RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 NKAPP1Q8N9T2 125 aa6.82□□□□□ -1.32
VARS2-208ENST00000477052 DPM2O94777 84 aa6.81□□□□□ -1.32
VARS2-208ENST00000477052 PRLHP81277 87 aa6.81□□□□□ -1.32
VARS2-208ENST00000477052 IGLV5-37A0A075B6J1 123 aa6.8□□□□□ -1.32
VARS2-208ENST00000477052 C2orf91Q6ZV80 131 aa6.8□□□□□ -1.32
VARS2-208ENST00000477052 Q8NDZ9 215 aa6.8□□□□□ -1.32
VARS2-208ENST00000477052 ZNF625Q96I27 306 aaPredicted RBP6.8□□□□□ -1.32
VARS2-208ENST00000477052 IGKCP01834 107 aa6.79□□□□□ -1.32
VARS2-208ENST00000477052 RPL24P83731 157 aaKnown RBP6.79□□□□□ -1.32
VARS2-208ENST00000477052 LYRM7Q5U5X0 104 aa6.79□□□□□ -1.32
VARS2-208ENST00000477052 SFTA2Q6UW10 78 aa6.79□□□□□ -1.32
VARS2-208ENST00000477052 FAM19A1Q7Z5A9 133 aa6.78□□□□□ -1.32
VARS2-208ENST00000477052 SND1-IT1Q9HBX3 110 aa6.78□□□□□ -1.32
VARS2-208ENST00000477052 VPREB1P12018 145 aa6.77□□□□□ -1.33
VARS2-208ENST00000477052 NMUP48645 174 aa6.77□□□□□ -1.33
VARS2-208ENST00000477052 HERVK_113P61574 105 aa6.77□□□□□ -1.33
VARS2-208ENST00000477052 LINC00304Q8N9R0 145 aa6.77□□□□□ -1.33
VARS2-208ENST00000477052 TMEM238LA0A1B0GVL6 79 aa6.76□□□□□ -1.33
VARS2-208ENST00000477052 A6NJY4 79 aa6.76□□□□□ -1.33
VARS2-208ENST00000477052 TMEM126AQ9H061 195 aa6.76□□□□□ -1.33
VARS2-208ENST00000477052 ERG28Q9UKR5 140 aa6.76□□□□□ -1.33
VARS2-208ENST00000477052 IGKV2D-26A0A0A0MRZ7 120 aa6.75□□□□□ -1.33
VARS2-208ENST00000477052 M0R378 163 aa6.75□□□□□ -1.33
VARS2-208ENST00000477052 LEPROTO15243 131 aa6.75□□□□□ -1.33
VARS2-208ENST00000477052 C3orf22Q8N5N4 141 aa6.75□□□□□ -1.33
VARS2-208ENST00000477052 SVIPQ8NHG7 77 aa6.75□□□□□ -1.33
VARS2-208ENST00000477052 RAB37Q96AX2 223 aa6.75□□□□□ -1.33
VARS2-208ENST00000477052 PLEKHB2Q96CS7 222 aa6.75□□□□□ -1.33
VARS2-208ENST00000477052 A0A0U1RRA0 63 aa6.74□□□□□ -1.33
VARS2-208ENST00000477052 HERV-K104P63124 156 aa6.74□□□□□ -1.33
VARS2-208ENST00000477052 COX17Q14061 63 aa6.74□□□□□ -1.33
VARS2-208ENST00000477052 FAM229BQ4G0N7 80 aa6.74□□□□□ -1.33
VARS2-208ENST00000477052 CEND1Q8N111 149 aa6.74□□□□□ -1.33
VARS2-208ENST00000477052 FAT4Q6V0I7 4981 aa6.74□□□□□ -1.33
VARS2-208ENST00000477052 E9PLD3 99 aa6.73□□□□□ -1.33
VARS2-208ENST00000477052 J3QQQ9 107 aa6.73□□□□□ -1.33
VARS2-208ENST00000477052 TSPEAR-AS2P59090 65 aa6.73□□□□□ -1.33
VARS2-208ENST00000477052 NDUFA12Q9UI09 145 aa6.73□□□□□ -1.33
VARS2-208ENST00000477052 MYMXA0A1B0GTQ4 84 aa6.72□□□□□ -1.33
VARS2-208ENST00000477052 HIGD2AQ9BW72 106 aa6.72□□□□□ -1.33
VARS2-208ENST00000477052 IGLV7-46A0A075B6I9 117 aa6.71□□□□□ -1.34
VARS2-208ENST00000477052 A0A0U1RQV1 116 aa6.71□□□□□ -1.34
VARS2-208ENST00000477052 LGALS3P17931 250 aaKnown RBP6.71□□□□□ -1.34
VARS2-208ENST00000477052 KRTAP9-2Q9BYQ4 174 aa6.71□□□□□ -1.34
VARS2-208ENST00000477052 CDIP1Q9H305 208 aa6.71□□□□□ -1.34
VARS2-208ENST00000477052 LINC00158P58513 81 aa6.7□□□□□ -1.34
VARS2-208ENST00000477052 MEIG1Q5JSS6 88 aa6.7□□□□□ -1.34
VARS2-208ENST00000477052 HIST1H4GQ99525 98 aa6.7□□□□□ -1.34
VARS2-208ENST00000477052 NHP2Q9NX24 153 aaKnown RBP6.7□□□□□ -1.34
VARS2-208ENST00000477052 MUC17Q685J3 4493 aa6.7□□□□□ -1.34
VARS2-208ENST00000477052 LCE2AQ5TA79 106 aaPredicted RBP6.69□□□□□ -1.34
VARS2-208ENST00000477052 PCP2Q8IVA1 136 aa6.68□□□□□ -1.34
VARS2-208ENST00000477052 SPANXB1Q9NS25 103 aaPredicted RBP6.68□□□□□ -1.34
VARS2-208ENST00000477052 TRBV20-1A0A075B6N2 111 aa6.67□□□□□ -1.34
VARS2-208ENST00000477052 H3BMG7 143 aa6.67□□□□□ -1.34
VARS2-208ENST00000477052 NCR3O14931 201 aa6.67□□□□□ -1.34
VARS2-208ENST00000477052 DAND5Q8N907 189 aa6.67□□□□□ -1.34
VARS2-208ENST00000477052 SPRR4Q96PI1 79 aa6.67□□□□□ -1.34
VARS2-208ENST00000477052 PPDPFQ9H3Y8 114 aa6.67□□□□□ -1.34
VARS2-208ENST00000477052 A0A1B0GWB2 263 aa6.66□□□□□ -1.34
VARS2-208ENST00000477052 FXYD2P54710 66 aa6.66□□□□□ -1.34
VARS2-208ENST00000477052 TPRXLQ17RH7 258 aa6.66□□□□□ -1.34
VARS2-208ENST00000477052 MIR7-3HGQ8N6C7 128 aa6.66□□□□□ -1.34
VARS2-208ENST00000477052 A0A0J9YXY3 114 aa6.65□□□□□ -1.34
VARS2-208ENST00000477052 NAA38Q9BRA0 125 aaKnown RBP6.65□□□□□ -1.34
VARS2-208ENST00000477052 ZNF815PA8K554 130 aa6.64□□□□□ -1.35
VARS2-208ENST00000477052 Q8NBF4 154 aa6.64□□□□□ -1.35
VARS2-208ENST00000477052 LOC107984156A0A0G2JMH3 177 aa6.63□□□□□ -1.35
VARS2-208ENST00000477052 TIMM17BO60830 172 aa6.63□□□□□ -1.35
VARS2-208ENST00000477052 ARL17AQ8IVW1 177 aa6.63□□□□□ -1.35
VARS2-208ENST00000477052 SMCR5Q8TEV8 140 aa6.63□□□□□ -1.35
VARS2-208ENST00000477052 PPDPFLQ8WWR9 84 aa6.63□□□□□ -1.35
VARS2-208ENST00000477052 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
VARS2-208ENST00000477052 TTTY13Q9BZ97 58 aa6.63□□□□□ -1.35
VARS2-208ENST00000477052 ETDBQ3ZM63 59 aa6.62□□□□□ -1.35
VARS2-208ENST00000477052 TRBV10-3A0A0K0K1G6 114 aa6.61□□□□□ -1.35
VARS2-208ENST00000477052 SCGB1D4Q6XE38 83 aa6.61□□□□□ -1.35
VARS2-208ENST00000477052 LITAFQ99732 161 aa6.61□□□□□ -1.35
VARS2-208ENST00000477052 PRYO14603 147 aa6.6□□□□□ -1.35
VARS2-208ENST00000477052 C4orf48Q5BLP8 95 aa6.6□□□□□ -1.35
VARS2-208ENST00000477052 ADAMTSL4-AS1Q5T5F5 129 aa6.6□□□□□ -1.35
VARS2-208ENST00000477052 ETDCA0A1B0GVM5 59 aa6.59□□□□□ -1.35
VARS2-208ENST00000477052 KRTAP4-16G5E9R7 235 aaPredicted RBP6.59□□□□□ -1.35
VARS2-208ENST00000477052 K7ERJ3 54 aa6.59□□□□□ -1.35
VARS2-208ENST00000477052 ERC2-IT1O76042 136 aa6.59□□□□□ -1.35
VARS2-208ENST00000477052 SCGB1C2P0DMR2 95 aa6.59□□□□□ -1.35
VARS2-208ENST00000477052 SPRR1AP35321 89 aa6.59□□□□□ -1.35
VARS2-208ENST00000477052 GAGE2AQ6NT46 116 aa6.59□□□□□ -1.35
VARS2-208ENST00000477052 SPAG11AQ6PDA7 123 aa6.59□□□□□ -1.35
VARS2-208ENST00000477052 TEN1Q86WV5 123 aa6.59□□□□□ -1.35
VARS2-208ENST00000477052 KCNQ1DNQ9H478 68 aa6.59□□□□□ -1.35
VARS2-208ENST00000477052 ZNF706Q9Y5V0 76 aaPredicted RBP6.59□□□□□ -1.35
VARS2-208ENST00000477052 IGLV9-49A0A0B4J1Y8 123 aa6.58□□□□□ -1.36
VARS2-208ENST00000477052 NDUFC2O95298 119 aa6.58□□□□□ -1.36
VARS2-208ENST00000477052 PSMB2P49721 201 aa6.58□□□□□ -1.36
VARS2-208ENST00000477052 KRTAP13-3Q3SY46 172 aa6.58□□□□□ -1.36
VARS2-208ENST00000477052 SOSTDC1Q6X4U4 206 aa6.58□□□□□ -1.36
VARS2-208ENST00000477052 LINC00337Q8N6G1 96 aa6.58□□□□□ -1.36
VARS2-208ENST00000477052 KRTAP4-1Q9BYQ7 146 aa6.58□□□□□ -1.36
VARS2-208ENST00000477052 MOBPQ13875 183 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms