RNA–Protein interactions for RNA: ENST00000478997.3

RN7SL549P-201, Transcript of RNA, 7SL, cytoplasmic 549, pseudogene, humanhuman

BASIC

Gene RN7SL549P, Length 282 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL549P-201ENST00000478997 C20orf202A1L168 122 aa4.4□□□□□ -1.71
RN7SL549P-201ENST00000478997 ZNF815PA8K554 130 aa4.4□□□□□ -1.71
RN7SL549P-201ENST00000478997 AKR1D1P51857 326 aa4.4□□□□□ -1.71
RN7SL549P-201ENST00000478997 LINC00308Q8TCZ7 52 aa4.4□□□□□ -1.71
RN7SL549P-201ENST00000478997 Q9BRP9 147 aa4.4□□□□□ -1.71
RN7SL549P-201ENST00000478997 C5orf52A6NGY3 159 aa4.39□□□□□ -1.71
RN7SL549P-201ENST00000478997 ZNF73O43830 326 aaPredicted RBP4.39□□□□□ -1.71
RN7SL549P-201ENST00000478997 KRTDAPP60985 99 aa4.39□□□□□ -1.71
RN7SL549P-201ENST00000478997 NPC2P61916 151 aa4.39□□□□□ -1.71
RN7SL549P-201ENST00000478997 JOSD1Q15040 202 aaPredicted RBP4.39□□□□□ -1.71
RN7SL549P-201ENST00000478997 PPDPFQ9H3Y8 114 aa4.39□□□□□ -1.71
RN7SL549P-201ENST00000478997 MUC2Q02817 5179 aa4.38□□□□□ -1.71
RN7SL549P-201ENST00000478997 ERC2-IT1O76042 136 aa4.38□□□□□ -1.71
RN7SL549P-201ENST00000478997 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
RN7SL549P-201ENST00000478997 SPANXDQ9BXN6 97 aa4.38□□□□□ -1.71
RN7SL549P-201ENST00000478997 TTTY13Q9BZ97 58 aa4.38□□□□□ -1.71
RN7SL549P-201ENST00000478997 SPINK1P00995 79 aa4.37□□□□□ -1.71
RN7SL549P-201ENST00000478997 RPS29P62273 56 aaKnown RBP4.37□□□□□ -1.71
RN7SL549P-201ENST00000478997 ANKRD39Q53RE8 183 aa4.37□□□□□ -1.71
RN7SL549P-201ENST00000478997 GAGE2AQ6NT46 116 aa4.37□□□□□ -1.71
RN7SL549P-201ENST00000478997 FP248Q71RG6 208 aaPredicted RBP4.37□□□□□ -1.71
RN7SL549P-201ENST00000478997 SSBP3-AS1Q7Z2R9 100 aa4.37□□□□□ -1.71
RN7SL549P-201ENST00000478997 LINC00518Q8N0U6 118 aa4.37□□□□□ -1.71
RN7SL549P-201ENST00000478997 Q8NBF4 154 aa4.37□□□□□ -1.71
RN7SL549P-201ENST00000478997 RETNLBQ9BQ08 111 aa4.37□□□□□ -1.71
RN7SL549P-201ENST00000478997 IGLV7-46A0A075B6I9 117 aa4.36□□□□□ -1.71
RN7SL549P-201ENST00000478997 IFITM1P13164 125 aa4.36□□□□□ -1.71
RN7SL549P-201ENST00000478997 HINT1P49773 126 aaPredicted RBP4.36□□□□□ -1.71
RN7SL549P-201ENST00000478997 SNRPEP62304 92 aaKnown RBP4.36□□□□□ -1.71
RN7SL549P-201ENST00000478997 C4orf48Q5BLP8 95 aa4.36□□□□□ -1.71
RN7SL549P-201ENST00000478997 Q6ZVH6 145 aa4.36□□□□□ -1.71
RN7SL549P-201ENST00000478997 COPS9Q8WXC6 57 aa4.36□□□□□ -1.71
RN7SL549P-201ENST00000478997 SPRR1BP22528 89 aa4.35□□□□□ -1.71
RN7SL549P-201ENST00000478997 S100A1P23297 94 aa4.35□□□□□ -1.71
RN7SL549P-201ENST00000478997 MOBPQ13875 183 aa4.35□□□□□ -1.71
RN7SL549P-201ENST00000478997 SCGB1D4Q6XE38 83 aa4.35□□□□□ -1.71
RN7SL549P-201ENST00000478997 HIST3H2BBQ8N257 126 aa4.35□□□□□ -1.71
RN7SL549P-201ENST00000478997 DHRS4-AS1Q9P1J3 65 aa4.35□□□□□ -1.71
RN7SL549P-201ENST00000478997 ELOF1P60002 83 aaKnown RBP4.34□□□□□ -1.71
RN7SL549P-201ENST00000478997 ATOH7Q8N100 152 aa4.34□□□□□ -1.71
RN7SL549P-201ENST00000478997 OR13C6PQ8NH95 151 aa4.34□□□□□ -1.71
RN7SL549P-201ENST00000478997 HIST1H2BLQ99880 126 aa4.34□□□□□ -1.71
RN7SL549P-201ENST00000478997 IGLV9-49A0A0B4J1Y8 123 aa4.33□□□□□ -1.72
RN7SL549P-201ENST00000478997 TRBV7-6A0A0J9YX20 115 aa4.33□□□□□ -1.72
RN7SL549P-201ENST00000478997 PCP2Q8IVA1 136 aa4.33□□□□□ -1.72
RN7SL549P-201ENST00000478997 ST20-AS1Q8NBB2 130 aa4.33□□□□□ -1.72
RN7SL549P-201ENST00000478997 COX7BP24311 80 aa4.32□□□□□ -1.72
RN7SL549P-201ENST00000478997 S100A2P29034 98 aa4.32□□□□□ -1.72
RN7SL549P-201ENST00000478997 C6orf99Q4VX62 202 aa4.32□□□□□ -1.72
RN7SL549P-201ENST00000478997 SLC25A34Q6PIV7 304 aa4.32□□□□□ -1.72
RN7SL549P-201ENST00000478997 Q8N377 158 aa4.32□□□□□ -1.72
RN7SL549P-201ENST00000478997 CDIP1Q9H305 208 aa4.32□□□□□ -1.72
RN7SL549P-201ENST00000478997 KRTAP13-3Q3SY46 172 aa4.31□□□□□ -1.72
RN7SL549P-201ENST00000478997 MUSTN1Q8IVN3 82 aa4.31□□□□□ -1.72
RN7SL549P-201ENST00000478997 FAT4Q6V0I7 4981 aa4.3□□□□□ -1.72
RN7SL549P-201ENST00000478997 TRAV13-2A0A0B4J235 113 aa4.3□□□□□ -1.72
RN7SL549P-201ENST00000478997 A0A0U1RQV1 116 aa4.3□□□□□ -1.72
RN7SL549P-201ENST00000478997 A0A1B0GWB2 263 aa4.3□□□□□ -1.72
RN7SL549P-201ENST00000478997 SLC25A20O43772 301 aa4.3□□□□□ -1.72
RN7SL549P-201ENST00000478997 S100A6P06703 90 aa4.3□□□□□ -1.72
RN7SL549P-201ENST00000478997 C9orf153Q5TBE3 101 aa4.3□□□□□ -1.72
RN7SL549P-201ENST00000478997 A4D1N5 150 aa4.29□□□□□ -1.72
RN7SL549P-201ENST00000478997 HSBP1L1C9JCN9 74 aa4.29□□□□□ -1.72
RN7SL549P-201ENST00000478997 IGLV5-48A0A075B6I7 105 aa4.28□□□□□ -1.72
RN7SL549P-201ENST00000478997 TEX49A0A1B0GTD5 131 aa4.28□□□□□ -1.72
RN7SL549P-201ENST00000478997 A6NDN8 102 aa4.28□□□□□ -1.72
RN7SL549P-201ENST00000478997 LAMTOR3Q9UHA4 124 aa4.28□□□□□ -1.72
RN7SL549P-201ENST00000478997 LINC01547P58512 204 aaPredicted RBP4.27□□□□□ -1.73
RN7SL549P-201ENST00000478997 CD164Q04900 197 aa4.27□□□□□ -1.73
RN7SL549P-201ENST00000478997 SMIM11BQ8TCY0 68 aa4.27□□□□□ -1.73
RN7SL549P-201ENST00000478997 LIMD2Q9BT23 127 aa4.27□□□□□ -1.73
RN7SL549P-201ENST00000478997 NHP2Q9NX24 153 aaKnown RBP4.27□□□□□ -1.73
RN7SL549P-201ENST00000478997 TAL2Q16559 108 aa4.26□□□□□ -1.73
RN7SL549P-201ENST00000478997 SMIM29Q86T20 159 aa4.26□□□□□ -1.73
RN7SL549P-201ENST00000478997 DLEU1O43261 78 aa4.25□□□□□ -1.73
RN7SL549P-201ENST00000478997 ASB16-AS1Q495Z4 193 aa4.25□□□□□ -1.73
RN7SL549P-201ENST00000478997 Q5XG85 94 aa4.25□□□□□ -1.73
RN7SL549P-201ENST00000478997 PRO1933Q9H354 126 aa4.25□□□□□ -1.73
RN7SL549P-201ENST00000478997 SCGB1D1O95968 90 aa4.24□□□□□ -1.73
RN7SL549P-201ENST00000478997 COX8AP10176 69 aa4.24□□□□□ -1.73
RN7SL549P-201ENST00000478997 Q1RN00 199 aa4.24□□□□□ -1.73
RN7SL549P-201ENST00000478997 XP32Q5T750 250 aa4.24□□□□□ -1.73
RN7SL549P-201ENST00000478997 DEFB105AQ8NG35 78 aa4.24□□□□□ -1.73
RN7SL549P-201ENST00000478997 VAMP3Q15836 100 aa4.23□□□□□ -1.73
RN7SL549P-201ENST00000478997 LCE2AQ5TA79 106 aaPredicted RBP4.23□□□□□ -1.73
RN7SL549P-201ENST00000478997 LINC00575Q6W349 94 aa4.23□□□□□ -1.73
RN7SL549P-201ENST00000478997 H7C2G1 150 aa4.22□□□□□ -1.73
RN7SL549P-201ENST00000478997 SEC61BP60468 96 aaKnown RBP4.22□□□□□ -1.73
RN7SL549P-201ENST00000478997 HRCT1Q6UXD1 115 aa4.21□□□□□ -1.74
RN7SL549P-201ENST00000478997 HIST1H4GQ99525 98 aa4.21□□□□□ -1.74
RN7SL549P-201ENST00000478997 HIGD1BQ9P298 99 aa4.21□□□□□ -1.74
RN7SL549P-201ENST00000478997 IGLV8-61A0A075B6I0 122 aa4.2□□□□□ -1.74
RN7SL549P-201ENST00000478997 hADV29S1A0JD25 119 aa4.2□□□□□ -1.74
RN7SL549P-201ENST00000478997 BVES-AS1Q5T3Y7 98 aa4.2□□□□□ -1.74
RN7SL549P-201ENST00000478997 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.2□□□□□ -1.74
RN7SL549P-201ENST00000478997 Q6ZQY7 126 aa4.2□□□□□ -1.74
RN7SL549P-201ENST00000478997 PPDPFLQ8WWR9 84 aa4.2□□□□□ -1.74
RN7SL549P-201ENST00000478997 A0A0B4J2C4 111 aa4.18□□□□□ -1.74
RN7SL549P-201ENST00000478997 F8WEM9 126 aa4.18□□□□□ -1.74
RN7SL549P-201ENST00000478997 SPATA45Q537H7 98 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms