RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 TYMSOSQ8TAI1 123 aa11.13□□□□□ -0.63
PTCD3-210ENST00000473829 SMCR5Q8TEV8 140 aa11.13□□□□□ -0.63
PTCD3-210ENST00000473829 SPANXCQ9NY87 97 aa11.13□□□□□ -0.63
PTCD3-210ENST00000473829 B5MCH6 92 aa11.12□□□□□ -0.63
PTCD3-210ENST00000473829 SCGB1D4Q6XE38 83 aa11.12□□□□□ -0.63
PTCD3-210ENST00000473829 S100A12P80511 92 aa11.11□□□□□ -0.63
PTCD3-210ENST00000473829 SPRR4Q96PI1 79 aa11.11□□□□□ -0.63
PTCD3-210ENST00000473829 SPANXDQ9BXN6 97 aa11.11□□□□□ -0.63
PTCD3-210ENST00000473829 TRAV23DV6A0A075B6W5 121 aa11.1□□□□□ -0.63
PTCD3-210ENST00000473829 C5orf52A6NGY3 159 aa11.1□□□□□ -0.63
PTCD3-210ENST00000473829 Q9BRP9 147 aa11.08□□□□□ -0.64
PTCD3-210ENST00000473829 ERC2-IT1O76042 136 aa11.07□□□□□ -0.64
PTCD3-210ENST00000473829 Q6ZRX8 168 aa11.07□□□□□ -0.64
PTCD3-210ENST00000473829 C3orf22Q8N5N4 141 aa11.07□□□□□ -0.64
PTCD3-210ENST00000473829 ZNF73O43830 326 aaPredicted RBP11.06□□□□□ -0.64
PTCD3-210ENST00000473829 TSPAN13O95857 204 aa11.05□□□□□ -0.64
PTCD3-210ENST00000473829 OR13C6PQ8NH95 151 aa11.05□□□□□ -0.64
PTCD3-210ENST00000473829 ZNF706Q9Y5V0 76 aaPredicted RBP11.05□□□□□ -0.64
PTCD3-210ENST00000473829 PPDPFQ9H3Y8 114 aa11.04□□□□□ -0.64
PTCD3-210ENST00000473829 LPAP08519 4548 aa11.04□□□□□ -0.64
PTCD3-210ENST00000473829 HSBP1L1C9JCN9 74 aa11.02□□□□□ -0.65
PTCD3-210ENST00000473829 MUSTN1Q8IVN3 82 aa11.02□□□□□ -0.65
PTCD3-210ENST00000473829 SCGB1D1O95968 90 aa11.01□□□□□ -0.65
PTCD3-210ENST00000473829 IFITM1P13164 125 aa11.01□□□□□ -0.65
PTCD3-210ENST00000473829 LINC00483Q53H64 154 aa11.01□□□□□ -0.65
PTCD3-210ENST00000473829 Q6ZVH6 145 aa11.01□□□□□ -0.65
PTCD3-210ENST00000473829 LINC00304Q8N9R0 145 aa11.01□□□□□ -0.65
PTCD3-210ENST00000473829 LINC00518Q8N0U6 118 aa11□□□□□ -0.65
PTCD3-210ENST00000473829 GAGE2AQ6NT46 116 aa10.99□□□□□ -0.65
PTCD3-210ENST00000473829 JOSD1Q15040 202 aaPredicted RBP10.98□□□□□ -0.65
PTCD3-210ENST00000473829 COPS9Q8WXC6 57 aa10.98□□□□□ -0.65
PTCD3-210ENST00000473829 CBY1Q9Y3M2 126 aa10.98□□□□□ -0.65
PTCD3-210ENST00000473829 PRR4Q16378 134 aa10.95□□□□□ -0.66
PTCD3-210ENST00000473829 C6orf99Q4VX62 202 aa10.95□□□□□ -0.66
PTCD3-210ENST00000473829 ST20-AS1Q8NBB2 130 aa10.95□□□□□ -0.66
PTCD3-210ENST00000473829 HINT1P49773 126 aaPredicted RBP10.94□□□□□ -0.66
PTCD3-210ENST00000473829 ELOF1P60002 83 aaKnown RBP10.93□□□□□ -0.66
PTCD3-210ENST00000473829 A6NDN8 102 aa10.92□□□□□ -0.66
PTCD3-210ENST00000473829 COX8AP10176 69 aa10.91□□□□□ -0.66
PTCD3-210ENST00000473829 COX7BP24311 80 aa10.91□□□□□ -0.66
PTCD3-210ENST00000473829 Q8NBF4 154 aa10.91□□□□□ -0.66
PTCD3-210ENST00000473829 RETNLBQ9BQ08 111 aa10.91□□□□□ -0.66
PTCD3-210ENST00000473829 IGLV9-49A0A0B4J1Y8 123 aa10.9□□□□□ -0.66
PTCD3-210ENST00000473829 MOBPQ13875 183 aa10.89□□□□□ -0.67
PTCD3-210ENST00000473829 DHRS4-AS1Q9P1J3 65 aa10.88□□□□□ -0.67
PTCD3-210ENST00000473829 PAM16Q9Y3D7 125 aa10.88□□□□□ -0.67
PTCD3-210ENST00000473829 RNF213Q63HN8 5207 aa10.88□□□□□ -0.67
PTCD3-210ENST00000473829 A4D1N5 150 aa10.87□□□□□ -0.67
PTCD3-210ENST00000473829 TRAV13-2A0A0B4J235 113 aa10.86□□□□□ -0.67
PTCD3-210ENST00000473829 SPATA45Q537H7 98 aa10.86□□□□□ -0.67
PTCD3-210ENST00000473829 SMIM11BQ8TCY0 68 aa10.86□□□□□ -0.67
PTCD3-210ENST00000473829 TRBV7-6A0A0J9YX20 115 aa10.85□□□□□ -0.67
PTCD3-210ENST00000473829 DLEU1O43261 78 aa10.85□□□□□ -0.67
PTCD3-210ENST00000473829 CTAG1AP78358 180 aa10.85□□□□□ -0.67
PTCD3-210ENST00000473829 SPAG11AQ6PDA7 123 aa10.85□□□□□ -0.67
PTCD3-210ENST00000473829 C14orf144Q96I85 54 aa10.85□□□□□ -0.67
PTCD3-210ENST00000473829 A0A1B0GWB2 263 aa10.84□□□□□ -0.67
PTCD3-210ENST00000473829 SPRR1BP22528 89 aa10.84□□□□□ -0.67
PTCD3-210ENST00000473829 HIST1H4GQ99525 98 aa10.83□□□□□ -0.68
PTCD3-210ENST00000473829 VAMP8Q9BV40 100 aa10.83□□□□□ -0.68
PTCD3-210ENST00000473829 SSBP3-AS1Q7Z2R9 100 aa10.82□□□□□ -0.68
PTCD3-210ENST00000473829 TMA7Q9Y2S6 64 aaKnown RBP10.82□□□□□ -0.68
PTCD3-210ENST00000473829 C4orf48Q5BLP8 95 aa10.81□□□□□ -0.68
PTCD3-210ENST00000473829 C9orf153Q5TBE3 101 aa10.81□□□□□ -0.68
PTCD3-210ENST00000473829 C12orf57Q99622 126 aa10.81□□□□□ -0.68
PTCD3-210ENST00000473829 C2orf91Q6ZV80 131 aa10.79□□□□□ -0.68
PTCD3-210ENST00000473829 LCE2BO14633 110 aa10.78□□□□□ -0.68
PTCD3-210ENST00000473829 PYY3Q5JQD4 70 aa10.78□□□□□ -0.68
PTCD3-210ENST00000473829 SPINK1P00995 79 aa10.77□□□□□ -0.69
PTCD3-210ENST00000473829 LINC01547P58512 204 aaPredicted RBP10.77□□□□□ -0.69
PTCD3-210ENST00000473829 SLC25A34Q6PIV7 304 aa10.77□□□□□ -0.69
PTCD3-210ENST00000473829 DEFB105AQ8NG35 78 aa10.77□□□□□ -0.69
PTCD3-210ENST00000473829 HIGD1BQ9P298 99 aa10.76□□□□□ -0.69
PTCD3-210ENST00000473829 TAL2Q16559 108 aa10.75□□□□□ -0.69
PTCD3-210ENST00000473829 IGLV5-48A0A075B6I7 105 aa10.74□□□□□ -0.69
PTCD3-210ENST00000473829 IGLV7-46A0A075B6I9 117 aa10.74□□□□□ -0.69
PTCD3-210ENST00000473829 Q1RN00 199 aa10.74□□□□□ -0.69
PTCD3-210ENST00000473829 TEX49A0A1B0GTD5 131 aa10.73□□□□□ -0.69
PTCD3-210ENST00000473829 SMIM29Q86T20 159 aa10.73□□□□□ -0.69
PTCD3-210ENST00000473829 LAMTOR3Q9UHA4 124 aa10.73□□□□□ -0.69
PTCD3-210ENST00000473829 RPS29P62273 56 aaKnown RBP10.72□□□□□ -0.69
PTCD3-210ENST00000473829 CFC1BP0CG36 223 aa10.71□□□□□ -0.69
PTCD3-210ENST00000473829 CFC1P0CG37 223 aa10.71□□□□□ -0.69
PTCD3-210ENST00000473829 LINC00575Q6W349 94 aa10.71□□□□□ -0.69
PTCD3-210ENST00000473829 Q8N377 158 aa10.71□□□□□ -0.69
PTCD3-210ENST00000473829 TPRXLQ17RH7 258 aa10.7□□□□□ -0.7
PTCD3-210ENST00000473829 NHP2Q9NX24 153 aaKnown RBP10.7□□□□□ -0.7
PTCD3-210ENST00000473829 VAMP3Q15836 100 aa10.69□□□□□ -0.7
PTCD3-210ENST00000473829 FP248Q71RG6 208 aaPredicted RBP10.68□□□□□ -0.7
PTCD3-210ENST00000473829 H7C2G1 150 aa10.67□□□□□ -0.7
PTCD3-210ENST00000473829 A0A0B4J2C4 111 aa10.66□□□□□ -0.7
PTCD3-210ENST00000473829 SLC25A20O43772 301 aa10.66□□□□□ -0.7
PTCD3-210ENST00000473829 HRCT1Q6UXD1 115 aa10.66□□□□□ -0.7
PTCD3-210ENST00000473829 CEND1Q8N111 149 aa10.66□□□□□ -0.7
PTCD3-210ENST00000473829 hADV29S1A0JD25 119 aa10.65□□□□□ -0.7
PTCD3-210ENST00000473829 SMCPP49901 116 aaPredicted RBP10.65□□□□□ -0.7
PTCD3-210ENST00000473829 RAB37Q96AX2 223 aa10.65□□□□□ -0.7
PTCD3-210ENST00000473829 Q6ZQY7 126 aa10.64□□□□□ -0.71
PTCD3-210ENST00000473829 A0A0G2JQZ4 141 aa10.63□□□□□ -0.71
PTCD3-210ENST00000473829 FXYD2P54710 66 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms