RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 TRAV23DV6A0A075B6W5 121 aa12.25□□□□□ -0.45
LIME1-204ENST00000476183 ANKRD39Q53RE8 183 aa12.25□□□□□ -0.45
LIME1-204ENST00000476183 PPDPFQ9H3Y8 114 aa12.25□□□□□ -0.45
LIME1-204ENST00000476183 C20orf202A1L168 122 aa12.24□□□□□ -0.45
LIME1-204ENST00000476183 Q6ZRX8 168 aa12.24□□□□□ -0.45
LIME1-204ENST00000476183 ATOH7Q8N100 152 aa12.24□□□□□ -0.45
LIME1-204ENST00000476183 S100A1P23297 94 aa12.23□□□□□ -0.45
LIME1-204ENST00000476183 SPANXCQ9NY87 97 aa12.23□□□□□ -0.45
LIME1-204ENST00000476183 LINC00483Q53H64 154 aa12.22□□□□□ -0.45
LIME1-204ENST00000476183 ZNF73O43830 326 aaPredicted RBP12.21□□□□□ -0.45
LIME1-204ENST00000476183 RETNLBQ9BQ08 111 aa12.21□□□□□ -0.45
LIME1-204ENST00000476183 GAGE2AQ6NT46 116 aa12.2□□□□□ -0.46
LIME1-204ENST00000476183 HIST3H2BBQ8N257 126 aa12.19□□□□□ -0.46
LIME1-204ENST00000476183 PCP2Q8IVA1 136 aa12.17□□□□□ -0.46
LIME1-204ENST00000476183 CTAG1AP78358 180 aa12.16□□□□□ -0.46
LIME1-204ENST00000476183 SCGB1D4Q6XE38 83 aa12.16□□□□□ -0.46
LIME1-204ENST00000476183 OR13C6PQ8NH95 151 aa12.16□□□□□ -0.46
LIME1-204ENST00000476183 HIST1H2BLQ99880 126 aa12.16□□□□□ -0.46
LIME1-204ENST00000476183 SPANXDQ9BXN6 97 aa12.16□□□□□ -0.46
LIME1-204ENST00000476183 Q8NBF4 154 aa12.15□□□□□ -0.46
LIME1-204ENST00000476183 JOSD1Q15040 202 aaPredicted RBP12.14□□□□□ -0.47
LIME1-204ENST00000476183 SPAG11AQ6PDA7 123 aa12.13□□□□□ -0.47
LIME1-204ENST00000476183 S100A2P29034 98 aa12.12□□□□□ -0.47
LIME1-204ENST00000476183 AKR1D1P51857 326 aa12.12□□□□□ -0.47
LIME1-204ENST00000476183 CBY1Q9Y3M2 126 aa12.12□□□□□ -0.47
LIME1-204ENST00000476183 LINC00518Q8N0U6 118 aa12.11□□□□□ -0.47
LIME1-204ENST00000476183 ST20-AS1Q8NBB2 130 aa12.11□□□□□ -0.47
LIME1-204ENST00000476183 IGLV9-49A0A0B4J1Y8 123 aa12.1□□□□□ -0.47
LIME1-204ENST00000476183 MOBPQ13875 183 aa12.1□□□□□ -0.47
LIME1-204ENST00000476183 HINT1P49773 126 aaPredicted RBP12.09□□□□□ -0.47
LIME1-204ENST00000476183 C4orf48Q5BLP8 95 aa12.09□□□□□ -0.47
LIME1-204ENST00000476183 IFITM1P13164 125 aa12.08□□□□□ -0.48
LIME1-204ENST00000476183 SNRPEP62304 92 aaKnown RBP12.08□□□□□ -0.48
LIME1-204ENST00000476183 MUSTN1Q8IVN3 82 aa12.07□□□□□ -0.48
LIME1-204ENST00000476183 MUC2Q02817 5179 aa12.06□□□□□ -0.48
LIME1-204ENST00000476183 S100A6P06703 90 aa12.06□□□□□ -0.48
LIME1-204ENST00000476183 Q6ZVH6 145 aa12.06□□□□□ -0.48
LIME1-204ENST00000476183 IGLV7-46A0A075B6I9 117 aa12.05□□□□□ -0.48
LIME1-204ENST00000476183 C6orf99Q4VX62 202 aa12.05□□□□□ -0.48
LIME1-204ENST00000476183 SSBP3-AS1Q7Z2R9 100 aa12.05□□□□□ -0.48
LIME1-204ENST00000476183 COPS9Q8WXC6 57 aa12.05□□□□□ -0.48
LIME1-204ENST00000476183 ELOF1P60002 83 aaKnown RBP12.04□□□□□ -0.48
LIME1-204ENST00000476183 C5orf52A6NGY3 159 aa12.03□□□□□ -0.48
LIME1-204ENST00000476183 COX7BP24311 80 aa12.03□□□□□ -0.48
LIME1-204ENST00000476183 DHRS4-AS1Q9P1J3 65 aa12.03□□□□□ -0.48
LIME1-204ENST00000476183 SPINK1P00995 79 aa12.02□□□□□ -0.49
LIME1-204ENST00000476183 TPRXLQ17RH7 258 aa12.01□□□□□ -0.49
LIME1-204ENST00000476183 MUC17Q685J3 4493 aa12□□□□□ -0.49
LIME1-204ENST00000476183 A6NDN8 102 aa11.99□□□□□ -0.49
LIME1-204ENST00000476183 HSBP1L1C9JCN9 74 aa11.99□□□□□ -0.49
LIME1-204ENST00000476183 SPRR1BP22528 89 aa11.99□□□□□ -0.49
LIME1-204ENST00000476183 C9orf153Q5TBE3 101 aa11.99□□□□□ -0.49
LIME1-204ENST00000476183 TRBV7-6A0A0J9YX20 115 aa11.97□□□□□ -0.49
LIME1-204ENST00000476183 FP248Q71RG6 208 aaPredicted RBP11.97□□□□□ -0.49
LIME1-204ENST00000476183 RPS29P62273 56 aaKnown RBP11.95□□□□□ -0.5
LIME1-204ENST00000476183 CDIP1Q9H305 208 aa11.95□□□□□ -0.5
LIME1-204ENST00000476183 SCGB1D1O95968 90 aa11.94□□□□□ -0.5
LIME1-204ENST00000476183 Q8N377 158 aa11.94□□□□□ -0.5
LIME1-204ENST00000476183 TRAV13-2A0A0B4J235 113 aa11.93□□□□□ -0.5
LIME1-204ENST00000476183 A0A1B0GWB2 263 aa11.93□□□□□ -0.5
LIME1-204ENST00000476183 SMIM11BQ8TCY0 68 aa11.92□□□□□ -0.5
LIME1-204ENST00000476183 SLC25A34Q6PIV7 304 aa11.9□□□□□ -0.5
LIME1-204ENST00000476183 DEFB105AQ8NG35 78 aa11.9□□□□□ -0.5
LIME1-204ENST00000476183 A4D1N5 150 aa11.89□□□□□ -0.51
LIME1-204ENST00000476183 TAL2Q16559 108 aa11.89□□□□□ -0.51
LIME1-204ENST00000476183 LAMTOR3Q9UHA4 124 aa11.89□□□□□ -0.51
LIME1-204ENST00000476183 LINC01547P58512 204 aaPredicted RBP11.88□□□□□ -0.51
LIME1-204ENST00000476183 KRTAP13-3Q3SY46 172 aa11.88□□□□□ -0.51
LIME1-204ENST00000476183 TEX49A0A1B0GTD5 131 aa11.87□□□□□ -0.51
LIME1-204ENST00000476183 SLC25A20O43772 301 aa11.87□□□□□ -0.51
LIME1-204ENST00000476183 Q1RN00 199 aa11.87□□□□□ -0.51
LIME1-204ENST00000476183 COX8AP10176 69 aa11.85□□□□□ -0.51
LIME1-204ENST00000476183 SMIM29Q86T20 159 aa11.85□□□□□ -0.51
LIME1-204ENST00000476183 IGLV5-48A0A075B6I7 105 aa11.84□□□□□ -0.51
LIME1-204ENST00000476183 HRCT1Q6UXD1 115 aa11.83□□□□□ -0.52
LIME1-204ENST00000476183 HIST1H4GQ99525 98 aa11.81□□□□□ -0.52
LIME1-204ENST00000476183 DLEU1O43261 78 aa11.8□□□□□ -0.52
LIME1-204ENST00000476183 C12orf57Q99622 126 aa11.8□□□□□ -0.52
LIME1-204ENST00000476183 C14orf144Q96I85 54 aa11.79□□□□□ -0.52
LIME1-204ENST00000476183 NHP2Q9NX24 153 aaKnown RBP11.79□□□□□ -0.52
LIME1-204ENST00000476183 PAM16Q9Y3D7 125 aa11.78□□□□□ -0.52
LIME1-204ENST00000476183 LINC00575Q6W349 94 aa11.77□□□□□ -0.53
LIME1-204ENST00000476183 PRO1933Q9H354 126 aa11.77□□□□□ -0.53
LIME1-204ENST00000476183 VAMP3Q15836 100 aa11.76□□□□□ -0.53
LIME1-204ENST00000476183 SPATA45Q537H7 98 aa11.76□□□□□ -0.53
LIME1-204ENST00000476183 FAT4Q6V0I7 4981 aa11.75□□□□□ -0.53
LIME1-204ENST00000476183 A0A0G2JQZ4 141 aa11.75□□□□□ -0.53
LIME1-204ENST00000476183 LIMD2Q9BT23 127 aa11.75□□□□□ -0.53
LIME1-204ENST00000476183 CD164Q04900 197 aa11.74□□□□□ -0.53
LIME1-204ENST00000476183 VAMP8Q9BV40 100 aa11.72□□□□□ -0.53
LIME1-204ENST00000476183 hADV29S1A0JD25 119 aa11.71□□□□□ -0.53
LIME1-204ENST00000476183 C2orf91Q6ZV80 131 aa11.71□□□□□ -0.53
LIME1-204ENST00000476183 HIGD1BQ9P298 99 aa11.71□□□□□ -0.53
LIME1-204ENST00000476183 H7C2G1 150 aa11.7□□□□□ -0.54
LIME1-204ENST00000476183 Q6ZQY7 126 aa11.7□□□□□ -0.54
LIME1-204ENST00000476183 A0A0U1RQV1 116 aa11.69□□□□□ -0.54
LIME1-204ENST00000476183 CFC1BP0CG36 223 aa11.69□□□□□ -0.54
LIME1-204ENST00000476183 CFC1P0CG37 223 aa11.69□□□□□ -0.54
LIME1-204ENST00000476183 ASB16-AS1Q495Z4 193 aa11.69□□□□□ -0.54
LIME1-204ENST00000476183 XP32Q5T750 250 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms