RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 IGLV11-55A0A075B6I3 123 aa4.9□□□□□ -1.63
GPNMB-209ENST00000474157 XAGE1AQ9HD64 81 aa4.9□□□□□ -1.63
GPNMB-209ENST00000474157 LINC01558Q9Y6Z2 57 aa4.9□□□□□ -1.63
GPNMB-209ENST00000474157 IGHV4-30-2A0A087WSY4 118 aa4.89□□□□□ -1.63
GPNMB-209ENST00000474157 A0A096LNT2 108 aa4.89□□□□□ -1.63
GPNMB-209ENST00000474157 ETDCA0A1B0GVM5 59 aa4.89□□□□□ -1.63
GPNMB-209ENST00000474157 Q6ZTI0 123 aa4.89□□□□□ -1.63
GPNMB-209ENST00000474157 MUC7Q8TAX7 377 aa4.89□□□□□ -1.63
GPNMB-209ENST00000474157 FAM104AQ969W3 186 aa4.89□□□□□ -1.63
GPNMB-209ENST00000474157 TENM1Q9UKZ4 2725 aa4.89□□□□□ -1.63
GPNMB-209ENST00000474157 DSCAML1Q8TD84 2053 aa4.88□□□□□ -1.63
GPNMB-209ENST00000474157 PRKDCP78527 4128 aaKnown RBP4.88□□□□□ -1.63
GPNMB-209ENST00000474157 IGHV3-73A0A0B4J1V6 119 aa4.88□□□□□ -1.63
GPNMB-209ENST00000474157 IGHV3-16A0A0C4DH30 117 aa4.88□□□□□ -1.63
GPNMB-209ENST00000474157 LRCOL1A6NCL2 159 aa4.88□□□□□ -1.63
GPNMB-209ENST00000474157 K7EQD1 137 aa4.88□□□□□ -1.63
GPNMB-209ENST00000474157 IGKV4-1P06312 121 aa4.88□□□□□ -1.63
GPNMB-209ENST00000474157 CNBPP62633 177 aaKnown RBP4.88□□□□□ -1.63
GPNMB-209ENST00000474157 ARFGEF3Q5TH69 2177 aa4.88□□□□□ -1.63
GPNMB-209ENST00000474157 TRGV2A0A075B6R0 118 aa4.87□□□□□ -1.63
GPNMB-209ENST00000474157 IGHV3-21A0A0B4J1V1 117 aa4.87□□□□□ -1.63
GPNMB-209ENST00000474157 SMIM1B2RUZ4 78 aa4.87□□□□□ -1.63
GPNMB-209ENST00000474157 IGKV3-15P01624 115 aa4.87□□□□□ -1.63
GPNMB-209ENST00000474157 IGHV1-2P23083 117 aa4.87□□□□□ -1.63
GPNMB-209ENST00000474157 COX7BP24311 80 aa4.87□□□□□ -1.63
GPNMB-209ENST00000474157 GAFA1Q96PS6 74 aa4.87□□□□□ -1.63
GPNMB-209ENST00000474157 LINC00467Q9BRT7 94 aa4.87□□□□□ -1.63
GPNMB-209ENST00000474157 TRRAPQ9Y4A5 3859 aa4.87□□□□□ -1.63
GPNMB-209ENST00000474157 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.86□□□□□ -1.63
GPNMB-209ENST00000474157 A0A1B0GUV1 79 aa4.86□□□□□ -1.63
GPNMB-209ENST00000474157 BSPH1Q075Z2 132 aa4.86□□□□□ -1.63
GPNMB-209ENST00000474157 LINC00575Q6W349 94 aa4.86□□□□□ -1.63
GPNMB-209ENST00000474157 NPBQ8NG41 125 aa4.86□□□□□ -1.63
GPNMB-209ENST00000474157 PLAC8Q9NZF1 115 aa4.86□□□□□ -1.63
GPNMB-209ENST00000474157 CLPSL1A2RUU4 121 aa4.85□□□□□ -1.63
GPNMB-209ENST00000474157 CCL18P55774 89 aa4.85□□□□□ -1.63
GPNMB-209ENST00000474157 LINC00242Q5T6M2 205 aa4.85□□□□□ -1.63
GPNMB-209ENST00000474157 S4R3C0 116 aa4.85□□□□□ -1.63
GPNMB-209ENST00000474157 IGHV7-81A0A0B4J1V7 117 aa4.84□□□□□ -1.63
GPNMB-209ENST00000474157 NDUFA4O00483 81 aa4.84□□□□□ -1.63
GPNMB-209ENST00000474157 IGHV3-53P01767 116 aa4.84□□□□□ -1.63
GPNMB-209ENST00000474157 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.84□□□□□ -1.63
GPNMB-209ENST00000474157 CHCHD7Q9BUK0 85 aa4.84□□□□□ -1.63
GPNMB-209ENST00000474157 KCNQ1DNQ9H478 68 aa4.84□□□□□ -1.63
GPNMB-209ENST00000474157 ZNF706Q9Y5V0 76 aaPredicted RBP4.84□□□□□ -1.63
GPNMB-209ENST00000474157 A8MU10 97 aa4.83□□□□□ -1.64
GPNMB-209ENST00000474157 LINC00158P58513 81 aa4.83□□□□□ -1.64
GPNMB-209ENST00000474157 RNASE13Q5GAN3 156 aaKnown RBP4.83□□□□□ -1.64
GPNMB-209ENST00000474157 C11orf71Q6IPW1 123 aa4.83□□□□□ -1.64
GPNMB-209ENST00000474157 COX7B2Q8TF08 81 aa4.83□□□□□ -1.64
GPNMB-209ENST00000474157 WFDC10AQ9H1F0 79 aa4.83□□□□□ -1.64
GPNMB-209ENST00000474157 VWFP04275 2813 aa4.82□□□□□ -1.64
GPNMB-209ENST00000474157 CR1P17927 2039 aa4.82□□□□□ -1.64
GPNMB-209ENST00000474157 BIRC6Q9NR09 4857 aa4.82□□□□□ -1.64
GPNMB-209ENST00000474157 IGLV1-44P01699 117 aa4.82□□□□□ -1.64
GPNMB-209ENST00000474157 TFF1P04155 84 aa4.82□□□□□ -1.64
GPNMB-209ENST00000474157 KRTAP10-11P60412 298 aa4.82□□□□□ -1.64
GPNMB-209ENST00000474157 COX17Q14061 63 aa4.82□□□□□ -1.64
GPNMB-209ENST00000474157 PRR9Q5T870 116 aa4.82□□□□□ -1.64
GPNMB-209ENST00000474157 ZNF702PQ9H963 129 aa4.82□□□□□ -1.64
GPNMB-209ENST00000474157 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.81□□□□□ -1.64
GPNMB-209ENST00000474157 LMO4P61968 165 aa4.81□□□□□ -1.64
GPNMB-209ENST00000474157 IGLV1-47P01700 117 aa4.8□□□□□ -1.64
GPNMB-209ENST00000474157 IGHV4-59P01825 116 aa4.8□□□□□ -1.64
GPNMB-209ENST00000474157 IGHV1-8P0DP01 117 aa4.8□□□□□ -1.64
GPNMB-209ENST00000474157 HIGD2BQ4VC39 106 aa4.8□□□□□ -1.64
GPNMB-209ENST00000474157 KAAG1Q9UBP8 84 aa4.8□□□□□ -1.64
GPNMB-209ENST00000474157 ARHGAP32A7KAX9 2087 aa4.8□□□□□ -1.64
GPNMB-209ENST00000474157 IGLV4-60A0A075B6I1 120 aa4.79□□□□□ -1.64
GPNMB-209ENST00000474157 IGHV3OR16-12A0A075B7B8 117 aa4.79□□□□□ -1.64
GPNMB-209ENST00000474157 IGHV3-72A0A0B4J1Y9 119 aa4.79□□□□□ -1.64
GPNMB-209ENST00000474157 IGLV1-51P01701 117 aa4.79□□□□□ -1.64
GPNMB-209ENST00000474157 COX6A2Q02221 97 aa4.79□□□□□ -1.64
GPNMB-209ENST00000474157 SPAG11BQ08648 103 aa4.79□□□□□ -1.64
GPNMB-209ENST00000474157 SMIM29Q86T20 159 aa4.79□□□□□ -1.64
GPNMB-209ENST00000474157 IGHV3-35A0A0C4DH35 117 aa4.78□□□□□ -1.64
GPNMB-209ENST00000474157 IGHV4-61A0A0C4DH41 118 aa4.78□□□□□ -1.64
GPNMB-209ENST00000474157 IGHV3-64DA0A0J9YX35 117 aa4.78□□□□□ -1.64
GPNMB-209ENST00000474157 RTL8CO15255 209 aa4.78□□□□□ -1.64
GPNMB-209ENST00000474157 IGHV1-46P01743 117 aa4.78□□□□□ -1.64
GPNMB-209ENST00000474157 TNCP24821 2201 aa4.78□□□□□ -1.64
GPNMB-209ENST00000474157 IGHV3-66A0A0C4DH42 116 aa4.76□□□□□ -1.65
GPNMB-209ENST00000474157 MALRD1Q5VYJ5 2156 aa4.76□□□□□ -1.65
GPNMB-209ENST00000474157 CHCHD10Q8WYQ3 142 aaPredicted RBP4.76□□□□□ -1.65
GPNMB-209ENST00000474157 IGLV7-46A0A075B6I9 117 aa4.75□□□□□ -1.65
GPNMB-209ENST00000474157 APELAP0DMC3 54 aa4.75□□□□□ -1.65
GPNMB-209ENST00000474157 CCL3L1P16619 93 aa4.75□□□□□ -1.65
GPNMB-209ENST00000474157 KPRPQ5T749 579 aaPredicted RBP4.75□□□□□ -1.65
GPNMB-209ENST00000474157 LINC01006Q8NI28 216 aa4.75□□□□□ -1.65
GPNMB-209ENST00000474157 ZNRD1Q9P1U0 126 aa4.75□□□□□ -1.65
GPNMB-209ENST00000474157 EPPK1P58107 5090 aaKnown RBP4.74□□□□□ -1.65
GPNMB-209ENST00000474157 IGHV3OR16-13A0A075B7E8 117 aa4.74□□□□□ -1.65
GPNMB-209ENST00000474157 IGHV3OR16-8A0A075B7F1 116 aa4.74□□□□□ -1.65
GPNMB-209ENST00000474157 ATP6V0E1O15342 81 aa4.74□□□□□ -1.65
GPNMB-209ENST00000474157 IGHV3-23P01764 117 aa4.74□□□□□ -1.65
GPNMB-209ENST00000474157 SPAG11AQ6PDA7 123 aa4.74□□□□□ -1.65
GPNMB-209ENST00000474157 WNK2Q9Y3S1 2297 aa4.74□□□□□ -1.65
GPNMB-209ENST00000474157 IGLV9-49A0A0B4J1Y8 123 aa4.73□□□□□ -1.65
GPNMB-209ENST00000474157 B4DSR2 109 aa4.73□□□□□ -1.65
GPNMB-209ENST00000474157 LYNX1G3V0Z9 82 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms