RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 KRTAP10-1P60331 282 aa6.49□□□□□ -1.37
PRPF38A-202ENST00000474048 KCNQ1DNQ9H478 68 aa6.49□□□□□ -1.37
PRPF38A-202ENST00000474048 SPCS1Q9Y6A9 102 aa6.49□□□□□ -1.37
PRPF38A-202ENST00000474048 A0A1B0GVY2 172 aa6.48□□□□□ -1.37
PRPF38A-202ENST00000474048 ATXN8Q156A1 80 aa6.48□□□□□ -1.37
PRPF38A-202ENST00000474048 DNAH10Q8IVF4 4471 aa6.48□□□□□ -1.37
PRPF38A-202ENST00000474048 TRBV7-6A0A0J9YX20 115 aa6.47□□□□□ -1.37
PRPF38A-202ENST00000474048 UBE2AP49459 152 aa6.47□□□□□ -1.37
PRPF38A-202ENST00000474048 SCXQ7RTU7 201 aa6.47□□□□□ -1.37
PRPF38A-202ENST00000474048 FAM19A1Q7Z5A9 133 aa6.47□□□□□ -1.37
PRPF38A-202ENST00000474048 Q6ZSA8 131 aa6.46□□□□□ -1.38
PRPF38A-202ENST00000474048 CIRBP-AS1Q8TBR5 109 aa6.46□□□□□ -1.38
PRPF38A-202ENST00000474048 KRTAP7-1Q8IUC3 87 aa6.45□□□□□ -1.38
PRPF38A-202ENST00000474048 CLEC2BQ92478 149 aa6.45□□□□□ -1.38
PRPF38A-202ENST00000474048 DHRS4-AS1Q9P1J3 65 aa6.45□□□□□ -1.38
PRPF38A-202ENST00000474048 A0A1B0GV90 55 aa6.44□□□□□ -1.38
PRPF38A-202ENST00000474048 A0A1B0GX51 115 aa6.44□□□□□ -1.38
PRPF38A-202ENST00000474048 ELOF1P60002 83 aaKnown RBP6.44□□□□□ -1.38
PRPF38A-202ENST00000474048 FAM30AQ9NZY2 134 aa6.44□□□□□ -1.38
PRPF38A-202ENST00000474048 HYDINQ4G0P3 5121 aa6.44□□□□□ -1.38
PRPF38A-202ENST00000474048 hADV29S1A0JD25 119 aa6.43□□□□□ -1.38
PRPF38A-202ENST00000474048 K7EP34 96 aa6.43□□□□□ -1.38
PRPF38A-202ENST00000474048 BCE1O60756 84 aa6.43□□□□□ -1.38
PRPF38A-202ENST00000474048 C1orf137Q5JT78 98 aa6.43□□□□□ -1.38
PRPF38A-202ENST00000474048 Q6ZRX8 168 aa6.43□□□□□ -1.38
PRPF38A-202ENST00000474048 LST1O00453 97 aa6.42□□□□□ -1.38
PRPF38A-202ENST00000474048 TCL1BO95988 128 aa6.42□□□□□ -1.38
PRPF38A-202ENST00000474048 HAMPP81172 84 aa6.42□□□□□ -1.38
PRPF38A-202ENST00000474048 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
PRPF38A-202ENST00000474048 SACSQ9NZJ4 4579 aa6.41□□□□□ -1.38
PRPF38A-202ENST00000474048 EPM2AB3EWF7 344 aa6.41□□□□□ -1.38
PRPF38A-202ENST00000474048 B5MCH6 92 aa6.41□□□□□ -1.38
PRPF38A-202ENST00000474048 TRACP01848 142 aa6.41□□□□□ -1.38
PRPF38A-202ENST00000474048 INAFM2P0DMQ5 153 aa6.41□□□□□ -1.38
PRPF38A-202ENST00000474048 SPRR1AP35321 89 aa6.41□□□□□ -1.38
PRPF38A-202ENST00000474048 LINC00575Q6W349 94 aa6.41□□□□□ -1.38
PRPF38A-202ENST00000474048 HIGD2AQ9BW72 106 aa6.41□□□□□ -1.38
PRPF38A-202ENST00000474048 DNAH2Q9P225 4427 aa6.41□□□□□ -1.38
PRPF38A-202ENST00000474048 H3BMG7 143 aa6.4□□□□□ -1.38
PRPF38A-202ENST00000474048 H3BQ85 93 aa6.4□□□□□ -1.38
PRPF38A-202ENST00000474048 PRLHP81277 87 aa6.4□□□□□ -1.38
PRPF38A-202ENST00000474048 PSORS1C2Q9UIG4 136 aa6.4□□□□□ -1.38
PRPF38A-202ENST00000474048 FRAS1Q86XX4 4008 aa6.39□□□□□ -1.39
PRPF38A-202ENST00000474048 DNAH17Q9UFH2 4485 aa6.39□□□□□ -1.39
PRPF38A-202ENST00000474048 C9JAW5 83 aa6.39□□□□□ -1.39
PRPF38A-202ENST00000474048 OCIAD2Q56VL3 154 aa6.39□□□□□ -1.39
PRPF38A-202ENST00000474048 ORMDL1Q9P0S3 153 aa6.39□□□□□ -1.39
PRPF38A-202ENST00000474048 RYR2Q92736 4967 aa6.39□□□□□ -1.39
PRPF38A-202ENST00000474048 H0Y9J4 135 aa6.38□□□□□ -1.39
PRPF38A-202ENST00000474048 RPL37AP61513 92 aaKnown RBP6.38□□□□□ -1.39
PRPF38A-202ENST00000474048 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.38□□□□□ -1.39
PRPF38A-202ENST00000474048 KMT2CQ8NEZ4 4911 aaKnown RBP6.37□□□□□ -1.39
PRPF38A-202ENST00000474048 UBE2V1Q13404 147 aa6.37□□□□□ -1.39
PRPF38A-202ENST00000474048 Q6ZQY7 126 aa6.37□□□□□ -1.39
PRPF38A-202ENST00000474048 FAM218AQ96MZ4 157 aa6.37□□□□□ -1.39
PRPF38A-202ENST00000474048 ZNF706Q9Y5V0 76 aaPredicted RBP6.37□□□□□ -1.39
PRPF38A-202ENST00000474048 KRTAP4-16G5E9R7 235 aaPredicted RBP6.36□□□□□ -1.39
PRPF38A-202ENST00000474048 F8W1H4 67 aa6.35□□□□□ -1.39
PRPF38A-202ENST00000474048 FAM229AH3BQW9 127 aa6.35□□□□□ -1.39
PRPF38A-202ENST00000474048 H3BT86 120 aa6.35□□□□□ -1.39
PRPF38A-202ENST00000474048 TMEM256-PLSCR3K7ERE1 68 aa6.35□□□□□ -1.39
PRPF38A-202ENST00000474048 IGLV7-43P04211 117 aa6.35□□□□□ -1.39
PRPF38A-202ENST00000474048 KRTAP11-1Q8IUC1 163 aa6.35□□□□□ -1.39
PRPF38A-202ENST00000474048 DEFB105AQ8NG35 78 aa6.35□□□□□ -1.39
PRPF38A-202ENST00000474048 ZNF861PO60384 105 aa6.34□□□□□ -1.39
PRPF38A-202ENST00000474048 CDK2AP2O75956 126 aa6.34□□□□□ -1.39
PRPF38A-202ENST00000474048 PLA2G1BP04054 148 aaKnown RBP6.34□□□□□ -1.39
PRPF38A-202ENST00000474048 BAALC-AS2P0C853 105 aa6.34□□□□□ -1.39
PRPF38A-202ENST00000474048 MTURNQ8N3F0 131 aa6.34□□□□□ -1.39
PRPF38A-202ENST00000474048 SMCR5Q8TEV8 140 aa6.34□□□□□ -1.39
PRPF38A-202ENST00000474048 Q9BRP9 147 aa6.34□□□□□ -1.39
PRPF38A-202ENST00000474048 F8WEM9 126 aa6.33□□□□□ -1.4
PRPF38A-202ENST00000474048 SMR3BP02814 79 aaPredicted RBP6.33□□□□□ -1.4
PRPF38A-202ENST00000474048 XGP55808 180 aa6.33□□□□□ -1.4
PRPF38A-202ENST00000474048 ANKRD29Q8N6D5 301 aa6.33□□□□□ -1.4
PRPF38A-202ENST00000474048 PPDPFLQ8WWR9 84 aa6.33□□□□□ -1.4
PRPF38A-202ENST00000474048 LAMTOR3Q9UHA4 124 aa6.33□□□□□ -1.4
PRPF38A-202ENST00000474048 TEX49A0A1B0GTD5 131 aa6.31□□□□□ -1.4
PRPF38A-202ENST00000474048 HECTD4Q9Y4D8 3996 aa6.31□□□□□ -1.4
PRPF38A-202ENST00000474048 GAGE2AQ6NT46 116 aa6.3□□□□□ -1.4
PRPF38A-202ENST00000474048 FAT2Q9NYQ8 4349 aa6.3□□□□□ -1.4
PRPF38A-202ENST00000474048 LORP23490 312 aaPredicted RBP6.29□□□□□ -1.4
PRPF38A-202ENST00000474048 KRTAP13-1Q8IUC0 172 aa6.29□□□□□ -1.4
PRPF38A-202ENST00000474048 PKD1P98161 4303 aa6.28□□□□□ -1.4
PRPF38A-202ENST00000474048 JMJD7-PLA2G4BH0Y9G9 81 aa6.28□□□□□ -1.4
PRPF38A-202ENST00000474048 ERC2-IT1O76042 136 aa6.28□□□□□ -1.4
PRPF38A-202ENST00000474048 ST20-AS1Q8NBB2 130 aa6.28□□□□□ -1.4
PRPF38A-202ENST00000474048 IGLV5-48A0A075B6I7 105 aa6.26□□□□□ -1.41
PRPF38A-202ENST00000474048 A0A1B0GV72 72 aa6.26□□□□□ -1.41
PRPF38A-202ENST00000474048 NDUFV3P56181 108 aaKnown RBP6.26□□□□□ -1.41
PRPF38A-202ENST00000474048 SPINK6Q6UWN8 80 aa6.26□□□□□ -1.41
PRPF38A-202ENST00000474048 TEN1Q86WV5 123 aa6.26□□□□□ -1.41
PRPF38A-202ENST00000474048 SPRR4Q96PI1 79 aa6.26□□□□□ -1.41
PRPF38A-202ENST00000474048 DSCR8Q96T75 97 aa6.26□□□□□ -1.41
PRPF38A-202ENST00000474048 DNAH11Q96DT5 4516 aa6.25□□□□□ -1.41
PRPF38A-202ENST00000474048 C9orf153Q5TBE3 101 aa6.25□□□□□ -1.41
PRPF38A-202ENST00000474048 Q5VSD8 79 aa6.25□□□□□ -1.41
PRPF38A-202ENST00000474048 PRO0461Q9UI25 63 aa6.25□□□□□ -1.41
PRPF38A-202ENST00000474048 DNAH5Q8TE73 4624 aa6.25□□□□□ -1.41
PRPF38A-202ENST00000474048 RYR3Q15413 4870 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms