RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 LRP2P98164 4655 aa11.83□□□□□ -0.52
HLA-B-252ENST00000474381 TRAV23DV6A0A075B6W5 121 aa11.83□□□□□ -0.52
HLA-B-252ENST00000474381 ATOH7Q8N100 152 aa11.83□□□□□ -0.52
HLA-B-252ENST00000474381 SMCR5Q8TEV8 140 aa11.83□□□□□ -0.52
HLA-B-252ENST00000474381 S100A6P06703 90 aa11.82□□□□□ -0.52
HLA-B-252ENST00000474381 SCGB1D4Q6XE38 83 aa11.81□□□□□ -0.52
HLA-B-252ENST00000474381 Q6ZRX8 168 aa11.81□□□□□ -0.52
HLA-B-252ENST00000474381 SPANXDQ9BXN6 97 aa11.81□□□□□ -0.52
HLA-B-252ENST00000474381 CTAG1AP78358 180 aa11.8□□□□□ -0.52
HLA-B-252ENST00000474381 TSPAN13O95857 204 aa11.79□□□□□ -0.52
HLA-B-252ENST00000474381 JOSD1Q15040 202 aaPredicted RBP11.79□□□□□ -0.52
HLA-B-252ENST00000474381 LINC00304Q8N9R0 145 aa11.79□□□□□ -0.52
HLA-B-252ENST00000474381 ZNF73O43830 326 aaPredicted RBP11.78□□□□□ -0.52
HLA-B-252ENST00000474381 Q6ZVH6 145 aa11.78□□□□□ -0.52
HLA-B-252ENST00000474381 LINC00518Q8N0U6 118 aa11.78□□□□□ -0.52
HLA-B-252ENST00000474381 COPS9Q8WXC6 57 aa11.78□□□□□ -0.52
HLA-B-252ENST00000474381 PPDPFQ9H3Y8 114 aa11.78□□□□□ -0.52
HLA-B-252ENST00000474381 Q9BRP9 147 aa11.77□□□□□ -0.53
HLA-B-252ENST00000474381 IFITM1P13164 125 aa11.76□□□□□ -0.53
HLA-B-252ENST00000474381 LINC00483Q53H64 154 aa11.76□□□□□ -0.53
HLA-B-252ENST00000474381 PCP2Q8IVA1 136 aa11.76□□□□□ -0.53
HLA-B-252ENST00000474381 C3orf22Q8N5N4 141 aa11.76□□□□□ -0.53
HLA-B-252ENST00000474381 HINT1P49773 126 aaPredicted RBP11.75□□□□□ -0.53
HLA-B-252ENST00000474381 OR13C6PQ8NH95 151 aa11.75□□□□□ -0.53
HLA-B-252ENST00000474381 ERC2-IT1O76042 136 aa11.74□□□□□ -0.53
HLA-B-252ENST00000474381 PRR4Q16378 134 aa11.74□□□□□ -0.53
HLA-B-252ENST00000474381 HSBP1L1C9JCN9 74 aa11.72□□□□□ -0.53
HLA-B-252ENST00000474381 SPAG11AQ6PDA7 123 aa11.71□□□□□ -0.53
HLA-B-252ENST00000474381 C5orf52A6NGY3 159 aa11.7□□□□□ -0.54
HLA-B-252ENST00000474381 GAGE2AQ6NT46 116 aa11.7□□□□□ -0.54
HLA-B-252ENST00000474381 MUSTN1Q8IVN3 82 aa11.67□□□□□ -0.54
HLA-B-252ENST00000474381 DHRS4-AS1Q9P1J3 65 aa11.66□□□□□ -0.54
HLA-B-252ENST00000474381 LPAP08519 4548 aa11.65□□□□□ -0.54
HLA-B-252ENST00000474381 ELOF1P60002 83 aaKnown RBP11.64□□□□□ -0.55
HLA-B-252ENST00000474381 C6orf99Q4VX62 202 aa11.64□□□□□ -0.55
HLA-B-252ENST00000474381 C4orf48Q5BLP8 95 aa11.64□□□□□ -0.55
HLA-B-252ENST00000474381 Q8NBF4 154 aa11.64□□□□□ -0.55
HLA-B-252ENST00000474381 TRBV7-6A0A0J9YX20 115 aa11.63□□□□□ -0.55
HLA-B-252ENST00000474381 SCGB1D1O95968 90 aa11.62□□□□□ -0.55
HLA-B-252ENST00000474381 COX7BP24311 80 aa11.62□□□□□ -0.55
HLA-B-252ENST00000474381 SSBP3-AS1Q7Z2R9 100 aa11.62□□□□□ -0.55
HLA-B-252ENST00000474381 A6NDN8 102 aa11.61□□□□□ -0.55
HLA-B-252ENST00000474381 IGLV9-49A0A0B4J1Y8 123 aa11.6□□□□□ -0.55
HLA-B-252ENST00000474381 TRAV13-2A0A0B4J235 113 aa11.6□□□□□ -0.55
HLA-B-252ENST00000474381 SPINK1P00995 79 aa11.6□□□□□ -0.55
HLA-B-252ENST00000474381 MOBPQ13875 183 aa11.6□□□□□ -0.55
HLA-B-252ENST00000474381 ST20-AS1Q8NBB2 130 aa11.59□□□□□ -0.55
HLA-B-252ENST00000474381 RETNLBQ9BQ08 111 aa11.59□□□□□ -0.55
HLA-B-252ENST00000474381 SPRR1BP22528 89 aa11.58□□□□□ -0.56
HLA-B-252ENST00000474381 A0A1B0GWB2 263 aa11.57□□□□□ -0.56
HLA-B-252ENST00000474381 RPS29P62273 56 aaKnown RBP11.56□□□□□ -0.56
HLA-B-252ENST00000474381 SLC25A34Q6PIV7 304 aa11.56□□□□□ -0.56
HLA-B-252ENST00000474381 RNF213Q63HN8 5207 aa11.54□□□□□ -0.56
HLA-B-252ENST00000474381 A4D1N5 150 aa11.54□□□□□ -0.56
HLA-B-252ENST00000474381 COX8AP10176 69 aa11.54□□□□□ -0.56
HLA-B-252ENST00000474381 DLEU1O43261 78 aa11.53□□□□□ -0.56
HLA-B-252ENST00000474381 IGLV7-46A0A075B6I9 117 aa11.52□□□□□ -0.57
HLA-B-252ENST00000474381 TPRXLQ17RH7 258 aa11.52□□□□□ -0.57
HLA-B-252ENST00000474381 C9orf153Q5TBE3 101 aa11.52□□□□□ -0.57
HLA-B-252ENST00000474381 FP248Q71RG6 208 aaPredicted RBP11.52□□□□□ -0.57
HLA-B-252ENST00000474381 SMIM11BQ8TCY0 68 aa11.51□□□□□ -0.57
HLA-B-252ENST00000474381 HIST1H4GQ99525 98 aa11.49□□□□□ -0.57
HLA-B-252ENST00000474381 NHP2Q9NX24 153 aaKnown RBP11.49□□□□□ -0.57
HLA-B-252ENST00000474381 LAMTOR3Q9UHA4 124 aa11.49□□□□□ -0.57
HLA-B-252ENST00000474381 TAL2Q16559 108 aa11.48□□□□□ -0.57
HLA-B-252ENST00000474381 TEX49A0A1B0GTD5 131 aa11.47□□□□□ -0.57
HLA-B-252ENST00000474381 IGLV5-48A0A075B6I7 105 aa11.45□□□□□ -0.58
HLA-B-252ENST00000474381 VAMP3Q15836 100 aa11.45□□□□□ -0.58
HLA-B-252ENST00000474381 Q8N377 158 aa11.45□□□□□ -0.58
HLA-B-252ENST00000474381 VAMP8Q9BV40 100 aa11.45□□□□□ -0.58
HLA-B-252ENST00000474381 PAM16Q9Y3D7 125 aa11.45□□□□□ -0.58
HLA-B-252ENST00000474381 SPATA45Q537H7 98 aa11.44□□□□□ -0.58
HLA-B-252ENST00000474381 DEFB105AQ8NG35 78 aa11.44□□□□□ -0.58
HLA-B-252ENST00000474381 C14orf144Q96I85 54 aa11.44□□□□□ -0.58
HLA-B-252ENST00000474381 SLC25A20O43772 301 aa11.43□□□□□ -0.58
HLA-B-252ENST00000474381 CDIP1Q9H305 208 aa11.43□□□□□ -0.58
HLA-B-252ENST00000474381 HIGD1BQ9P298 99 aa11.43□□□□□ -0.58
HLA-B-252ENST00000474381 LINC01547P58512 204 aaPredicted RBP11.42□□□□□ -0.58
HLA-B-252ENST00000474381 Q1RN00 199 aa11.4□□□□□ -0.58
HLA-B-252ENST00000474381 LINC00575Q6W349 94 aa11.39□□□□□ -0.59
HLA-B-252ENST00000474381 SMIM29Q86T20 159 aa11.38□□□□□ -0.59
HLA-B-252ENST00000474381 C12orf57Q99622 126 aa11.38□□□□□ -0.59
HLA-B-252ENST00000474381 PRO1933Q9H354 126 aa11.38□□□□□ -0.59
HLA-B-252ENST00000474381 CD164Q04900 197 aa11.36□□□□□ -0.59
HLA-B-252ENST00000474381 BVES-AS1Q5T3Y7 98 aa11.36□□□□□ -0.59
HLA-B-252ENST00000474381 C2orf91Q6ZV80 131 aa11.36□□□□□ -0.59
HLA-B-252ENST00000474381 LIMD2Q9BT23 127 aa11.36□□□□□ -0.59
HLA-B-252ENST00000474381 KRTAP13-3Q3SY46 172 aa11.35□□□□□ -0.59
HLA-B-252ENST00000474381 hADV29S1A0JD25 119 aa11.34□□□□□ -0.59
HLA-B-252ENST00000474381 CFC1BP0CG36 223 aa11.33□□□□□ -0.6
HLA-B-252ENST00000474381 CFC1P0CG37 223 aa11.33□□□□□ -0.6
HLA-B-252ENST00000474381 A0A0B4J2C4 111 aa11.32□□□□□ -0.6
HLA-B-252ENST00000474381 PYY3Q5JQD4 70 aa11.32□□□□□ -0.6
HLA-B-252ENST00000474381 Q6ZQY7 126 aa11.31□□□□□ -0.6
HLA-B-252ENST00000474381 RAB37Q96AX2 223 aa11.31□□□□□ -0.6
HLA-B-252ENST00000474381 H7C2G1 150 aa11.3□□□□□ -0.6
HLA-B-252ENST00000474381 HRCT1Q6UXD1 115 aa11.3□□□□□ -0.6
HLA-B-252ENST00000474381 CEND1Q8N111 149 aa11.29□□□□□ -0.6
HLA-B-252ENST00000474381 TMEM238LA0A1B0GVL6 79 aa11.28□□□□□ -0.6
HLA-B-252ENST00000474381 A6NJY4 79 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms