RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 CASC2Q6XLA1 102 aa5.58□□□□□ -1.52
CNTNAP3B-205ENST00000476961 LINC00476Q8WZB0 136 aa5.58□□□□□ -1.52
CNTNAP3B-205ENST00000476961 IGLV4-60A0A075B6I1 120 aa5.58□□□□□ -1.52
CNTNAP3B-205ENST00000476961 SMIM1B2RUZ4 78 aa5.58□□□□□ -1.52
CNTNAP3B-205ENST00000476961 C19orf73Q9NVV2 129 aa5.58□□□□□ -1.52
CNTNAP3B-205ENST00000476961 WNK1Q9H4A3 2382 aa5.57□□□□□ -1.52
CNTNAP3B-205ENST00000476961 IGHV3OR16-9A0A0B4J2B5 98 aa5.57□□□□□ -1.52
CNTNAP3B-205ENST00000476961 COX6A2Q02221 97 aa5.57□□□□□ -1.52
CNTNAP3B-205ENST00000476961 B9D2Q9BPU9 175 aa5.57□□□□□ -1.52
CNTNAP3B-205ENST00000476961 ATRQ13535 2644 aa5.57□□□□□ -1.52
CNTNAP3B-205ENST00000476961 LINC00612Q8N6U2 182 aa5.57□□□□□ -1.52
CNTNAP3B-205ENST00000476961 Q8N9L7 120 aa5.57□□□□□ -1.52
CNTNAP3B-205ENST00000476961 Q9BRP9 147 aa5.57□□□□□ -1.52
CNTNAP3B-205ENST00000476961 FAM74A4Q5TZK3 123 aa5.56□□□□□ -1.52
CNTNAP3B-205ENST00000476961 X6R8D5 127 aa5.56□□□□□ -1.52
CNTNAP3B-205ENST00000476961 CCL18P55774 89 aa5.56□□□□□ -1.52
CNTNAP3B-205ENST00000476961 LINC00208Q96KT6 92 aa5.56□□□□□ -1.52
CNTNAP3B-205ENST00000476961 FAM30AQ9NZY2 134 aa5.56□□□□□ -1.52
CNTNAP3B-205ENST00000476961 K7EQD1 137 aa5.55□□□□□ -1.52
CNTNAP3B-205ENST00000476961 VWFP04275 2813 aa5.55□□□□□ -1.52
CNTNAP3B-205ENST00000476961 NDUFB1O75438 58 aa5.55□□□□□ -1.52
CNTNAP3B-205ENST00000476961 IGLV1-51P01701 117 aa5.55□□□□□ -1.52
CNTNAP3B-205ENST00000476961 DEFB114Q30KQ6 69 aa5.55□□□□□ -1.52
CNTNAP3B-205ENST00000476961 FBN1P35555 2871 aaKnown RBP5.54□□□□□ -1.52
CNTNAP3B-205ENST00000476961 A0A087X002 238 aa5.54□□□□□ -1.52
CNTNAP3B-205ENST00000476961 IGHV3-53P01767 116 aa5.54□□□□□ -1.52
CNTNAP3B-205ENST00000476961 MUC7Q8TAX7 377 aa5.54□□□□□ -1.52
CNTNAP3B-205ENST00000476961 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.54□□□□□ -1.52
CNTNAP3B-205ENST00000476961 TRBV6-4A0A1B0GX49 114 aa5.54□□□□□ -1.52
CNTNAP3B-205ENST00000476961 KRTAP24-1Q3LI83 254 aa5.54□□□□□ -1.52
CNTNAP3B-205ENST00000476961 LINC00242Q5T6M2 205 aa5.54□□□□□ -1.52
CNTNAP3B-205ENST00000476961 Q8NAQ8 132 aa5.54□□□□□ -1.52
CNTNAP3B-205ENST00000476961 CHCHD7Q9BUK0 85 aa5.53□□□□□ -1.52
CNTNAP3B-205ENST00000476961 REG3AQ06141 175 aa5.52□□□□□ -1.53
CNTNAP3B-205ENST00000476961 SMIM29Q86T20 159 aa5.52□□□□□ -1.53
CNTNAP3B-205ENST00000476961 HIGD2BQ4VC39 106 aa5.52□□□□□ -1.53
CNTNAP3B-205ENST00000476961 COX7B2Q8TF08 81 aa5.52□□□□□ -1.53
CNTNAP3B-205ENST00000476961 IGHV3-73A0A0B4J1V6 119 aa5.51□□□□□ -1.53
CNTNAP3B-205ENST00000476961 PLAC8Q9NZF1 115 aa5.51□□□□□ -1.53
CNTNAP3B-205ENST00000476961 IGHV3OR16-12A0A075B7B8 117 aa5.51□□□□□ -1.53
CNTNAP3B-205ENST00000476961 TRGV2A0A075B6R0 118 aa5.5□□□□□ -1.53
CNTNAP3B-205ENST00000476961 DEFB131AP59861 70 aa5.5□□□□□ -1.53
CNTNAP3B-205ENST00000476961 SPINK7P58062 85 aa5.5□□□□□ -1.53
CNTNAP3B-205ENST00000476961 MAP6D1Q9H9H5 199 aa5.5□□□□□ -1.53
CNTNAP3B-205ENST00000476961 SPANXA2-OT1Q8N9U9 137 aa5.49□□□□□ -1.53
CNTNAP3B-205ENST00000476961 TRRAPQ9Y4A5 3859 aa5.49□□□□□ -1.53
CNTNAP3B-205ENST00000476961 IGKV3-20P01619 116 aa5.49□□□□□ -1.53
CNTNAP3B-205ENST00000476961 LINC00158P58513 81 aa5.49□□□□□ -1.53
CNTNAP3B-205ENST00000476961 ODF3L2Q3SX64 289 aa5.49□□□□□ -1.53
CNTNAP3B-205ENST00000476961 C10orf25Q5T742 122 aa5.49□□□□□ -1.53
CNTNAP3B-205ENST00000476961 LINC00467Q9BRT7 94 aa5.49□□□□□ -1.53
CNTNAP3B-205ENST00000476961 LINC01558Q9Y6Z2 57 aa5.49□□□□□ -1.53
CNTNAP3B-205ENST00000476961 STAB1Q9NY15 2570 aa5.49□□□□□ -1.53
CNTNAP3B-205ENST00000476961 ETDCA0A1B0GVM5 59 aa5.48□□□□□ -1.53
CNTNAP3B-205ENST00000476961 RTL8CO15255 209 aa5.48□□□□□ -1.53
CNTNAP3B-205ENST00000476961 C1orf134Q5TEV5 83 aa5.48□□□□□ -1.53
CNTNAP3B-205ENST00000476961 ST20-AS1Q8NBB2 130 aa5.48□□□□□ -1.53
CNTNAP3B-205ENST00000476961 A0A1W2PNM2 257 aa5.47□□□□□ -1.53
CNTNAP3B-205ENST00000476961 A8MTW9 85 aa5.47□□□□□ -1.53
CNTNAP3B-205ENST00000476961 LINC00575Q6W349 94 aa5.47□□□□□ -1.53
CNTNAP3B-205ENST00000476961 COL6A5A8TX70 2615 aa5.47□□□□□ -1.53
CNTNAP3B-205ENST00000476961 NOTCH3Q9UM47 2321 aa5.47□□□□□ -1.53
CNTNAP3B-205ENST00000476961 IGHV3-16A0A0C4DH30 117 aa5.46□□□□□ -1.53
CNTNAP3B-205ENST00000476961 SPINK13Q1W4C9 94 aa5.46□□□□□ -1.53
CNTNAP3B-205ENST00000476961 H3BQ85 93 aa5.45□□□□□ -1.54
CNTNAP3B-205ENST00000476961 CNBPP62633 177 aaKnown RBP5.45□□□□□ -1.54
CNTNAP3B-205ENST00000476961 CHCHD10Q8WYQ3 142 aaPredicted RBP5.45□□□□□ -1.54
CNTNAP3B-205ENST00000476961 WFDC10AQ9H1F0 79 aa5.45□□□□□ -1.54
CNTNAP3B-205ENST00000476961 COX7BP24311 80 aa5.44□□□□□ -1.54
CNTNAP3B-205ENST00000476961 ROMO1P60602 79 aa5.44□□□□□ -1.54
CNTNAP3B-205ENST00000476961 CSAG1Q6PB30 78 aa5.44□□□□□ -1.54
CNTNAP3B-205ENST00000476961 CMC4P56277 68 aaPredicted RBP5.44□□□□□ -1.54
CNTNAP3B-205ENST00000476961 PKD1L1Q8TDX9 2849 aa5.43□□□□□ -1.54
CNTNAP3B-205ENST00000476961 CMYA5Q8N3K9 4069 aa5.43□□□□□ -1.54
CNTNAP3B-205ENST00000476961 Q6ZR54 194 aa5.43□□□□□ -1.54
CNTNAP3B-205ENST00000476961 KCNQ1DNQ9H478 68 aa5.43□□□□□ -1.54
CNTNAP3B-205ENST00000476961 ANK2Q01484 3957 aa5.42□□□□□ -1.54
CNTNAP3B-205ENST00000476961 NOTCH2NLQ7Z3S9 236 aa5.42□□□□□ -1.54
CNTNAP3B-205ENST00000476961 COA5Q86WW8 74 aa5.42□□□□□ -1.54
CNTNAP3B-205ENST00000476961 GIG44P09565 113 aaPredicted RBP5.41□□□□□ -1.54
CNTNAP3B-205ENST00000476961 SPAG11BQ08648 103 aa5.41□□□□□ -1.54
CNTNAP3B-205ENST00000476961 HTN1P15515 57 aa5.41□□□□□ -1.54
CNTNAP3B-205ENST00000476961 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.41□□□□□ -1.54
CNTNAP3B-205ENST00000476961 Q6ZQY7 126 aa5.41□□□□□ -1.54
CNTNAP3B-205ENST00000476961 INSP01308 110 aa5.4□□□□□ -1.55
CNTNAP3B-205ENST00000476961 TOMM7Q9P0U1 55 aa5.39□□□□□ -1.55
CNTNAP3B-205ENST00000476961 SPAG11AQ6PDA7 123 aa5.38□□□□□ -1.55
CNTNAP3B-205ENST00000476961 KLK12Q9UKR0 248 aa5.38□□□□□ -1.55
CNTNAP3B-205ENST00000476961 LINC00959A0A1B0GUT2 108 aa5.38□□□□□ -1.55
CNTNAP3B-205ENST00000476961 CSNK1G2-AS1Q8NCQ2 148 aa5.38□□□□□ -1.55
CNTNAP3B-205ENST00000476961 KRTAP10-11P60412 298 aa5.37□□□□□ -1.55
CNTNAP3B-205ENST00000476961 DNAH3Q8TD57 4116 aa5.37□□□□□ -1.55
CNTNAP3B-205ENST00000476961 IGHV4-30-4P0DP06 118 aa5.36□□□□□ -1.55
CNTNAP3B-205ENST00000476961 EGFEM1PQ0D2K5 195 aa5.36□□□□□ -1.55
CNTNAP3B-205ENST00000476961 Q6ZSN1 163 aa5.35□□□□□ -1.55
CNTNAP3B-205ENST00000476961 NBEAL2Q6ZNJ1 2754 aa5.35□□□□□ -1.55
CNTNAP3B-205ENST00000476961 TRGV4A0A0C4DH28 118 aa5.35□□□□□ -1.55
CNTNAP3B-205ENST00000476961 C9orf163Q8N9P6 203 aa5.34□□□□□ -1.55
CNTNAP3B-205ENST00000476961 NOTCH1P46531 2555 aa5.34□□□□□ -1.55
CNTNAP3B-205ENST00000476961 NBEAL1Q6ZS30 2694 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms