RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 UBE2L6O14933 153 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 TIMM17BO60830 172 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 APOMO95445 188 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 TCL1BO95988 128 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 IGHV3-33P01772 117 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 SMIM13P0DJ93 91 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 MIFP14174 115 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 HTN3P15516 51 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 LGALS3P17931 250 aaKnown RBP0.84□□□□□ -2.27
CCDC39-203ENST00000473854 XCL1P47992 114 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 CMC4P56277 68 aaPredicted RBP0.84□□□□□ -2.27
CCDC39-203ENST00000473854 DAD1P61803 113 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 HERVK_113P63121 156 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 KIAA0087Q14695 138 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 VAMP3Q15836 100 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 MIAQ16674 131 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 KRTAP26-1Q6PEX3 210 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 SFTA2Q6UW10 78 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 SCGB1D4Q6XE38 83 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 C5orf38Q86SI9 138 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 WFDC10BQ8IUB3 73 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 MUSTN1Q8IVN3 82 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 C15orf56Q8N910 161 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 ATP6V0E2Q8NHE4 81 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 LINC00308Q8TCZ7 52 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 HIST1H4GQ99525 98 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 TM2D3Q9BRN9 247 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 VCX2Q9H322 139 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 NDUFA12Q9UI09 145 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 PRO0255Q9UI72 69 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 C22orf24Q9Y442 160 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 CSDC2Q9Y534 153 aaKnown RBP0.84□□□□□ -2.27
CCDC39-203ENST00000473854 SPCS1Q9Y6A9 102 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 FLG2Q5D862 2391 aaPredicted RBP0.84□□□□□ -2.28
CCDC39-203ENST00000473854 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 A6NDN8 102 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 TMEM238C9JI98 176 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 H3BMG7 143 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 H7C2G1 150 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 ATP5G1P05496 136 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 FABP2P12104 132 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 RPL13AP40429 203 aaKnown RBP0.83□□□□□ -2.28
CCDC39-203ENST00000473854 CCL18P55774 89 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 SPAG11BQ08648 103 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 WFDC2Q14508 124 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 ESRGQ1W209 222 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 C9orf116Q5BN46 136 aaPredicted RBP0.83□□□□□ -2.28
CCDC39-203ENST00000473854 MEIG1Q5JSS6 88 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 CASC10Q5T4H9 136 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 LELP1Q5T871 98 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 LYPD5Q6UWN5 251 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 ENHOQ6UWT2 76 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 C2orf82Q6UX34 121 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 LINC00269Q8N2A0 174 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 C6orf223Q8N319 242 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 MIR7-3HGQ8N6C7 128 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 LINC00337Q8N6G1 96 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 C3orf56Q8N813 242 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 COX7B2Q8TF08 81 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 CLEC2BQ92478 149 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 UBE2WQ96B02 151 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 LINC00526Q96FQ7 95 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 GEMIN7Q9H840 131 aaKnown RBP0.83□□□□□ -2.28
CCDC39-203ENST00000473854 TOMM7Q9P0U1 55 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 C6orf48Q9UBA6 75 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 ERG28Q9UKR5 140 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 ICOSQ9Y6W8 199 aa0.83□□□□□ -2.28
CCDC39-203ENST00000473854 DEFB131BA0A096LNP1 70 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 GVQW2A0A096LPI5 108 aaPredicted RBP0.82□□□□□ -2.28
CCDC39-203ENST00000473854 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.82□□□□□ -2.28
CCDC39-203ENST00000473854 TRAV8-4A0A0B4J246 113 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 LOC107984156A0A0G2JMH3 177 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 TRBV30A0A0K0K1B3 111 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 IBA57-AS1B1ANH7 110 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 C9JAW5 83 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 TMEM262E9PQX1 116 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 H3BNG1 76 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 LST1O00453 97 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 COX7A2LO14548 114 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 NCR3O14931 201 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 ANGP03950 147 aaKnown RBP0.82□□□□□ -2.28
CCDC39-203ENST00000473854 IGKV4-1P06312 121 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 SPART-AS1P0CW21 52 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 PSMB2P49721 201 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 REG3AQ06141 175 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 SMAGPQ0VAQ4 97 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 SS18Q15532 418 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 MRPL23Q16540 153 aaKnown RBP0.82□□□□□ -2.28
CCDC39-203ENST00000473854 ETDBQ3ZM63 59 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 OCIAD2Q56VL3 154 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 LINC01556Q5JQF7 62 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 UNQ6190/PRO20217Q6UXQ8 127 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 Q6ZRU5 148 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 GTF2H5Q6ZYL4 71 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 ARL17AQ8IVW1 177 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 Q8IZM0 81 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 ANKRD29Q8N6D5 301 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 NKAPP1Q8N9T2 125 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 CARD19Q96LW7 228 aa0.82□□□□□ -2.28
CCDC39-203ENST00000473854 PRO1854Q9UHT4 67 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms