RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 FAM30AQ9NZY2 134 aa6.52□□□□□ -1.37
COL12A1-206ENST00000474564 DNAH1Q9P2D7 4330 aa6.52□□□□□ -1.37
COL12A1-206ENST00000474564 EPM2AB3EWF7 344 aa6.51□□□□□ -1.37
COL12A1-206ENST00000474564 ZNF73O43830 326 aaPredicted RBP6.51□□□□□ -1.37
COL12A1-206ENST00000474564 MTURNQ8N3F0 131 aa6.51□□□□□ -1.37
COL12A1-206ENST00000474564 TRBV7-6A0A0J9YX20 115 aa6.5□□□□□ -1.37
COL12A1-206ENST00000474564 F8W1H4 67 aa6.5□□□□□ -1.37
COL12A1-206ENST00000474564 LST1O00453 97 aa6.5□□□□□ -1.37
COL12A1-206ENST00000474564 COX7BP24311 80 aa6.5□□□□□ -1.37
COL12A1-206ENST00000474564 UBE2AP49459 152 aa6.49□□□□□ -1.37
COL12A1-206ENST00000474564 KRTAP7-1Q8IUC3 87 aa6.49□□□□□ -1.37
COL12A1-206ENST00000474564 TRACP01848 142 aa6.48□□□□□ -1.37
COL12A1-206ENST00000474564 FAM19A1Q7Z5A9 133 aa6.48□□□□□ -1.37
COL12A1-206ENST00000474564 FAM229AH3BQW9 127 aa6.47□□□□□ -1.37
COL12A1-206ENST00000474564 BCE1O60756 84 aa6.47□□□□□ -1.37
COL12A1-206ENST00000474564 CDK2AP2O75956 126 aa6.47□□□□□ -1.37
COL12A1-206ENST00000474564 GHRHP01286 108 aa6.47□□□□□ -1.37
COL12A1-206ENST00000474564 DNAH6Q9C0G6 4158 aa6.47□□□□□ -1.37
COL12A1-206ENST00000474564 KMT2AQ03164 3969 aa6.47□□□□□ -1.37
COL12A1-206ENST00000474564 A0A1B0GX51 115 aa6.46□□□□□ -1.38
COL12A1-206ENST00000474564 H3BT86 120 aa6.46□□□□□ -1.38
COL12A1-206ENST00000474564 INAFM2P0DMQ5 153 aa6.46□□□□□ -1.38
COL12A1-206ENST00000474564 C1orf137Q5JT78 98 aa6.46□□□□□ -1.38
COL12A1-206ENST00000474564 ORMDL1Q9P0S3 153 aa6.46□□□□□ -1.38
COL12A1-206ENST00000474564 DHRS4-AS1Q9P1J3 65 aa6.46□□□□□ -1.38
COL12A1-206ENST00000474564 hADV29S1A0JD25 119 aa6.45□□□□□ -1.38
COL12A1-206ENST00000474564 ANKRD29Q8N6D5 301 aa6.45□□□□□ -1.38
COL12A1-206ENST00000474564 FAM218AQ96MZ4 157 aa6.45□□□□□ -1.38
COL12A1-206ENST00000474564 PSORS1C2Q9UIG4 136 aa6.45□□□□□ -1.38
COL12A1-206ENST00000474564 H0Y9J4 135 aa6.44□□□□□ -1.38
COL12A1-206ENST00000474564 PLA2G1BP04054 148 aaKnown RBP6.44□□□□□ -1.38
COL12A1-206ENST00000474564 SPRR1AP35321 89 aa6.44□□□□□ -1.38
COL12A1-206ENST00000474564 XGP55808 180 aa6.44□□□□□ -1.38
COL12A1-206ENST00000474564 RPL37AP61513 92 aaKnown RBP6.44□□□□□ -1.38
COL12A1-206ENST00000474564 BAALC-AS2P0C853 105 aa6.43□□□□□ -1.38
COL12A1-206ENST00000474564 ELOF1P60002 83 aaKnown RBP6.43□□□□□ -1.38
COL12A1-206ENST00000474564 HAMPP81172 84 aa6.43□□□□□ -1.38
COL12A1-206ENST00000474564 LINC00575Q6W349 94 aa6.43□□□□□ -1.38
COL12A1-206ENST00000474564 Q6ZRX8 168 aa6.43□□□□□ -1.38
COL12A1-206ENST00000474564 LINC00528Q8N1L1 170 aa6.43□□□□□ -1.38
COL12A1-206ENST00000474564 B5MCH6 92 aa6.42□□□□□ -1.38
COL12A1-206ENST00000474564 J3QR89 54 aa6.42□□□□□ -1.38
COL12A1-206ENST00000474564 ETDBQ3ZM63 59 aa6.42□□□□□ -1.38
COL12A1-206ENST00000474564 H3BQ85 93 aa6.41□□□□□ -1.38
COL12A1-206ENST00000474564 SMR3BP02814 79 aaPredicted RBP6.41□□□□□ -1.38
COL12A1-206ENST00000474564 IGLV7-43P04211 117 aa6.41□□□□□ -1.38
COL12A1-206ENST00000474564 HIGD2AQ9BW72 106 aa6.41□□□□□ -1.38
COL12A1-206ENST00000474564 ZNF861PO60384 105 aa6.4□□□□□ -1.38
COL12A1-206ENST00000474564 PRLHP81277 87 aa6.4□□□□□ -1.38
COL12A1-206ENST00000474564 OCIAD2Q56VL3 154 aa6.4□□□□□ -1.38
COL12A1-206ENST00000474564 TEN1Q86WV5 123 aa6.4□□□□□ -1.38
COL12A1-206ENST00000474564 PRO0461Q9UI25 63 aa6.4□□□□□ -1.38
COL12A1-206ENST00000474564 ZNF706Q9Y5V0 76 aaPredicted RBP6.4□□□□□ -1.38
COL12A1-206ENST00000474564 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
COL12A1-206ENST00000474564 TMEM256-PLSCR3K7ERE1 68 aa6.39□□□□□ -1.39
COL12A1-206ENST00000474564 K7ERU9 68 aa6.39□□□□□ -1.39
COL12A1-206ENST00000474564 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.39□□□□□ -1.39
COL12A1-206ENST00000474564 Q6ZQY7 126 aa6.39□□□□□ -1.39
COL12A1-206ENST00000474564 PPDPFLQ8WWR9 84 aa6.39□□□□□ -1.39
COL12A1-206ENST00000474564 LAMTOR3Q9UHA4 124 aa6.39□□□□□ -1.39
COL12A1-206ENST00000474564 SMCPP49901 116 aaPredicted RBP6.38□□□□□ -1.39
COL12A1-206ENST00000474564 KRTAP11-1Q8IUC1 163 aa6.38□□□□□ -1.39
COL12A1-206ENST00000474564 SMCR5Q8TEV8 140 aa6.38□□□□□ -1.39
COL12A1-206ENST00000474564 A0A1B0GV72 72 aa6.37□□□□□ -1.39
COL12A1-206ENST00000474564 SPINK6Q6UWN8 80 aa6.36□□□□□ -1.39
COL12A1-206ENST00000474564 DEFB105AQ8NG35 78 aa6.36□□□□□ -1.39
COL12A1-206ENST00000474564 SACSQ9NZJ4 4579 aa6.36□□□□□ -1.39
COL12A1-206ENST00000474564 DNAH17Q9UFH2 4485 aa6.35□□□□□ -1.39
COL12A1-206ENST00000474564 DNAH10Q8IVF4 4471 aa6.35□□□□□ -1.39
COL12A1-206ENST00000474564 JMJD7-PLA2G4BH0Y9G9 81 aa6.34□□□□□ -1.39
COL12A1-206ENST00000474564 Q9BRP9 147 aa6.34□□□□□ -1.39
COL12A1-206ENST00000474564 HYDINQ4G0P3 5121 aa6.34□□□□□ -1.4
COL12A1-206ENST00000474564 TEX49A0A1B0GTD5 131 aa6.33□□□□□ -1.4
COL12A1-206ENST00000474564 F8WEM9 126 aa6.33□□□□□ -1.4
COL12A1-206ENST00000474564 DNAH2Q9P225 4427 aa6.33□□□□□ -1.4
COL12A1-206ENST00000474564 Q5VSD8 79 aa6.32□□□□□ -1.4
COL12A1-206ENST00000474564 KRTAP13-1Q8IUC0 172 aa6.32□□□□□ -1.4
COL12A1-206ENST00000474564 Q8N1X5 172 aa6.32□□□□□ -1.4
COL12A1-206ENST00000474564 KMT2CQ8NEZ4 4911 aaKnown RBP6.31□□□□□ -1.4
COL12A1-206ENST00000474564 GAGE2AQ6NT46 116 aa6.31□□□□□ -1.4
COL12A1-206ENST00000474564 LINC01600Q96MT4 127 aa6.31□□□□□ -1.4
COL12A1-206ENST00000474564 FRAS1Q86XX4 4008 aa6.3□□□□□ -1.4
COL12A1-206ENST00000474564 DSCR8Q96T75 97 aa6.3□□□□□ -1.4
COL12A1-206ENST00000474564 C14orf132Q9NPU4 83 aa6.3□□□□□ -1.4
COL12A1-206ENST00000474564 RYR2Q92736 4967 aa6.3□□□□□ -1.4
COL12A1-206ENST00000474564 ERC2-IT1O76042 136 aa6.29□□□□□ -1.4
COL12A1-206ENST00000474564 NDUFV3P56181 108 aaKnown RBP6.29□□□□□ -1.4
COL12A1-206ENST00000474564 RBM3P98179 157 aaKnown RBP6.29□□□□□ -1.4
COL12A1-206ENST00000474564 SPRR4Q96PI1 79 aa6.29□□□□□ -1.4
COL12A1-206ENST00000474564 VPS25Q9BRG1 176 aa6.29□□□□□ -1.4
COL12A1-206ENST00000474564 ST20-AS1Q8NBB2 130 aa6.28□□□□□ -1.4
COL12A1-206ENST00000474564 IGLV5-48A0A075B6I7 105 aa6.27□□□□□ -1.41
COL12A1-206ENST00000474564 SPRR1BP22528 89 aa6.26□□□□□ -1.41
COL12A1-206ENST00000474564 C21orf62-AS1Q17RA5 79 aa6.26□□□□□ -1.41
COL12A1-206ENST00000474564 FAM229BQ4G0N7 80 aa6.26□□□□□ -1.41
COL12A1-206ENST00000474564 FAT2Q9NYQ8 4349 aa6.26□□□□□ -1.41
COL12A1-206ENST00000474564 PKD1P98161 4303 aa6.25□□□□□ -1.41
COL12A1-206ENST00000474564 CRYGAP11844 174 aa6.25□□□□□ -1.41
COL12A1-206ENST00000474564 PDE6GP18545 87 aa6.25□□□□□ -1.41
COL12A1-206ENST00000474564 Q8N377 158 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms