RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 SERTAD4-AS1Q5TG53 156 aa4.21□□□□□ -1.74
ATG4A-207ENST00000474825 LYRM7Q5U5X0 104 aa4.21□□□□□ -1.74
ATG4A-207ENST00000474825 SMIM11BQ8TCY0 68 aa4.21□□□□□ -1.74
ATG4A-207ENST00000474825 NAA38Q9BRA0 125 aaKnown RBP4.21□□□□□ -1.74
ATG4A-207ENST00000474825 LINC00474Q9P2X8 69 aa4.21□□□□□ -1.74
ATG4A-207ENST00000474825 GAGE2DQ9UEU5 116 aa4.21□□□□□ -1.74
ATG4A-207ENST00000474825 A0A096LNI7 61 aa4.2□□□□□ -1.74
ATG4A-207ENST00000474825 RPL18AQ02543 176 aaKnown RBP4.2□□□□□ -1.74
ATG4A-207ENST00000474825 UBE2V1Q13404 147 aa4.2□□□□□ -1.74
ATG4A-207ENST00000474825 VAMP3Q15836 100 aa4.2□□□□□ -1.74
ATG4A-207ENST00000474825 LINC01600Q96MT4 127 aa4.2□□□□□ -1.74
ATG4A-207ENST00000474825 TRBV7-6A0A0J9YX20 115 aa4.19□□□□□ -1.74
ATG4A-207ENST00000474825 A0A1W2PNN7 141 aa4.19□□□□□ -1.74
ATG4A-207ENST00000474825 GAGE10A6NGK3 116 aa4.19□□□□□ -1.74
ATG4A-207ENST00000474825 H0YGX0 51 aa4.19□□□□□ -1.74
ATG4A-207ENST00000474825 NCR3O14931 201 aa4.19□□□□□ -1.74
ATG4A-207ENST00000474825 COX6CP09669 75 aa4.19□□□□□ -1.74
ATG4A-207ENST00000474825 GAGE2BQ13066 116 aa4.19□□□□□ -1.74
ATG4A-207ENST00000474825 LINC00336Q6ZUF6 198 aa4.19□□□□□ -1.74
ATG4A-207ENST00000474825 KCNQ1DNQ9H478 68 aa4.19□□□□□ -1.74
ATG4A-207ENST00000474825 SPCS1Q9Y6A9 102 aa4.19□□□□□ -1.74
ATG4A-207ENST00000474825 IGLV1-50A0A075B6I6 118 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 TRBV10-3A0A0K0K1G6 114 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 A0A1B0GX51 115 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 FAM168BA1KXE4 195 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 H7C2G1 150 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 LST1O00453 97 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 TCL1BO95988 128 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 SPRR1AP35321 89 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 PSMB2P49721 201 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 Q1RN00 199 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 GTF2H5Q6ZYL4 71 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 OR13C6PQ8NH95 151 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 SPACA4Q8TDM5 124 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 C7orf33Q8WU49 177 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 C22orf24Q9Y442 160 aa4.18□□□□□ -1.74
ATG4A-207ENST00000474825 TRAV23DV6A0A075B6W5 121 aa4.17□□□□□ -1.74
ATG4A-207ENST00000474825 KRTAP4-16G5E9R7 235 aaPredicted RBP4.17□□□□□ -1.74
ATG4A-207ENST00000474825 PANO1I0J062 215 aa4.17□□□□□ -1.74
ATG4A-207ENST00000474825 S100A7L2Q5SY68 101 aa4.17□□□□□ -1.74
ATG4A-207ENST00000474825 MRPL55Q7Z7F7 128 aaKnown RBP4.17□□□□□ -1.74
ATG4A-207ENST00000474825 LINC00167Q96N53 147 aa4.17□□□□□ -1.74
ATG4A-207ENST00000474825 PRO0461Q9UI25 63 aa4.17□□□□□ -1.74
ATG4A-207ENST00000474825 IGLV5-52A0A0A0MRZ9 124 aa4.16□□□□□ -1.74
ATG4A-207ENST00000474825 H3BMG7 143 aa4.16□□□□□ -1.74
ATG4A-207ENST00000474825 M0QXV9 152 aa4.16□□□□□ -1.74
ATG4A-207ENST00000474825 TRACP01848 142 aa4.16□□□□□ -1.74
ATG4A-207ENST00000474825 CHTF8P0CG12 524 aa4.16□□□□□ -1.74
ATG4A-207ENST00000474825 SCGB1C2P0DMR2 95 aa4.16□□□□□ -1.74
ATG4A-207ENST00000474825 ATXN8Q156A1 80 aa4.16□□□□□ -1.74
ATG4A-207ENST00000474825 C6orf99Q4VX62 202 aa4.16□□□□□ -1.74
ATG4A-207ENST00000474825 Q6ZSA8 131 aa4.16□□□□□ -1.74
ATG4A-207ENST00000474825 NKAPP1Q8N9T2 125 aa4.16□□□□□ -1.74
ATG4A-207ENST00000474825 PLAC8Q9NZF1 115 aa4.16□□□□□ -1.74
ATG4A-207ENST00000474825 IGKV2-24A0A0C4DH68 120 aa4.15□□□□□ -1.75
ATG4A-207ENST00000474825 A0A1B0GVY2 172 aa4.15□□□□□ -1.75
ATG4A-207ENST00000474825 F8W1H4 67 aa4.15□□□□□ -1.75
ATG4A-207ENST00000474825 PRYO14603 147 aa4.15□□□□□ -1.75
ATG4A-207ENST00000474825 ZNF73O43830 326 aaPredicted RBP4.15□□□□□ -1.75
ATG4A-207ENST00000474825 ELOF1P60002 83 aaKnown RBP4.15□□□□□ -1.75
ATG4A-207ENST00000474825 LINC01620Q4KN68 170 aa4.15□□□□□ -1.75
ATG4A-207ENST00000474825 LINC00575Q6W349 94 aa4.15□□□□□ -1.75
ATG4A-207ENST00000474825 CLEC2BQ92478 149 aa4.15□□□□□ -1.75
ATG4A-207ENST00000474825 FAM218AQ96MZ4 157 aa4.15□□□□□ -1.75
ATG4A-207ENST00000474825 VPS25Q9BRG1 176 aa4.15□□□□□ -1.75
ATG4A-207ENST00000474825 VPS13BQ7Z7G8 4022 aa4.15□□□□□ -1.75
ATG4A-207ENST00000474825 INAFM2P0DMQ5 153 aa4.14□□□□□ -1.75
ATG4A-207ENST00000474825 FAM19A5Q7Z5A7 132 aaPredicted RBP4.14□□□□□ -1.75
ATG4A-207ENST00000474825 DIRC1Q969H9 104 aa4.14□□□□□ -1.75
ATG4A-207ENST00000474825 FAT1Q14517 4588 aa4.13□□□□□ -1.75
ATG4A-207ENST00000474825 A0A087WYN8 130 aa4.13□□□□□ -1.75
ATG4A-207ENST00000474825 FUSP35637 526 aaKnown RBP eCLIP4.13□□□□□ -1.75
ATG4A-207ENST00000474825 B5MCH6 92 aa4.12□□□□□ -1.75
ATG4A-207ENST00000474825 H0Y9J4 135 aa4.12□□□□□ -1.75
ATG4A-207ENST00000474825 H3BT86 120 aa4.12□□□□□ -1.75
ATG4A-207ENST00000474825 COX7BP24311 80 aa4.12□□□□□ -1.75
ATG4A-207ENST00000474825 PHF5AQ7RTV0 110 aaKnown RBP4.12□□□□□ -1.75
ATG4A-207ENST00000474825 KRTAP11-1Q8IUC1 163 aa4.12□□□□□ -1.75
ATG4A-207ENST00000474825 EPPK1P58107 5090 aaKnown RBP4.12□□□□□ -1.75
ATG4A-207ENST00000474825 RYR1P21817 5038 aa4.11□□□□□ -1.75
ATG4A-207ENST00000474825 HSPG2P98160 4391 aa4.11□□□□□ -1.75
ATG4A-207ENST00000474825 hADV29S1A0JD25 119 aa4.11□□□□□ -1.75
ATG4A-207ENST00000474825 RPL37AP8A6NKH3 93 aa4.11□□□□□ -1.75
ATG4A-207ENST00000474825 C9JAW5 83 aa4.11□□□□□ -1.75
ATG4A-207ENST00000474825 K7ERU9 68 aa4.11□□□□□ -1.75
ATG4A-207ENST00000474825 SLC25A20O43772 301 aa4.11□□□□□ -1.75
ATG4A-207ENST00000474825 KRTAP10-1P60331 282 aa4.11□□□□□ -1.75
ATG4A-207ENST00000474825 OCIAD2Q56VL3 154 aa4.11□□□□□ -1.75
ATG4A-207ENST00000474825 REG3GQ6UW15 175 aa4.11□□□□□ -1.75
ATG4A-207ENST00000474825 Q6ZRX8 168 aa4.11□□□□□ -1.75
ATG4A-207ENST00000474825 KRTAP13-1Q8IUC0 172 aa4.11□□□□□ -1.75
ATG4A-207ENST00000474825 FAM30AQ9NZY2 134 aa4.11□□□□□ -1.75
ATG4A-207ENST00000474825 BIRC6Q9NR09 4857 aa4.1□□□□□ -1.75
ATG4A-207ENST00000474825 H3BQ85 93 aa4.1□□□□□ -1.75
ATG4A-207ENST00000474825 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.1□□□□□ -1.75
ATG4A-207ENST00000474825 ANKRD29Q8N6D5 301 aa4.1□□□□□ -1.75
ATG4A-207ENST00000474825 DHRS4-AS1Q9P1J3 65 aa4.1□□□□□ -1.75
ATG4A-207ENST00000474825 SNCGO76070 127 aa4.09□□□□□ -1.75
ATG4A-207ENST00000474825 CIRBP-AS1Q8TBR5 109 aa4.09□□□□□ -1.75
ATG4A-207ENST00000474825 Q9BRP9 147 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms