RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 COX8AP10176 69 aa8.08□□□□□ -1.12
CCDC78-209ENST00000474647 PFN2P35080 140 aa8.08□□□□□ -1.12
CCDC78-209ENST00000474647 BATFQ16520 125 aa8.08□□□□□ -1.12
CCDC78-209ENST00000474647 SMIM13P0DJ93 91 aa8.07□□□□□ -1.12
CCDC78-209ENST00000474647 FAM19A1Q7Z5A9 133 aa8.07□□□□□ -1.12
CCDC78-209ENST00000474647 HINT1P49773 126 aaPredicted RBP8.06□□□□□ -1.12
CCDC78-209ENST00000474647 BOD1L2Q8IYS8 172 aa8.06□□□□□ -1.12
CCDC78-209ENST00000474647 PPDPFQ9H3Y8 114 aa8.06□□□□□ -1.12
CCDC78-209ENST00000474647 DLEU1O43261 78 aa8.05□□□□□ -1.12
CCDC78-209ENST00000474647 TIMM17BO60830 172 aa8.05□□□□□ -1.12
CCDC78-209ENST00000474647 LINC00158P58513 81 aa8.05□□□□□ -1.12
CCDC78-209ENST00000474647 SCGB1D4Q6XE38 83 aa8.05□□□□□ -1.12
CCDC78-209ENST00000474647 C2orf91Q6ZV80 131 aa8.05□□□□□ -1.12
CCDC78-209ENST00000474647 LITAFQ99732 161 aa8.05□□□□□ -1.12
CCDC78-209ENST00000474647 A0A0U1RRA0 63 aa8.04□□□□□ -1.12
CCDC78-209ENST00000474647 TMEM238C9JI98 176 aa8.04□□□□□ -1.12
CCDC78-209ENST00000474647 COL5A1-AS1Q5SY13 56 aa8.04□□□□□ -1.12
CCDC78-209ENST00000474647 C3orf22Q8N5N4 141 aa8.04□□□□□ -1.12
CCDC78-209ENST00000474647 MIR7-3HGQ8N6C7 128 aa8.04□□□□□ -1.12
CCDC78-209ENST00000474647 TMEM126AQ9H061 195 aa8.04□□□□□ -1.12
CCDC78-209ENST00000474647 SND1-IT1Q9HBX3 110 aa8.03□□□□□ -1.12
CCDC78-209ENST00000474647 DAND5Q8N907 189 aa8.02□□□□□ -1.13
CCDC78-209ENST00000474647 BVES-AS1Q5T3Y7 98 aa8.01□□□□□ -1.13
CCDC78-209ENST00000474647 ADAMTSL4-AS1Q5T5F5 129 aa8.01□□□□□ -1.13
CCDC78-209ENST00000474647 SPANXDQ9BXN6 97 aa8.01□□□□□ -1.13
CCDC78-209ENST00000474647 SPANXCQ9NY87 97 aa8.01□□□□□ -1.13
CCDC78-209ENST00000474647 VPREB1P12018 145 aa8□□□□□ -1.13
CCDC78-209ENST00000474647 HIGD2AQ9BW72 106 aa8□□□□□ -1.13
CCDC78-209ENST00000474647 LOC107984156A0A0G2JMH3 177 aa7.99□□□□□ -1.13
CCDC78-209ENST00000474647 M0R378 163 aa7.99□□□□□ -1.13
CCDC78-209ENST00000474647 ARL17AQ8IVW1 177 aa7.99□□□□□ -1.13
CCDC78-209ENST00000474647 LINC00337Q8N6G1 96 aa7.99□□□□□ -1.13
CCDC78-209ENST00000474647 SPANXB1Q9NS25 103 aaPredicted RBP7.99□□□□□ -1.13
CCDC78-209ENST00000474647 Q6ZVH6 145 aa7.98□□□□□ -1.13
CCDC78-209ENST00000474647 HIGD1BQ9P298 99 aa7.98□□□□□ -1.13
CCDC78-209ENST00000474647 RPL24P83731 157 aaKnown RBP7.97□□□□□ -1.13
CCDC78-209ENST00000474647 SPAG11AQ6PDA7 123 aa7.97□□□□□ -1.13
CCDC78-209ENST00000474647 SOSTDC1Q6X4U4 206 aa7.97□□□□□ -1.13
CCDC78-209ENST00000474647 LINC00308Q8TCZ7 52 aa7.97□□□□□ -1.13
CCDC78-209ENST00000474647 IFITM1P13164 125 aa7.96□□□□□ -1.14
CCDC78-209ENST00000474647 LINC01547P58512 204 aaPredicted RBP7.96□□□□□ -1.14
CCDC78-209ENST00000474647 NPC2P61916 151 aa7.96□□□□□ -1.14
CCDC78-209ENST00000474647 C4orf48Q5BLP8 95 aa7.96□□□□□ -1.14
CCDC78-209ENST00000474647 FP248Q71RG6 208 aaPredicted RBP7.96□□□□□ -1.14
CCDC78-209ENST00000474647 Q8NDZ9 215 aa7.96□□□□□ -1.14
CCDC78-209ENST00000474647 EIF4EBP3O60516 100 aaPredicted RBP7.95□□□□□ -1.14
CCDC78-209ENST00000474647 HSD52Q0P140 79 aa7.95□□□□□ -1.14
CCDC78-209ENST00000474647 COPS9Q8WXC6 57 aa7.95□□□□□ -1.14
CCDC78-209ENST00000474647 TAX1BP3O14907 124 aa7.94□□□□□ -1.14
CCDC78-209ENST00000474647 NDUFC2O95298 119 aa7.94□□□□□ -1.14
CCDC78-209ENST00000474647 SPRR4Q96PI1 79 aa7.94□□□□□ -1.14
CCDC78-209ENST00000474647 KRTAP13-3Q3SY46 172 aa7.93□□□□□ -1.14
CCDC78-209ENST00000474647 ASB16-AS1Q495Z4 193 aa7.92□□□□□ -1.14
CCDC78-209ENST00000474647 MUSTN1Q8IVN3 82 aa7.92□□□□□ -1.14
CCDC78-209ENST00000474647 Q8NBF4 154 aa7.92□□□□□ -1.14
CCDC78-209ENST00000474647 HIST1H4GQ99525 98 aa7.92□□□□□ -1.14
CCDC78-209ENST00000474647 ZNF706Q9Y5V0 76 aaPredicted RBP7.92□□□□□ -1.14
CCDC78-209ENST00000474647 TAL2Q16559 108 aa7.91□□□□□ -1.14
CCDC78-209ENST00000474647 TRBV10-2A0A0K0K1G8 114 aa7.9□□□□□ -1.14
CCDC78-209ENST00000474647 NCR3O14931 201 aa7.9□□□□□ -1.14
CCDC78-209ENST00000474647 SEC61BP60468 96 aaKnown RBP7.89□□□□□ -1.15
CCDC78-209ENST00000474647 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
CCDC78-209ENST00000474647 A6NDN8 102 aa7.88□□□□□ -1.15
CCDC78-209ENST00000474647 FXYD2P54710 66 aa7.87□□□□□ -1.15
CCDC78-209ENST00000474647 CEND1Q8N111 149 aa7.87□□□□□ -1.15
CCDC78-209ENST00000474647 A4D1N5 150 aa7.86□□□□□ -1.15
CCDC78-209ENST00000474647 PRYO14603 147 aa7.86□□□□□ -1.15
CCDC78-209ENST00000474647 SPINK1P00995 79 aa7.86□□□□□ -1.15
CCDC78-209ENST00000474647 LCE2DQ5TA82 110 aaPredicted RBP7.86□□□□□ -1.15
CCDC78-209ENST00000474647 FSIP2Q5CZC0 6907 aa7.86□□□□□ -1.15
CCDC78-209ENST00000474647 SMCR5Q8TEV8 140 aa7.85□□□□□ -1.15
CCDC78-209ENST00000474647 TRBV10-3A0A0K0K1G6 114 aa7.84□□□□□ -1.15
CCDC78-209ENST00000474647 ETDCA0A1B0GVM5 59 aa7.84□□□□□ -1.15
CCDC78-209ENST00000474647 C9orf118A6NHY6 69 aa7.84□□□□□ -1.15
CCDC78-209ENST00000474647 IGLV6-57P01721 117 aa7.84□□□□□ -1.15
CCDC78-209ENST00000474647 IGLV9-49A0A0B4J1Y8 123 aa7.83□□□□□ -1.16
CCDC78-209ENST00000474647 TMEM238LA0A1B0GVL6 79 aa7.83□□□□□ -1.16
CCDC78-209ENST00000474647 A6NJY4 79 aa7.83□□□□□ -1.16
CCDC78-209ENST00000474647 UBE2V1Q13404 147 aa7.83□□□□□ -1.16
CCDC78-209ENST00000474647 MOBPQ13875 183 aa7.83□□□□□ -1.16
CCDC78-209ENST00000474647 VAMP3Q15836 100 aa7.83□□□□□ -1.16
CCDC78-209ENST00000474647 S100A7L2Q5SY68 101 aa7.83□□□□□ -1.16
CCDC78-209ENST00000474647 RAB37Q96AX2 223 aa7.83□□□□□ -1.16
CCDC78-209ENST00000474647 CRCT1Q9UGL9 99 aa7.83□□□□□ -1.16
CCDC78-209ENST00000474647 TRAV13-2A0A0B4J235 113 aa7.82□□□□□ -1.16
CCDC78-209ENST00000474647 GAGE2AQ6NT46 116 aa7.82□□□□□ -1.16
CCDC78-209ENST00000474647 H3BUT2 72 aa7.81□□□□□ -1.16
CCDC78-209ENST00000474647 K7ERJ3 54 aa7.81□□□□□ -1.16
CCDC78-209ENST00000474647 OR13C6PQ8NH95 151 aa7.81□□□□□ -1.16
CCDC78-209ENST00000474647 NAA38Q9BRA0 125 aaKnown RBP7.81□□□□□ -1.16
CCDC78-209ENST00000474647 KCNQ1DNQ9H478 68 aa7.81□□□□□ -1.16
CCDC78-209ENST00000474647 NHP2Q9NX24 153 aaKnown RBP7.81□□□□□ -1.16
CCDC78-209ENST00000474647 A0A0B4J2C4 111 aa7.8□□□□□ -1.16
CCDC78-209ENST00000474647 CFC1BP0CG36 223 aa7.8□□□□□ -1.16
CCDC78-209ENST00000474647 CFC1P0CG37 223 aa7.8□□□□□ -1.16
CCDC78-209ENST00000474647 Q8N377 158 aa7.8□□□□□ -1.16
CCDC78-209ENST00000474647 CBY1Q9Y3M2 126 aa7.8□□□□□ -1.16
CCDC78-209ENST00000474647 TRAV23DV6A0A075B6W5 121 aa7.79□□□□□ -1.16
CCDC78-209ENST00000474647 A0A1B0GWB2 263 aa7.79□□□□□ -1.16
CCDC78-209ENST00000474647 SPRR1AP35321 89 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms