RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 SNRPGP15A8MWD9 76 aa0.42□□□□□ -2.34
GINS1-202ENST00000473460 NDUFB1O75438 58 aa0.42□□□□□ -2.34
GINS1-202ENST00000473460 RPL37P61927 97 aaKnown RBP0.42□□□□□ -2.34
GINS1-202ENST00000473460 FAM103A1Q9BTL3 118 aaKnown RBP0.42□□□□□ -2.34
GINS1-202ENST00000473460 ASCC3Q8N3C0 2202 aaKnown RBP0.42□□□□□ -2.34
GINS1-202ENST00000473460 CLTCL1P53675 1640 aa0.42□□□□□ -2.34
GINS1-202ENST00000473460 NBPF19A0A087WUL8 3843 aa0.41□□□□□ -2.34
GINS1-202ENST00000473460 A0A1B0GU69 56 aa0.41□□□□□ -2.34
GINS1-202ENST00000473460 DEFB112Q30KQ8 113 aa0.41□□□□□ -2.34
GINS1-202ENST00000473460 NCBP2-AS2Q69YL0 99 aa0.41□□□□□ -2.34
GINS1-202ENST00000473460 Q6ZRX8 168 aa0.41□□□□□ -2.34
GINS1-202ENST00000473460 WFDC9Q8NEX5 89 aa0.41□□□□□ -2.34
GINS1-202ENST00000473460 ANKRD17O75179 2603 aaKnown RBP0.41□□□□□ -2.34
GINS1-202ENST00000473460 VPS13BQ7Z7G8 4022 aa0.41□□□□□ -2.34
GINS1-202ENST00000473460 CSMD3Q7Z407 3707 aa0.4□□□□□ -2.35
GINS1-202ENST00000473460 K7EMI3 77 aa0.4□□□□□ -2.35
GINS1-202ENST00000473460 NDUFA4O00483 81 aa0.4□□□□□ -2.35
GINS1-202ENST00000473460 COX7BP24311 80 aa0.4□□□□□ -2.35
GINS1-202ENST00000473460 HAMPP81172 84 aa0.4□□□□□ -2.35
GINS1-202ENST00000473460 DEFB114Q30KQ6 69 aa0.4□□□□□ -2.35
GINS1-202ENST00000473460 ENHOQ6UWT2 76 aa0.4□□□□□ -2.35
GINS1-202ENST00000473460 GAFA1Q96PS6 74 aa0.4□□□□□ -2.35
GINS1-202ENST00000473460 KCNQ1DNQ9H478 68 aa0.4□□□□□ -2.35
GINS1-202ENST00000473460 PIEZO2Q9H5I5 2752 aa0.4□□□□□ -2.35
GINS1-202ENST00000473460 BSNQ9UPA5 3926 aa0.4□□□□□ -2.35
GINS1-202ENST00000473460 A0A0C4DFX4 3053 aa0.39□□□□□ -2.35
GINS1-202ENST00000473460 I3L2K1 104 aa0.39□□□□□ -2.35
GINS1-202ENST00000473460 PIN1P1O15428 100 aa0.39□□□□□ -2.35
GINS1-202ENST00000473460 SSBP3-AS1Q7Z2R9 100 aa0.39□□□□□ -2.35
GINS1-202ENST00000473460 UBL5Q9BZL1 73 aa0.39□□□□□ -2.35
GINS1-202ENST00000473460 CMC2Q9NRP2 79 aa0.39□□□□□ -2.35
GINS1-202ENST00000473460 REV3LO60673 3130 aa0.39□□□□□ -2.35
GINS1-202ENST00000473460 ASH1LQ9NR48 2969 aaKnown RBP0.39□□□□□ -2.35
GINS1-202ENST00000473460 LYSTQ99698 3801 aa0.38□□□□□ -2.35
GINS1-202ENST00000473460 ZDBF2Q9HCK1 2354 aa0.38□□□□□ -2.35
GINS1-202ENST00000473460 URB1O60287 2271 aaKnown RBP0.38□□□□□ -2.35
GINS1-202ENST00000473460 IGIPA6NJ69 53 aa0.38□□□□□ -2.35
GINS1-202ENST00000473460 CPSF4LA6NMK7 179 aaKnown RBP0.38□□□□□ -2.35
GINS1-202ENST00000473460 M0R1W7 72 aa0.38□□□□□ -2.35
GINS1-202ENST00000473460 COX6B1P14854 86 aa0.38□□□□□ -2.35
GINS1-202ENST00000473460 NMES1Q9C002 83 aa0.38□□□□□ -2.35
GINS1-202ENST00000473460 PRKDCP78527 4128 aaKnown RBP0.38□□□□□ -2.35
GINS1-202ENST00000473460 SPTY2D1-AS1A0A0U1RR47 76 aa0.37□□□□□ -2.35
GINS1-202ENST00000473460 LINC01546A6NGU7 62 aa0.37□□□□□ -2.35
GINS1-202ENST00000473460 K7EQZ3 153 aa0.37□□□□□ -2.35
GINS1-202ENST00000473460 FCER1GP30273 86 aa0.37□□□□□ -2.35
GINS1-202ENST00000473460 RPL38P63173 70 aaKnown RBP0.37□□□□□ -2.35
GINS1-202ENST00000473460 UBE2DNLQ8IWF7 75 aa0.37□□□□□ -2.35
GINS1-202ENST00000473460 TOMM5Q8N4H5 51 aa0.37□□□□□ -2.35
GINS1-202ENST00000473460 DEFB123Q8N688 67 aa0.37□□□□□ -2.35
GINS1-202ENST00000473460 TNCP24821 2201 aa0.37□□□□□ -2.35
GINS1-202ENST00000473460 ASXL3Q9C0F0 2248 aa0.37□□□□□ -2.35
GINS1-202ENST00000473460 KMT2AQ03164 3969 aa0.37□□□□□ -2.35
GINS1-202ENST00000473460 ZFHX4Q86UP3 3567 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 DNAH11Q96DT5 4516 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 FAM208BQ5VWN6 2430 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 FAT2Q9NYQ8 4349 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 PKHD1L1Q86WI1 4243 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 KNTC1P50748 2209 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 DEFB131BA0A096LNP1 70 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 ETDCA0A1B0GVM5 59 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 SMIM27A0A1W2PRY6 76 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 I3L3M4 83 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 PRH1P02810 166 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 PLNP26678 52 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 TP53AIP1Q9HCN2 124 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 ABRACLQ9P1F3 81 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 NAV3Q8IVL0 2385 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 JMJD1CQ15652 2540 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 MYCBP2O75592 4640 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 HECTD4Q9Y4D8 3996 aa0.36□□□□□ -2.35
GINS1-202ENST00000473460 CNOT1A5YKK6 2376 aaKnown RBP0.35□□□□□ -2.35
GINS1-202ENST00000473460 MEGF8Q7Z7M0 2845 aa0.35□□□□□ -2.35
GINS1-202ENST00000473460 LOC730098B7Z3J9 87 aa0.35□□□□□ -2.35
GINS1-202ENST00000473460 H0YAA0 97 aa0.35□□□□□ -2.35
GINS1-202ENST00000473460 SERF2P84101 59 aa0.35□□□□□ -2.35
GINS1-202ENST00000473460 COX6A2Q02221 97 aa0.35□□□□□ -2.35
GINS1-202ENST00000473460 MRPL34Q9BQ48 92 aaKnown RBP0.35□□□□□ -2.35
GINS1-202ENST00000473460 CNFNQ9BYD5 112 aa0.35□□□□□ -2.35
GINS1-202ENST00000473460 PRO3102Q9H379 93 aa0.35□□□□□ -2.35
GINS1-202ENST00000473460 CRIPTQ9P021 101 aa0.35□□□□□ -2.35
GINS1-202ENST00000473460 DNAH3Q8TD57 4116 aa0.35□□□□□ -2.35
GINS1-202ENST00000473460 RELNP78509 3460 aa0.35□□□□□ -2.35
GINS1-202ENST00000473460 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.35□□□□□ -2.352e-7■■■■□ 21.5
GINS1-202ENST00000473460 AKAP9Q99996 3911 aa0.34□□□□□ -2.35
GINS1-202ENST00000473460 ZNF462Q96JM2 2506 aa0.34□□□□□ -2.35
GINS1-202ENST00000473460 TRRAPQ9Y4A5 3859 aa0.34□□□□□ -2.35
GINS1-202ENST00000473460 DNAH7Q8WXX0 4024 aa0.34□□□□□ -2.35
GINS1-202ENST00000473460 LYNX1G3V0Z9 82 aa0.34□□□□□ -2.36
GINS1-202ENST00000473460 MRPL33O75394 65 aaKnown RBP0.34□□□□□ -2.36
GINS1-202ENST00000473460 CRIP1P50238 77 aa0.34□□□□□ -2.36
GINS1-202ENST00000473460 CACNA1EQ15878 2313 aa0.34□□□□□ -2.36
GINS1-202ENST00000473460 PIGYQ3MUY2 71 aa0.34□□□□□ -2.36
GINS1-202ENST00000473460 LELP1Q5T871 98 aa0.34□□□□□ -2.36
GINS1-202ENST00000473460 SPINK6Q6UWN8 80 aa0.34□□□□□ -2.36
GINS1-202ENST00000473460 COX6B2Q6YFQ2 88 aa0.34□□□□□ -2.36
GINS1-202ENST00000473460 SMR3AQ99954 134 aa0.34□□□□□ -2.36
GINS1-202ENST00000473460 FRAS1Q86XX4 4008 aa0.34□□□□□ -2.36
GINS1-202ENST00000473460 SACSQ9NZJ4 4579 aa0.33□□□□□ -2.36
GINS1-202ENST00000473460 CHD9Q3L8U1 2897 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 233.1 ms