RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 SPRR4Q96PI1 79 aa9.22□□□□□ -0.93
GARNL3-215ENST00000478702 S100A2P29034 98 aa9.21□□□□□ -0.94
GARNL3-215ENST00000478702 ZNF706Q9Y5V0 76 aaPredicted RBP9.21□□□□□ -0.94
GARNL3-215ENST00000478702 ANKRD39Q53RE8 183 aa9.2□□□□□ -0.94
GARNL3-215ENST00000478702 S100A7L2Q5SY68 101 aa9.2□□□□□ -0.94
GARNL3-215ENST00000478702 LINC00308Q8TCZ7 52 aa9.2□□□□□ -0.94
GARNL3-215ENST00000478702 SMCR5Q8TEV8 140 aa9.2□□□□□ -0.94
GARNL3-215ENST00000478702 B5MCH6 92 aa9.19□□□□□ -0.94
GARNL3-215ENST00000478702 HIST3H2BBQ8N257 126 aa9.19□□□□□ -0.94
GARNL3-215ENST00000478702 SPANXCQ9NY87 97 aa9.19□□□□□ -0.94
GARNL3-215ENST00000478702 TRAV23DV6A0A075B6W5 121 aa9.18□□□□□ -0.94
GARNL3-215ENST00000478702 S100A6P06703 90 aa9.18□□□□□ -0.94
GARNL3-215ENST00000478702 ATOH7Q8N100 152 aa9.18□□□□□ -0.94
GARNL3-215ENST00000478702 TSPAN13O95857 204 aa9.17□□□□□ -0.94
GARNL3-215ENST00000478702 SCGB1D4Q6XE38 83 aa9.17□□□□□ -0.94
GARNL3-215ENST00000478702 Q6ZRX8 168 aa9.17□□□□□ -0.94
GARNL3-215ENST00000478702 C3orf22Q8N5N4 141 aa9.17□□□□□ -0.94
GARNL3-215ENST00000478702 LINC00304Q8N9R0 145 aa9.17□□□□□ -0.94
GARNL3-215ENST00000478702 HIST1H2BLQ99880 126 aa9.17□□□□□ -0.94
GARNL3-215ENST00000478702 KRTAP9-6A0A140TA67 174 aa9.16□□□□□ -0.94
GARNL3-215ENST00000478702 MUC17Q685J3 4493 aa9.16□□□□□ -0.94
GARNL3-215ENST00000478702 Q9BRP9 147 aa9.15□□□□□ -0.94
GARNL3-215ENST00000478702 SPANXDQ9BXN6 97 aa9.15□□□□□ -0.94
GARNL3-215ENST00000478702 ZNF73O43830 326 aaPredicted RBP9.14□□□□□ -0.95
GARNL3-215ENST00000478702 SNRPEP62304 92 aaKnown RBP9.14□□□□□ -0.95
GARNL3-215ENST00000478702 LINC00483Q53H64 154 aa9.14□□□□□ -0.95
GARNL3-215ENST00000478702 CBY1Q9Y3M2 126 aa9.14□□□□□ -0.95
GARNL3-215ENST00000478702 ERC2-IT1O76042 136 aa9.13□□□□□ -0.95
GARNL3-215ENST00000478702 PCP2Q8IVA1 136 aa9.12□□□□□ -0.95
GARNL3-215ENST00000478702 COPS9Q8WXC6 57 aa9.12□□□□□ -0.95
GARNL3-215ENST00000478702 PPDPFQ9H3Y8 114 aa9.12□□□□□ -0.95
GARNL3-215ENST00000478702 CTAG1AP78358 180 aa9.11□□□□□ -0.95
GARNL3-215ENST00000478702 OR13C6PQ8NH95 151 aa9.11□□□□□ -0.95
GARNL3-215ENST00000478702 HSBP1L1C9JCN9 74 aa9.1□□□□□ -0.95
GARNL3-215ENST00000478702 JOSD1Q15040 202 aaPredicted RBP9.1□□□□□ -0.95
GARNL3-215ENST00000478702 HINT1P49773 126 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-215ENST00000478702 LINC00518Q8N0U6 118 aa9.09□□□□□ -0.95
GARNL3-215ENST00000478702 IFITM1P13164 125 aa9.08□□□□□ -0.96
GARNL3-215ENST00000478702 GAGE2AQ6NT46 116 aa9.08□□□□□ -0.96
GARNL3-215ENST00000478702 Q6ZVH6 145 aa9.08□□□□□ -0.96
GARNL3-215ENST00000478702 Q8NBF4 154 aa9.06□□□□□ -0.96
GARNL3-215ENST00000478702 SPAG11AQ6PDA7 123 aa9.05□□□□□ -0.96
GARNL3-215ENST00000478702 RETNLBQ9BQ08 111 aa9.05□□□□□ -0.96
GARNL3-215ENST00000478702 SCGB1D1O95968 90 aa9.04□□□□□ -0.96
GARNL3-215ENST00000478702 C5orf52A6NGY3 159 aa9.03□□□□□ -0.96
GARNL3-215ENST00000478702 ELOF1P60002 83 aaKnown RBP9.03□□□□□ -0.96
GARNL3-215ENST00000478702 MOBPQ13875 183 aa9.03□□□□□ -0.96
GARNL3-215ENST00000478702 MUSTN1Q8IVN3 82 aa9.03□□□□□ -0.96
GARNL3-215ENST00000478702 IGLV9-49A0A0B4J1Y8 123 aa9.02□□□□□ -0.97
GARNL3-215ENST00000478702 C6orf99Q4VX62 202 aa9.02□□□□□ -0.97
GARNL3-215ENST00000478702 ST20-AS1Q8NBB2 130 aa9.02□□□□□ -0.97
GARNL3-215ENST00000478702 DHRS4-AS1Q9P1J3 65 aa9.02□□□□□ -0.97
GARNL3-215ENST00000478702 COX7BP24311 80 aa9.01□□□□□ -0.97
GARNL3-215ENST00000478702 C4orf48Q5BLP8 95 aa9.01□□□□□ -0.97
GARNL3-215ENST00000478702 A6NDN8 102 aa9□□□□□ -0.97
GARNL3-215ENST00000478702 TPRXLQ17RH7 258 aa8.99□□□□□ -0.97
GARNL3-215ENST00000478702 SSBP3-AS1Q7Z2R9 100 aa8.99□□□□□ -0.97
GARNL3-215ENST00000478702 TRBV7-6A0A0J9YX20 115 aa8.98□□□□□ -0.97
GARNL3-215ENST00000478702 SPRR1BP22528 89 aa8.98□□□□□ -0.97
GARNL3-215ENST00000478702 TRAV13-2A0A0B4J235 113 aa8.97□□□□□ -0.97
GARNL3-215ENST00000478702 A0A1B0GWB2 263 aa8.97□□□□□ -0.97
GARNL3-215ENST00000478702 SPINK1P00995 79 aa8.97□□□□□ -0.97
GARNL3-215ENST00000478702 CDIP1Q9H305 208 aa8.97□□□□□ -0.97
GARNL3-215ENST00000478702 RPS29P62273 56 aaKnown RBP8.96□□□□□ -0.98
GARNL3-215ENST00000478702 C9orf153Q5TBE3 101 aa8.96□□□□□ -0.98
GARNL3-215ENST00000478702 IGLV7-46A0A075B6I9 117 aa8.95□□□□□ -0.98
GARNL3-215ENST00000478702 FP248Q71RG6 208 aaPredicted RBP8.94□□□□□ -0.98
GARNL3-215ENST00000478702 COX8AP10176 69 aa8.93□□□□□ -0.98
GARNL3-215ENST00000478702 SLC25A34Q6PIV7 304 aa8.93□□□□□ -0.98
GARNL3-215ENST00000478702 A4D1N5 150 aa8.92□□□□□ -0.98
GARNL3-215ENST00000478702 SMIM11BQ8TCY0 68 aa8.92□□□□□ -0.98
GARNL3-215ENST00000478702 DLEU1O43261 78 aa8.9□□□□□ -0.98
GARNL3-215ENST00000478702 Q8N377 158 aa8.9□□□□□ -0.98
GARNL3-215ENST00000478702 HIST1H4GQ99525 98 aa8.9□□□□□ -0.98
GARNL3-215ENST00000478702 TAL2Q16559 108 aa8.89□□□□□ -0.99
GARNL3-215ENST00000478702 VAMP8Q9BV40 100 aa8.89□□□□□ -0.99
GARNL3-215ENST00000478702 LAMTOR3Q9UHA4 124 aa8.89□□□□□ -0.99
GARNL3-215ENST00000478702 IGLV5-48A0A075B6I7 105 aa8.88□□□□□ -0.99
GARNL3-215ENST00000478702 TEX49A0A1B0GTD5 131 aa8.88□□□□□ -0.99
GARNL3-215ENST00000478702 LINC01547P58512 204 aaPredicted RBP8.88□□□□□ -0.99
GARNL3-215ENST00000478702 SPATA45Q537H7 98 aa8.88□□□□□ -0.99
GARNL3-215ENST00000478702 NHP2Q9NX24 153 aaKnown RBP8.88□□□□□ -0.99
GARNL3-215ENST00000478702 PAM16Q9Y3D7 125 aa8.88□□□□□ -0.99
GARNL3-215ENST00000478702 VAMP3Q15836 100 aa8.87□□□□□ -0.99
GARNL3-215ENST00000478702 DEFB105AQ8NG35 78 aa8.87□□□□□ -0.99
GARNL3-215ENST00000478702 C14orf144Q96I85 54 aa8.87□□□□□ -0.99
GARNL3-215ENST00000478702 SLC25A20O43772 301 aa8.86□□□□□ -0.99
GARNL3-215ENST00000478702 Q1RN00 199 aa8.86□□□□□ -0.99
GARNL3-215ENST00000478702 KRTAP13-3Q3SY46 172 aa8.85□□□□□ -0.99
GARNL3-215ENST00000478702 SMIM29Q86T20 159 aa8.85□□□□□ -0.99
GARNL3-215ENST00000478702 C12orf57Q99622 126 aa8.84□□□□□ -0.99
GARNL3-215ENST00000478702 KRTAP4-1Q9BYQ7 146 aa8.83□□□□□ -1
GARNL3-215ENST00000478702 HIGD1BQ9P298 99 aa8.83□□□□□ -1
GARNL3-215ENST00000478702 LINC00575Q6W349 94 aa8.81□□□□□ -1
GARNL3-215ENST00000478702 C2orf91Q6ZV80 131 aa8.81□□□□□ -1
GARNL3-215ENST00000478702 LIMD2Q9BT23 127 aa8.81□□□□□ -1
GARNL3-215ENST00000478702 PRO1933Q9H354 126 aa8.8□□□□□ -1
GARNL3-215ENST00000478702 CD164Q04900 197 aa8.79□□□□□ -1
GARNL3-215ENST00000478702 ASB16-AS1Q495Z4 193 aa8.79□□□□□ -1
GARNL3-215ENST00000478702 HRCT1Q6UXD1 115 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms