RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 Q8NBF4 154 aa12.28□□□□□ -0.44
LIMK1-204ENST00000476792 IGLV7-46A0A075B6I9 117 aa12.27□□□□□ -0.45
LIMK1-204ENST00000476792 Q6ZRX8 168 aa12.27□□□□□ -0.45
LIMK1-204ENST00000476792 Q9BRP9 147 aa12.27□□□□□ -0.45
LIMK1-204ENST00000476792 TRAV23DV6A0A075B6W5 121 aa12.26□□□□□ -0.45
LIMK1-204ENST00000476792 C3orf79P0CE67 100 aa12.26□□□□□ -0.45
LIMK1-204ENST00000476792 KRTDAPP60985 99 aa12.25□□□□□ -0.45
LIMK1-204ENST00000476792 CTAG1AP78358 180 aa12.25□□□□□ -0.45
LIMK1-204ENST00000476792 LINC00483Q53H64 154 aa12.25□□□□□ -0.45
LIMK1-204ENST00000476792 TTTY13Q9BZ97 58 aa12.25□□□□□ -0.45
LIMK1-204ENST00000476792 IGLV9-49A0A0B4J1Y8 123 aa12.24□□□□□ -0.45
LIMK1-204ENST00000476792 ZNF815PA8K554 130 aa12.24□□□□□ -0.45
LIMK1-204ENST00000476792 LITAFQ99732 161 aa12.24□□□□□ -0.45
LIMK1-204ENST00000476792 LINC00308Q8TCZ7 52 aa12.23□□□□□ -0.45
LIMK1-204ENST00000476792 ZNF73O43830 326 aaPredicted RBP12.22□□□□□ -0.45
LIMK1-204ENST00000476792 MOBPQ13875 183 aa12.22□□□□□ -0.45
LIMK1-204ENST00000476792 OR13C6PQ8NH95 151 aa12.22□□□□□ -0.45
LIMK1-204ENST00000476792 CDIP1Q9H305 208 aa12.22□□□□□ -0.45
LIMK1-204ENST00000476792 TIMM17BO60830 172 aa12.2□□□□□ -0.46
LIMK1-204ENST00000476792 JOSD1Q15040 202 aaPredicted RBP12.2□□□□□ -0.46
LIMK1-204ENST00000476792 COA6Q5JTJ3 125 aaKnown RBP12.2□□□□□ -0.46
LIMK1-204ENST00000476792 SPANXCQ9NY87 97 aa12.2□□□□□ -0.46
LIMK1-204ENST00000476792 TMA7Q9Y2S6 64 aaKnown RBP12.19□□□□□ -0.46
LIMK1-204ENST00000476792 TPRXLQ17RH7 258 aa12.18□□□□□ -0.46
LIMK1-204ENST00000476792 HINT1P49773 126 aaPredicted RBP12.17□□□□□ -0.46
LIMK1-204ENST00000476792 ST20-AS1Q8NBB2 130 aa12.16□□□□□ -0.46
LIMK1-204ENST00000476792 CBY1Q9Y3M2 126 aa12.16□□□□□ -0.46
LIMK1-204ENST00000476792 C20orf202A1L168 122 aa12.15□□□□□ -0.46
LIMK1-204ENST00000476792 SPINK1P00995 79 aa12.15□□□□□ -0.46
LIMK1-204ENST00000476792 ATOH7Q8N100 152 aa12.15□□□□□ -0.46
LIMK1-204ENST00000476792 SCGB1D4Q6XE38 83 aa12.14□□□□□ -0.47
LIMK1-204ENST00000476792 SSBP3-AS1Q7Z2R9 100 aa12.14□□□□□ -0.47
LIMK1-204ENST00000476792 ANKRD39Q53RE8 183 aa12.13□□□□□ -0.47
LIMK1-204ENST00000476792 C9orf153Q5TBE3 101 aa12.13□□□□□ -0.47
LIMK1-204ENST00000476792 SPANXDQ9BXN6 97 aa12.12□□□□□ -0.47
LIMK1-204ENST00000476792 FP248Q71RG6 208 aaPredicted RBP12.11□□□□□ -0.47
LIMK1-204ENST00000476792 S100A6P06703 90 aa12.1□□□□□ -0.47
LIMK1-204ENST00000476792 LINC00518Q8N0U6 118 aa12.09□□□□□ -0.47
LIMK1-204ENST00000476792 A0A0U1RQV1 116 aa12.06□□□□□ -0.48
LIMK1-204ENST00000476792 C6orf99Q4VX62 202 aa12.06□□□□□ -0.48
LIMK1-204ENST00000476792 PCP2Q8IVA1 136 aa12.06□□□□□ -0.48
LIMK1-204ENST00000476792 DHRS4-AS1Q9P1J3 65 aa12.06□□□□□ -0.48
LIMK1-204ENST00000476792 MUC2Q02817 5179 aa12.06□□□□□ -0.48
LIMK1-204ENST00000476792 COX7BP24311 80 aa12.05□□□□□ -0.48
LIMK1-204ENST00000476792 C5orf52A6NGY3 159 aa12.04□□□□□ -0.48
LIMK1-204ENST00000476792 SNRPEP62304 92 aaKnown RBP12.04□□□□□ -0.48
LIMK1-204ENST00000476792 Q8N377 158 aa12.04□□□□□ -0.48
LIMK1-204ENST00000476792 ELOF1P60002 83 aaKnown RBP12.02□□□□□ -0.49
LIMK1-204ENST00000476792 KRTAP13-3Q3SY46 172 aa12.02□□□□□ -0.49
LIMK1-204ENST00000476792 A6NDN8 102 aa12.01□□□□□ -0.49
LIMK1-204ENST00000476792 SLC25A20O43772 301 aa12.01□□□□□ -0.49
LIMK1-204ENST00000476792 IFITM1P13164 125 aa12.01□□□□□ -0.49
LIMK1-204ENST00000476792 RPS29P62273 56 aaKnown RBP12.01□□□□□ -0.49
LIMK1-204ENST00000476792 MUSTN1Q8IVN3 82 aa12.01□□□□□ -0.49
LIMK1-204ENST00000476792 HIST3H2BBQ8N257 126 aa12.01□□□□□ -0.49
LIMK1-204ENST00000476792 COPS9Q8WXC6 57 aa12.01□□□□□ -0.49
LIMK1-204ENST00000476792 DEFB105AQ8NG35 78 aa12□□□□□ -0.49
LIMK1-204ENST00000476792 SPRR1BP22528 89 aa11.99□□□□□ -0.49
LIMK1-204ENST00000476792 AKR1D1P51857 326 aa11.99□□□□□ -0.49
LIMK1-204ENST00000476792 S100A2P29034 98 aa11.98□□□□□ -0.49
LIMK1-204ENST00000476792 TAL2Q16559 108 aa11.98□□□□□ -0.49
LIMK1-204ENST00000476792 SLC25A34Q6PIV7 304 aa11.98□□□□□ -0.49
LIMK1-204ENST00000476792 HRCT1Q6UXD1 115 aa11.98□□□□□ -0.49
LIMK1-204ENST00000476792 LAMTOR3Q9UHA4 124 aa11.98□□□□□ -0.49
LIMK1-204ENST00000476792 Q6ZVH6 145 aa11.97□□□□□ -0.49
LIMK1-204ENST00000476792 HIST1H2BLQ99880 126 aa11.96□□□□□ -0.49
LIMK1-204ENST00000476792 Q1RN00 199 aa11.95□□□□□ -0.5
LIMK1-204ENST00000476792 TRBV7-6A0A0J9YX20 115 aa11.92□□□□□ -0.5
LIMK1-204ENST00000476792 A0A1B0GWB2 263 aa11.92□□□□□ -0.5
LIMK1-204ENST00000476792 MUC17Q685J3 4493 aa11.92□□□□□ -0.5
LIMK1-204ENST00000476792 TEX49A0A1B0GTD5 131 aa11.9□□□□□ -0.5
LIMK1-204ENST00000476792 HSBP1L1C9JCN9 74 aa11.9□□□□□ -0.5
LIMK1-204ENST00000476792 TRAV13-2A0A0B4J235 113 aa11.89□□□□□ -0.51
LIMK1-204ENST00000476792 LOC105371267A0A1B0GV96 52 aa11.88□□□□□ -0.51
LIMK1-204ENST00000476792 SMIM11BQ8TCY0 68 aa11.88□□□□□ -0.51
LIMK1-204ENST00000476792 LIMD2Q9BT23 127 aa11.87□□□□□ -0.51
LIMK1-204ENST00000476792 ASB16-AS1Q495Z4 193 aa11.86□□□□□ -0.51
LIMK1-204ENST00000476792 PRO1933Q9H354 126 aa11.85□□□□□ -0.51
LIMK1-204ENST00000476792 SEC61BP60468 96 aaKnown RBP11.84□□□□□ -0.51
LIMK1-204ENST00000476792 SMIM29Q86T20 159 aa11.84□□□□□ -0.51
LIMK1-204ENST00000476792 A4D1N5 150 aa11.83□□□□□ -0.52
LIMK1-204ENST00000476792 H7C2G1 150 aa11.83□□□□□ -0.52
LIMK1-204ENST00000476792 LINC01547P58512 204 aaPredicted RBP11.83□□□□□ -0.52
LIMK1-204ENST00000476792 IGLV5-48A0A075B6I7 105 aa11.82□□□□□ -0.52
LIMK1-204ENST00000476792 A0A0G2JQZ4 141 aa11.82□□□□□ -0.52
LIMK1-204ENST00000476792 SCGB1D1O95968 90 aa11.81□□□□□ -0.52
LIMK1-204ENST00000476792 NHP2Q9NX24 153 aaKnown RBP11.81□□□□□ -0.52
LIMK1-204ENST00000476792 FAT4Q6V0I7 4981 aa11.8□□□□□ -0.52
LIMK1-204ENST00000476792 LCE2AQ5TA79 106 aaPredicted RBP11.8□□□□□ -0.52
LIMK1-204ENST00000476792 VAMP3Q15836 100 aa11.79□□□□□ -0.52
LIMK1-204ENST00000476792 XP32Q5T750 250 aa11.79□□□□□ -0.52
LIMK1-204ENST00000476792 CD164Q04900 197 aa11.78□□□□□ -0.52
LIMK1-204ENST00000476792 KRTAP4-1Q9BYQ7 146 aa11.78□□□□□ -0.52
LIMK1-204ENST00000476792 C9orf92A6NGG3 77 aa11.75□□□□□ -0.53
LIMK1-204ENST00000476792 C12orf57Q99622 126 aa11.75□□□□□ -0.53
LIMK1-204ENST00000476792 LINC00575Q6W349 94 aa11.73□□□□□ -0.53
LIMK1-204ENST00000476792 HIST1H4GQ99525 98 aa11.73□□□□□ -0.53
LIMK1-204ENST00000476792 PYY3Q5JQD4 70 aa11.71□□□□□ -0.53
LIMK1-204ENST00000476792 COX8AP10176 69 aa11.7□□□□□ -0.54
LIMK1-204ENST00000476792 hADV29S1A0JD25 119 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms