ENST00000479398 CFC1P0CG37 223 aa11.64□□□□□ -0.55
PKP4-209ENST00000479398 HRCT1Q6UXD1 115 aa11.64□□□□□ -0.55
PKP4-209ENST00000479398 C2orf91Q6ZV80 131 aa11.64□□□□□ -0.55
PKP4-209ENST00000479398 hADV29S1A0JD25 119 aa11.63□□□□□ -0.55
PKP4-209ENST00000479398 KRTAP13-3Q3SY46 172 aa11.62□□□□□ -0.55
PKP4-209ENST00000479398 CD164Q04900 197 aa11.61□□□□□ -0.55
PKP4-209ENST00000479398 PYY3Q5JQD4 70 aa11.61□□□□□ -0.55
PKP4-209ENST00000479398 BVES-AS1Q5T3Y7 98 aa11.6□□□□□ -0.55
PKP4-209ENST00000479398 RAB37Q96AX2 223 aa11.59□□□□□ -0.55
PKP4-209ENST00000479398 LIMD2Q9BT23 127 aa11.59□□□□□ -0.55
PKP4-209ENST00000479398 TMA7Q9Y2S6 64 aaKnown RBP11.59□□□□□ -0.55
PKP4-209ENST00000479398 H7C2G1 150 aa11.58□□□□□ -0.56
PKP4-209ENST00000479398 Q6ZQY7 126 aa11.58□□□□□ -0.56
PKP4-209ENST00000479398 CEND1Q8N111 149 aa11.58□□□□□ -0.56
PKP4-209ENST00000479398 A0A0B4J2C4 111 aa11.57□□□□□ -0.56
PKP4-209ENST00000479398 A0A0G2JQZ4 141 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms