RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 HIST1H2BOP23527 126 aa10.42□□□□□ -0.74
DNMT3A-210ENST00000474807 HIST1H2BBP33778 126 aa10.42□□□□□ -0.74
DNMT3A-210ENST00000474807 HIST1H2BDP58876 126 aa10.42□□□□□ -0.74
DNMT3A-210ENST00000474807 HIST1H2BCP62807 126 aa10.42□□□□□ -0.74
DNMT3A-210ENST00000474807 HIST2H2BEQ16778 126 aa10.42□□□□□ -0.74
DNMT3A-210ENST00000474807 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.42□□□□□ -0.74
DNMT3A-210ENST00000474807 HIST1H2BHQ93079 126 aa10.42□□□□□ -0.74
DNMT3A-210ENST00000474807 HIST1H2BNQ99877 126 aa10.42□□□□□ -0.74
DNMT3A-210ENST00000474807 HIST1H2BMQ99879 126 aa10.42□□□□□ -0.74
DNMT3A-210ENST00000474807 MOBPQ13875 183 aa10.4□□□□□ -0.74
DNMT3A-210ENST00000474807 SSBP3-AS1Q7Z2R9 100 aa10.4□□□□□ -0.74
DNMT3A-210ENST00000474807 IGLV9-49A0A0B4J1Y8 123 aa10.39□□□□□ -0.75
DNMT3A-210ENST00000474807 LITAFQ99732 161 aa10.39□□□□□ -0.75
DNMT3A-210ENST00000474807 ZNF73O43830 326 aaPredicted RBP10.38□□□□□ -0.75
DNMT3A-210ENST00000474807 JOSD1Q15040 202 aaPredicted RBP10.38□□□□□ -0.75
DNMT3A-210ENST00000474807 LINC01545Q5VT33 79 aa10.38□□□□□ -0.75
DNMT3A-210ENST00000474807 RPS29P62273 56 aaKnown RBP10.37□□□□□ -0.75
DNMT3A-210ENST00000474807 KRTAP13-3Q3SY46 172 aa10.37□□□□□ -0.75
DNMT3A-210ENST00000474807 LINC00308Q8TCZ7 52 aa10.36□□□□□ -0.75
DNMT3A-210ENST00000474807 LCE2AQ5TA79 106 aaPredicted RBP10.35□□□□□ -0.75
DNMT3A-210ENST00000474807 PET117Q6UWS5 81 aa10.35□□□□□ -0.75
DNMT3A-210ENST00000474807 SPANXCQ9NY87 97 aa10.35□□□□□ -0.75
DNMT3A-210ENST00000474807 TIMM17BO60830 172 aa10.34□□□□□ -0.75
DNMT3A-210ENST00000474807 Q8N377 158 aa10.34□□□□□ -0.75
DNMT3A-210ENST00000474807 ST20-AS1Q8NBB2 130 aa10.33□□□□□ -0.76
DNMT3A-210ENST00000474807 CBY1Q9Y3M2 126 aa10.33□□□□□ -0.76
DNMT3A-210ENST00000474807 C5orf52A6NGY3 159 aa10.32□□□□□ -0.76
DNMT3A-210ENST00000474807 ZNF815PA8K554 130 aa10.31□□□□□ -0.76
DNMT3A-210ENST00000474807 C3orf79P0CE67 100 aa10.31□□□□□ -0.76
DNMT3A-210ENST00000474807 HINT1P49773 126 aaPredicted RBP10.31□□□□□ -0.76
DNMT3A-210ENST00000474807 TTTY13Q9BZ97 58 aa10.31□□□□□ -0.76
DNMT3A-210ENST00000474807 C9orf153Q5TBE3 101 aa10.29□□□□□ -0.76
DNMT3A-210ENST00000474807 OR13C6PQ8NH95 151 aa10.29□□□□□ -0.76
DNMT3A-210ENST00000474807 SLC25A20O43772 301 aa10.28□□□□□ -0.76
DNMT3A-210ENST00000474807 COA6Q5JTJ3 125 aaKnown RBP10.28□□□□□ -0.76
DNMT3A-210ENST00000474807 SPANXDQ9BXN6 97 aa10.28□□□□□ -0.76
DNMT3A-210ENST00000474807 ASB16-AS1Q495Z4 193 aa10.27□□□□□ -0.77
DNMT3A-210ENST00000474807 SPRR1BP22528 89 aa10.26□□□□□ -0.77
DNMT3A-210ENST00000474807 DHRS4-AS1Q9P1J3 65 aa10.25□□□□□ -0.77
DNMT3A-210ENST00000474807 KRTDAPP60985 99 aa10.24□□□□□ -0.77
DNMT3A-210ENST00000474807 LINC00518Q8N0U6 118 aa10.24□□□□□ -0.77
DNMT3A-210ENST00000474807 ELOF1P60002 83 aaKnown RBP10.23□□□□□ -0.77
DNMT3A-210ENST00000474807 C6orf99Q4VX62 202 aa10.22□□□□□ -0.77
DNMT3A-210ENST00000474807 ANKRD39Q53RE8 183 aa10.21□□□□□ -0.77
DNMT3A-210ENST00000474807 COX7BP24311 80 aa10.2□□□□□ -0.78
DNMT3A-210ENST00000474807 SLC25A34Q6PIV7 304 aa10.2□□□□□ -0.78
DNMT3A-210ENST00000474807 SCGB1D4Q6XE38 83 aa10.2□□□□□ -0.78
DNMT3A-210ENST00000474807 SEC61BP60468 96 aaKnown RBP10.19□□□□□ -0.78
DNMT3A-210ENST00000474807 KRTAP4-1Q9BYQ7 146 aa10.19□□□□□ -0.78
DNMT3A-210ENST00000474807 C20orf202A1L168 122 aa10.18□□□□□ -0.78
DNMT3A-210ENST00000474807 LAMTOR3Q9UHA4 124 aa10.18□□□□□ -0.78
DNMT3A-210ENST00000474807 XP32Q5T750 250 aa10.17□□□□□ -0.78
DNMT3A-210ENST00000474807 KRTAP9-2Q9BYQ4 174 aa10.17□□□□□ -0.78
DNMT3A-210ENST00000474807 TRBV7-6A0A0J9YX20 115 aa10.16□□□□□ -0.78
DNMT3A-210ENST00000474807 IFITM1P13164 125 aa10.16□□□□□ -0.78
DNMT3A-210ENST00000474807 ATOH7Q8N100 152 aa10.16□□□□□ -0.78
DNMT3A-210ENST00000474807 Q6ZVH6 145 aa10.15□□□□□ -0.78
DNMT3A-210ENST00000474807 COPS9Q8WXC6 57 aa10.15□□□□□ -0.78
DNMT3A-210ENST00000474807 TAL2Q16559 108 aa10.14□□□□□ -0.79
DNMT3A-210ENST00000474807 HRCT1Q6UXD1 115 aa10.14□□□□□ -0.79
DNMT3A-210ENST00000474807 PCP2Q8IVA1 136 aa10.14□□□□□ -0.79
DNMT3A-210ENST00000474807 LIMD2Q9BT23 127 aa10.14□□□□□ -0.79
DNMT3A-210ENST00000474807 MUSTN1Q8IVN3 82 aa10.13□□□□□ -0.79
DNMT3A-210ENST00000474807 DEFB105AQ8NG35 78 aa10.13□□□□□ -0.79
DNMT3A-210ENST00000474807 TEX49A0A1B0GTD5 131 aa10.12□□□□□ -0.79
DNMT3A-210ENST00000474807 A0A1B0GWB2 263 aa10.12□□□□□ -0.79
DNMT3A-210ENST00000474807 A6NDN8 102 aa10.12□□□□□ -0.79
DNMT3A-210ENST00000474807 Q1RN00 199 aa10.12□□□□□ -0.79
DNMT3A-210ENST00000474807 AKR1D1P51857 326 aa10.11□□□□□ -0.79
DNMT3A-210ENST00000474807 LINC01547P58512 204 aaPredicted RBP10.1□□□□□ -0.79
DNMT3A-210ENST00000474807 SMIM29Q86T20 159 aa10.1□□□□□ -0.79
DNMT3A-210ENST00000474807 IGLV5-48A0A075B6I7 105 aa10.09□□□□□ -0.79
DNMT3A-210ENST00000474807 CD164Q04900 197 aa10.09□□□□□ -0.79
DNMT3A-210ENST00000474807 PRO1933Q9H354 126 aa10.09□□□□□ -0.79
DNMT3A-210ENST00000474807 SNRPEP62304 92 aaKnown RBP10.07□□□□□ -0.8
DNMT3A-210ENST00000474807 A4D1N5 150 aa10.06□□□□□ -0.8
DNMT3A-210ENST00000474807 TRAV13-2A0A0B4J235 113 aa10.05□□□□□ -0.8
DNMT3A-210ENST00000474807 SMIM11BQ8TCY0 68 aa10.05□□□□□ -0.8
DNMT3A-210ENST00000474807 Q5XG85 94 aa10.04□□□□□ -0.8
DNMT3A-210ENST00000474807 H7C2G1 150 aa10.03□□□□□ -0.8
DNMT3A-210ENST00000474807 HIST3H2BBQ8N257 126 aa10.03□□□□□ -0.8
DNMT3A-210ENST00000474807 HIST1H2BLQ99880 126 aa10.02□□□□□ -0.81
DNMT3A-210ENST00000474807 C9orf92A6NGG3 77 aa10.01□□□□□ -0.81
DNMT3A-210ENST00000474807 NHP2Q9NX24 153 aaKnown RBP10.01□□□□□ -0.81
DNMT3A-210ENST00000474807 A0A0G2JQZ4 141 aa10□□□□□ -0.81
DNMT3A-210ENST00000474807 S100A2P29034 98 aa9.97□□□□□ -0.81
DNMT3A-210ENST00000474807 C1orf195Q5TG92 126 aa9.97□□□□□ -0.81
DNMT3A-210ENST00000474807 PCOTHQ58A44 107 aa9.96□□□□□ -0.82
DNMT3A-210ENST00000474807 LCE2CQ5TA81 110 aa9.96□□□□□ -0.82
DNMT3A-210ENST00000474807 HSBP1L1C9JCN9 74 aa9.95□□□□□ -0.82
DNMT3A-210ENST00000474807 VAMP3Q15836 100 aa9.94□□□□□ -0.82
DNMT3A-210ENST00000474807 LINC00575Q6W349 94 aa9.94□□□□□ -0.82
DNMT3A-210ENST00000474807 KRTAP19-2Q3LHN2 52 aa9.93□□□□□ -0.82
DNMT3A-210ENST00000474807 IGLV8-61A0A075B6I0 122 aa9.92□□□□□ -0.82
DNMT3A-210ENST00000474807 hADV29S1A0JD25 119 aa9.9□□□□□ -0.82
DNMT3A-210ENST00000474807 Q6ZQY7 126 aa9.9□□□□□ -0.82
DNMT3A-210ENST00000474807 F8WEM9 126 aa9.88□□□□□ -0.83
DNMT3A-210ENST00000474807 TCL1BO95988 128 aa9.88□□□□□ -0.83
DNMT3A-210ENST00000474807 S100A6P06703 90 aa9.88□□□□□ -0.83
DNMT3A-210ENST00000474807 S100A1P23297 94 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms