RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 DDTP30046 118 aa10.18□□□□□ -0.78
SCAF11-206ENST00000474828 NPC2P61916 151 aa10.18□□□□□ -0.78
SCAF11-206ENST00000474828 COPS9Q8WXC6 57 aa10.18□□□□□ -0.78
SCAF11-206ENST00000474828 TMA7Q9Y2S6 64 aaKnown RBP10.17□□□□□ -0.78
SCAF11-206ENST00000474828 PYY3Q5JQD4 70 aa10.16□□□□□ -0.78
SCAF11-206ENST00000474828 LINC00518Q8N0U6 118 aa10.16□□□□□ -0.78
SCAF11-206ENST00000474828 UBE2AP49459 152 aa10.14□□□□□ -0.79
SCAF11-206ENST00000474828 FAM19A1Q7Z5A9 133 aa10.14□□□□□ -0.79
SCAF11-206ENST00000474828 A6NJY4 79 aa10.13□□□□□ -0.79
SCAF11-206ENST00000474828 PRLHP81277 87 aa10.13□□□□□ -0.79
SCAF11-206ENST00000474828 MUSTN1Q8IVN3 82 aa10.13□□□□□ -0.79
SCAF11-206ENST00000474828 VAMP8Q9BV40 100 aa10.13□□□□□ -0.79
SCAF11-206ENST00000474828 S100A12P80511 92 aa10.12□□□□□ -0.79
SCAF11-206ENST00000474828 SPATA45Q537H7 98 aa10.12□□□□□ -0.79
SCAF11-206ENST00000474828 S100A7L2Q5SY68 101 aa10.12□□□□□ -0.79
SCAF11-206ENST00000474828 CBY1Q9Y3M2 126 aa10.12□□□□□ -0.79
SCAF11-206ENST00000474828 B5MCH6 92 aa10.11□□□□□ -0.79
SCAF11-206ENST00000474828 PAM16Q9Y3D7 125 aa10.11□□□□□ -0.79
SCAF11-206ENST00000474828 TRAV23DV6A0A075B6W5 121 aa10.1□□□□□ -0.79
SCAF11-206ENST00000474828 HIGD1BQ9P298 99 aa10.1□□□□□ -0.79
SCAF11-206ENST00000474828 ETDCA0A1B0GVM5 59 aa10.08□□□□□ -0.8
SCAF11-206ENST00000474828 ZNF73O43830 326 aaPredicted RBP10.08□□□□□ -0.8
SCAF11-206ENST00000474828 Q6ZRX8 168 aa10.08□□□□□ -0.8
SCAF11-206ENST00000474828 C14orf144Q96I85 54 aa10.08□□□□□ -0.8
SCAF11-206ENST00000474828 SMCR5Q8TEV8 140 aa10.07□□□□□ -0.8
SCAF11-206ENST00000474828 FAM229BQ4G0N7 80 aa10.06□□□□□ -0.8
SCAF11-206ENST00000474828 SLC25A34Q6PIV7 304 aa10.06□□□□□ -0.8
SCAF11-206ENST00000474828 C2orf91Q6ZV80 131 aa10.06□□□□□ -0.8
SCAF11-206ENST00000474828 PRR26Q8N8Z3 221 aa10.06□□□□□ -0.8
SCAF11-206ENST00000474828 Q9BRP9 147 aa10.05□□□□□ -0.8
SCAF11-206ENST00000474828 RPL13AP40429 203 aaKnown RBP10.04□□□□□ -0.8
SCAF11-206ENST00000474828 OR13C6PQ8NH95 151 aa10.04□□□□□ -0.8
SCAF11-206ENST00000474828 HIGD2AQ9BW72 106 aa10.04□□□□□ -0.8
SCAF11-206ENST00000474828 A0A087X002 238 aa10.03□□□□□ -0.8
SCAF11-206ENST00000474828 TRAV13-2A0A0B4J235 113 aa10.03□□□□□ -0.8
SCAF11-206ENST00000474828 TRBV7-6A0A0J9YX20 115 aa10.03□□□□□ -0.8
SCAF11-206ENST00000474828 A4D1N5 150 aa10.03□□□□□ -0.8
SCAF11-206ENST00000474828 SPRR4Q96PI1 79 aa10.03□□□□□ -0.8
SCAF11-206ENST00000474828 HMCN2Q8NDA2 5059 aa10.01□□□□□ -0.81
SCAF11-206ENST00000474828 HIST1H4GQ99525 98 aa10.01□□□□□ -0.81
SCAF11-206ENST00000474828 ERC2-IT1O76042 136 aa10□□□□□ -0.81
SCAF11-206ENST00000474828 CRYGAP11844 174 aa10□□□□□ -0.81
SCAF11-206ENST00000474828 ELOF1P60002 83 aaKnown RBP10□□□□□ -0.81
SCAF11-206ENST00000474828 TAL2Q16559 108 aa10□□□□□ -0.81
SCAF11-206ENST00000474828 LINC00483Q53H64 154 aa10□□□□□ -0.81
SCAF11-206ENST00000474828 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
SCAF11-206ENST00000474828 C6orf99Q4VX62 202 aa9.99□□□□□ -0.81
SCAF11-206ENST00000474828 KRTAP13-2Q52LG2 175 aa9.99□□□□□ -0.81
SCAF11-206ENST00000474828 A6NDN8 102 aa9.98□□□□□ -0.81
SCAF11-206ENST00000474828 HINT1P49773 126 aaPredicted RBP9.98□□□□□ -0.81
SCAF11-206ENST00000474828 ANAPC11Q9NYG5 84 aa9.98□□□□□ -0.81
SCAF11-206ENST00000474828 SMIM11BQ8TCY0 68 aa9.96□□□□□ -0.82
SCAF11-206ENST00000474828 DHRS4-AS1Q9P1J3 65 aa9.95□□□□□ -0.82
SCAF11-206ENST00000474828 A0A1B0GWB2 263 aa9.94□□□□□ -0.82
SCAF11-206ENST00000474828 COX7BP24311 80 aa9.94□□□□□ -0.82
SCAF11-206ENST00000474828 CFC1BP0CG36 223 aa9.93□□□□□ -0.82
SCAF11-206ENST00000474828 CFC1P0CG37 223 aa9.93□□□□□ -0.82
SCAF11-206ENST00000474828 CEND1Q8N111 149 aa9.93□□□□□ -0.82
SCAF11-206ENST00000474828 A0A0B4J2C4 111 aa9.92□□□□□ -0.82
SCAF11-206ENST00000474828 SMIM6P0DI80 62 aa9.92□□□□□ -0.82
SCAF11-206ENST00000474828 SPRR1BP22528 89 aa9.92□□□□□ -0.82
SCAF11-206ENST00000474828 UQCR10Q9UDW1 63 aa9.92□□□□□ -0.82
SCAF11-206ENST00000474828 CTAG1AP78358 180 aa9.91□□□□□ -0.82
SCAF11-206ENST00000474828 TYMSOSQ8TAI1 123 aa9.91□□□□□ -0.82
SCAF11-206ENST00000474828 LOC105371267A0A1B0GV96 52 aa9.89□□□□□ -0.83
SCAF11-206ENST00000474828 HSD52Q0P140 79 aa9.88□□□□□ -0.83
SCAF11-206ENST00000474828 C12orf57Q99622 126 aa9.88□□□□□ -0.83
SCAF11-206ENST00000474828 FXYD2P54710 66 aa9.87□□□□□ -0.83
SCAF11-206ENST00000474828 GAGE2AQ6NT46 116 aa9.87□□□□□ -0.83
SCAF11-206ENST00000474828 C3orf22Q8N5N4 141 aa9.87□□□□□ -0.83
SCAF11-206ENST00000474828 ST20-AS1Q8NBB2 130 aa9.87□□□□□ -0.83
SCAF11-206ENST00000474828 TMEM238LA0A1B0GVL6 79 aa9.86□□□□□ -0.83
SCAF11-206ENST00000474828 IGLV5-48A0A075B6I7 105 aa9.85□□□□□ -0.83
SCAF11-206ENST00000474828 UBR4Q5T4S7 5183 aa9.84□□□□□ -0.83
SCAF11-206ENST00000474828 LINC01547P58512 204 aaPredicted RBP9.84□□□□□ -0.83
SCAF11-206ENST00000474828 VAMP3Q15836 100 aa9.84□□□□□ -0.83
SCAF11-206ENST00000474828 LINC00575Q6W349 94 aa9.84□□□□□ -0.83
SCAF11-206ENST00000474828 NHP2Q9NX24 153 aaKnown RBP9.83□□□□□ -0.84
SCAF11-206ENST00000474828 BVES-AS1Q5T3Y7 98 aa9.82□□□□□ -0.84
SCAF11-206ENST00000474828 SSBP3-AS1Q7Z2R9 100 aa9.82□□□□□ -0.84
SCAF11-206ENST00000474828 LINC00304Q8N9R0 145 aa9.82□□□□□ -0.84
SCAF11-206ENST00000474828 RAB37Q96AX2 223 aa9.82□□□□□ -0.84
SCAF11-206ENST00000474828 PRO1854Q9UHT4 67 aa9.82□□□□□ -0.84
SCAF11-206ENST00000474828 SPAG11AQ6PDA7 123 aa9.8□□□□□ -0.84
SCAF11-206ENST00000474828 TEX49A0A1B0GTD5 131 aa9.79□□□□□ -0.84
SCAF11-206ENST00000474828 SMIM29Q86T20 159 aa9.78□□□□□ -0.84
SCAF11-206ENST00000474828 PRO1933Q9H354 126 aa9.77□□□□□ -0.85
SCAF11-206ENST00000474828 hADV29S1A0JD25 119 aa9.76□□□□□ -0.85
SCAF11-206ENST00000474828 H0YGX0 51 aa9.76□□□□□ -0.85
SCAF11-206ENST00000474828 SLC25A20O43772 301 aa9.76□□□□□ -0.85
SCAF11-206ENST00000474828 Q8N377 158 aa9.76□□□□□ -0.85
SCAF11-206ENST00000474828 Q8NBF4 154 aa9.76□□□□□ -0.85
SCAF11-206ENST00000474828 MOBPQ13875 183 aa9.75□□□□□ -0.85
SCAF11-206ENST00000474828 IGLV9-49A0A0B4J1Y8 123 aa9.74□□□□□ -0.85
SCAF11-206ENST00000474828 H7C2G1 150 aa9.74□□□□□ -0.85
SCAF11-206ENST00000474828 RPS29P62273 56 aaKnown RBP9.74□□□□□ -0.85
SCAF11-206ENST00000474828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.74□□□□□ -0.85
SCAF11-206ENST00000474828 LAMTOR3Q9UHA4 124 aa9.74□□□□□ -0.85
SCAF11-206ENST00000474828 SPINK1P00995 79 aa9.73□□□□□ -0.85
SCAF11-206ENST00000474828 LRP2P98164 4655 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms