RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 OR13C6PQ8NH95 151 aa11.51□□□□□ -0.57
CTDSP1-207ENST00000473420 KRTAP29-1A8MX34 341 aaPredicted RBP11.5□□□□□ -0.57
CTDSP1-207ENST00000473420 KRTAP4-16G5E9R7 235 aaPredicted RBP11.5□□□□□ -0.57
CTDSP1-207ENST00000473420 MYCBP2O75592 4640 aa11.49□□□□□ -0.57
CTDSP1-207ENST00000473420 ETDCA0A1B0GVM5 59 aa11.49□□□□□ -0.57
CTDSP1-207ENST00000473420 PRLHP81277 87 aa11.49□□□□□ -0.57
CTDSP1-207ENST00000473420 LOC105371267A0A1B0GV96 52 aa11.48□□□□□ -0.57
CTDSP1-207ENST00000473420 TAL2Q16559 108 aa11.48□□□□□ -0.57
CTDSP1-207ENST00000473420 TRAV13-2A0A0B4J235 113 aa11.47□□□□□ -0.57
CTDSP1-207ENST00000473420 A4D1N5 150 aa11.47□□□□□ -0.57
CTDSP1-207ENST00000473420 ZNF73O43830 326 aaPredicted RBP11.47□□□□□ -0.57
CTDSP1-207ENST00000473420 UQCR10Q9UDW1 63 aa11.46□□□□□ -0.57
CTDSP1-207ENST00000473420 B5MCH6 92 aa11.45□□□□□ -0.58
CTDSP1-207ENST00000473420 A6NDN8 102 aa11.44□□□□□ -0.58
CTDSP1-207ENST00000473420 LINC01600Q96MT4 127 aa11.44□□□□□ -0.58
CTDSP1-207ENST00000473420 HINT1P49773 126 aaPredicted RBP11.42□□□□□ -0.58
CTDSP1-207ENST00000473420 Q6ZRX8 168 aa11.42□□□□□ -0.58
CTDSP1-207ENST00000473420 FAT3Q8TDW7 4589 aa11.42□□□□□ -0.58
CTDSP1-207ENST00000473420 LRP1Q07954 4544 aaKnown RBP11.41□□□□□ -0.58
CTDSP1-207ENST00000473420 KRTAP1-4P0C5Y4 121 aa11.41□□□□□ -0.58
CTDSP1-207ENST00000473420 CEND1Q8N111 149 aa11.41□□□□□ -0.58
CTDSP1-207ENST00000473420 HIGD2AQ9BW72 106 aa11.41□□□□□ -0.58
CTDSP1-207ENST00000473420 HSD52Q0P140 79 aa11.39□□□□□ -0.59
CTDSP1-207ENST00000473420 TRBV7-6A0A0J9YX20 115 aa11.38□□□□□ -0.59
CTDSP1-207ENST00000473420 J3QL48 77 aa11.38□□□□□ -0.59
CTDSP1-207ENST00000473420 C6orf99Q4VX62 202 aa11.38□□□□□ -0.59
CTDSP1-207ENST00000473420 SMCR5Q8TEV8 140 aa11.38□□□□□ -0.59
CTDSP1-207ENST00000473420 TMEM238LA0A1B0GVL6 79 aa11.37□□□□□ -0.59
CTDSP1-207ENST00000473420 A6NJY4 79 aa11.37□□□□□ -0.59
CTDSP1-207ENST00000473420 C12orf57Q99622 126 aa11.37□□□□□ -0.59
CTDSP1-207ENST00000473420 A0A0B4J2C4 111 aa11.36□□□□□ -0.59
CTDSP1-207ENST00000473420 ELOF1P60002 83 aaKnown RBP11.36□□□□□ -0.59
CTDSP1-207ENST00000473420 Q9BRP9 147 aa11.36□□□□□ -0.59
CTDSP1-207ENST00000473420 CFC1BP0CG36 223 aa11.35□□□□□ -0.59
CTDSP1-207ENST00000473420 CFC1P0CG37 223 aa11.35□□□□□ -0.59
CTDSP1-207ENST00000473420 MT1HL1P0DM35 61 aa11.35□□□□□ -0.59
CTDSP1-207ENST00000473420 COX7BP24311 80 aa11.35□□□□□ -0.59
CTDSP1-207ENST00000473420 SMIM11BQ8TCY0 68 aa11.35□□□□□ -0.59
CTDSP1-207ENST00000473420 PRO1933Q9H354 126 aa11.35□□□□□ -0.59
CTDSP1-207ENST00000473420 ZNF706Q9Y5V0 76 aaPredicted RBP11.35□□□□□ -0.59
CTDSP1-207ENST00000473420 RPL13AP40429 203 aaKnown RBP11.34□□□□□ -0.59
CTDSP1-207ENST00000473420 DMBT1Q9UGM3 2413 aaPredicted RBP11.33□□□□□ -0.6
CTDSP1-207ENST00000473420 A0A1B0GWB2 263 aa11.33□□□□□ -0.6
CTDSP1-207ENST00000473420 FXYD2P54710 66 aa11.33□□□□□ -0.6
CTDSP1-207ENST00000473420 KRTAP10-8P60410 259 aa11.33□□□□□ -0.6
CTDSP1-207ENST00000473420 RAB37Q96AX2 223 aa11.33□□□□□ -0.6
CTDSP1-207ENST00000473420 DHRS4-AS1Q9P1J3 65 aa11.33□□□□□ -0.6
CTDSP1-207ENST00000473420 FAM229BQ4G0N7 80 aa11.32□□□□□ -0.6
CTDSP1-207ENST00000473420 SPRR4Q96PI1 79 aa11.32□□□□□ -0.6
CTDSP1-207ENST00000473420 ERC2-IT1O76042 136 aa11.3□□□□□ -0.6
CTDSP1-207ENST00000473420 PRR26Q8N8Z3 221 aa11.3□□□□□ -0.6
CTDSP1-207ENST00000473420 TSTD3H0UI37 97 aa11.28□□□□□ -0.6
CTDSP1-207ENST00000473420 CRYGAP11844 174 aa11.28□□□□□ -0.6
CTDSP1-207ENST00000473420 VAMP3Q15836 100 aa11.28□□□□□ -0.6
CTDSP1-207ENST00000473420 PRO1854Q9UHT4 67 aa11.27□□□□□ -0.61
CTDSP1-207ENST00000473420 A0A087X002 238 aa11.26□□□□□ -0.61
CTDSP1-207ENST00000473420 ANAPC11Q9NYG5 84 aa11.26□□□□□ -0.61
CTDSP1-207ENST00000473420 LINC00483Q53H64 154 aa11.25□□□□□ -0.61
CTDSP1-207ENST00000473420 BVES-AS1Q5T3Y7 98 aa11.25□□□□□ -0.61
CTDSP1-207ENST00000473420 NHP2Q9NX24 153 aaKnown RBP11.25□□□□□ -0.61
CTDSP1-207ENST00000473420 H7C2G1 150 aa11.23□□□□□ -0.61
CTDSP1-207ENST00000473420 TNXBP22105 4242 aa11.22□□□□□ -0.61
CTDSP1-207ENST00000473420 GAGE2AQ6NT46 116 aa11.22□□□□□ -0.61
CTDSP1-207ENST00000473420 CTAG1AP78358 180 aa11.21□□□□□ -0.61
CTDSP1-207ENST00000473420 Q1RN00 199 aa11.21□□□□□ -0.61
CTDSP1-207ENST00000473420 KRTAP13-2Q52LG2 175 aa11.21□□□□□ -0.61
CTDSP1-207ENST00000473420 M0R143 59 aa11.2□□□□□ -0.62
CTDSP1-207ENST00000473420 SLC25A20O43772 301 aa11.2□□□□□ -0.62
CTDSP1-207ENST00000473420 ST20-AS1Q8NBB2 130 aa11.2□□□□□ -0.62
CTDSP1-207ENST00000473420 TYMSOSQ8TAI1 123 aa11.2□□□□□ -0.62
CTDSP1-207ENST00000473420 LINC00575Q6W349 94 aa11.19□□□□□ -0.62
CTDSP1-207ENST00000473420 SPRR1BP22528 89 aa11.18□□□□□ -0.62
CTDSP1-207ENST00000473420 H0YGX0 51 aa11.17□□□□□ -0.62
CTDSP1-207ENST00000473420 K7ERJ3 54 aa11.17□□□□□ -0.62
CTDSP1-207ENST00000473420 hADV29S1A0JD25 119 aa11.16□□□□□ -0.62
CTDSP1-207ENST00000473420 C3orf22Q8N5N4 141 aa11.15□□□□□ -0.62
CTDSP1-207ENST00000473420 IGLV5-48A0A075B6I7 105 aa11.14□□□□□ -0.63
CTDSP1-207ENST00000473420 TEX49A0A1B0GTD5 131 aa11.13□□□□□ -0.63
CTDSP1-207ENST00000473420 TRIAP1O43715 76 aa11.12□□□□□ -0.63
CTDSP1-207ENST00000473420 TSPAN13O95857 204 aa11.12□□□□□ -0.63
CTDSP1-207ENST00000473420 LINC01547P58512 204 aaPredicted RBP11.12□□□□□ -0.63
CTDSP1-207ENST00000473420 HERC1Q15751 4861 aa11.11□□□□□ -0.63
CTDSP1-207ENST00000473420 SNCGO76070 127 aa11.1□□□□□ -0.63
CTDSP1-207ENST00000473420 DEFB105AQ8NG35 78 aa11.1□□□□□ -0.63
CTDSP1-207ENST00000473420 IGLV9-49A0A0B4J1Y8 123 aa11.09□□□□□ -0.63
CTDSP1-207ENST00000473420 A0A1B0GX51 115 aa11.09□□□□□ -0.63
CTDSP1-207ENST00000473420 PSMB2P49721 201 aa11.09□□□□□ -0.63
CTDSP1-207ENST00000473420 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.09□□□□□ -0.63
CTDSP1-207ENST00000473420 Q6ZQY7 126 aa11.09□□□□□ -0.63
CTDSP1-207ENST00000473420 LAMTOR3Q9UHA4 124 aa11.09□□□□□ -0.63
CTDSP1-207ENST00000473420 COX6CP09669 75 aa11.08□□□□□ -0.64
CTDSP1-207ENST00000473420 SSBP3-AS1Q7Z2R9 100 aa11.08□□□□□ -0.64
CTDSP1-207ENST00000473420 LINC00304Q8N9R0 145 aa11.08□□□□□ -0.64
CTDSP1-207ENST00000473420 MOBPQ13875 183 aa11.07□□□□□ -0.64
CTDSP1-207ENST00000473420 FAM218AQ96MZ4 157 aa11.07□□□□□ -0.64
CTDSP1-207ENST00000473420 Q8N377 158 aa11.06□□□□□ -0.64
CTDSP1-207ENST00000473420 Q8NBF4 154 aa11.06□□□□□ -0.64
CTDSP1-207ENST00000473420 C9orf153Q5TBE3 101 aa11.05□□□□□ -0.64
CTDSP1-207ENST00000473420 PPDPFLQ8WWR9 84 aa11.05□□□□□ -0.64
CTDSP1-207ENST00000473420 OCIAD2Q56VL3 154 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms