RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 DSCR8Q96T75 97 aa5.02□□□□□ -1.61
CCDC171-205ENST00000472806 ATRQ13535 2644 aa5.02□□□□□ -1.61
CCDC171-205ENST00000472806 USP17L23D6RBM5 183 aa5.01□□□□□ -1.61
CCDC171-205ENST00000472806 Q6ZQY7 126 aa5.01□□□□□ -1.61
CCDC171-205ENST00000472806 Q6ZRP5 223 aa5.01□□□□□ -1.61
CCDC171-205ENST00000472806 SMCR5Q8TEV8 140 aa5.01□□□□□ -1.61
CCDC171-205ENST00000472806 UBL5Q9BZL1 73 aa5.01□□□□□ -1.61
CCDC171-205ENST00000472806 PKIGQ9Y2B9 76 aa5.01□□□□□ -1.61
CCDC171-205ENST00000472806 IGLV5-37A0A075B6J1 123 aa5□□□□□ -1.61
CCDC171-205ENST00000472806 LOC107984640A0A0U1RRK4 108 aa5□□□□□ -1.61
CCDC171-205ENST00000472806 PRB2P02812 416 aaPredicted RBP5□□□□□ -1.61
CCDC171-205ENST00000472806 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
CCDC171-205ENST00000472806 PRYO14603 147 aa4.99□□□□□ -1.61
CCDC171-205ENST00000472806 C14orf177Q52M58 125 aa4.99□□□□□ -1.61
CCDC171-205ENST00000472806 C9orf129Q5T035 196 aaKnown RBP4.99□□□□□ -1.61
CCDC171-205ENST00000472806 UBE2DNLQ8IWF7 75 aa4.99□□□□□ -1.61
CCDC171-205ENST00000472806 B9D2Q9BPU9 175 aa4.99□□□□□ -1.61
CCDC171-205ENST00000472806 KCNQ1DNQ9H478 68 aa4.99□□□□□ -1.61
CCDC171-205ENST00000472806 LINC00846Q9NV44 126 aa4.99□□□□□ -1.61
CCDC171-205ENST00000472806 FAM236AA0A1B0GUQ0 79 aa4.98□□□□□ -1.61
CCDC171-205ENST00000472806 FAM236BA0A1B0GV22 79 aa4.98□□□□□ -1.61
CCDC171-205ENST00000472806 ATOX1O00244 68 aa4.98□□□□□ -1.61
CCDC171-205ENST00000472806 NHLRC4P0CG21 123 aaPredicted RBP4.98□□□□□ -1.61
CCDC171-205ENST00000472806 Q6ZQT0 140 aa4.98□□□□□ -1.61
CCDC171-205ENST00000472806 DHRS4-AS1Q9P1J3 65 aa4.98□□□□□ -1.61
CCDC171-205ENST00000472806 C7orf33Q8WU49 177 aa4.97□□□□□ -1.61
CCDC171-205ENST00000472806 NIPBLQ6KC79 2804 aaeCLIP4.96□□□□□ -1.61
CCDC171-205ENST00000472806 NUPR2A6NF83 97 aa4.96□□□□□ -1.62
CCDC171-205ENST00000472806 PSCAO43653 123 aa4.96□□□□□ -1.62
CCDC171-205ENST00000472806 TENM1Q9UKZ4 2725 aa4.96□□□□□ -1.62
CCDC171-205ENST00000472806 VWFP04275 2813 aa4.95□□□□□ -1.62
CCDC171-205ENST00000472806 ETDCA0A1B0GVM5 59 aa4.95□□□□□ -1.62
CCDC171-205ENST00000472806 NBEAL2Q6ZNJ1 2754 aa4.94□□□□□ -1.62
CCDC171-205ENST00000472806 IGLV1-50A0A075B6I6 118 aa4.94□□□□□ -1.62
CCDC171-205ENST00000472806 IGKV3D-7A0A0C4DH55 119 aa4.94□□□□□ -1.62
CCDC171-205ENST00000472806 TRBV7-4A0A0J9YYF1 115 aa4.94□□□□□ -1.62
CCDC171-205ENST00000472806 CNBPP62633 177 aaKnown RBP4.94□□□□□ -1.62
CCDC171-205ENST00000472806 SERTAD4-AS1Q5TG53 156 aa4.94□□□□□ -1.62
CCDC171-205ENST00000472806 APLNQ9ULZ1 77 aa4.94□□□□□ -1.62
CCDC171-205ENST00000472806 A0A1B0GW54 56 aa4.93□□□□□ -1.62
CCDC171-205ENST00000472806 UQCRQO14949 82 aa4.93□□□□□ -1.62
CCDC171-205ENST00000472806 SPRR1AP35321 89 aa4.93□□□□□ -1.62
CCDC171-205ENST00000472806 HIST1H4AP62805 103 aaKnown RBP4.93□□□□□ -1.62
CCDC171-205ENST00000472806 Q6ZRX8 168 aa4.93□□□□□ -1.62
CCDC171-205ENST00000472806 MRPL55Q7Z7F7 128 aaKnown RBP4.93□□□□□ -1.62
CCDC171-205ENST00000472806 C16orf90A8MZG2 172 aa4.92□□□□□ -1.62
CCDC171-205ENST00000472806 B5MCH6 92 aa4.92□□□□□ -1.62
CCDC171-205ENST00000472806 BCE1O60756 84 aa4.92□□□□□ -1.62
CCDC171-205ENST00000472806 CXCL6P80162 114 aa4.92□□□□□ -1.62
CCDC171-205ENST00000472806 CASC10Q5T4H9 136 aa4.92□□□□□ -1.62
CCDC171-205ENST00000472806 REG3GQ6UW15 175 aa4.91□□□□□ -1.62
CCDC171-205ENST00000472806 FAM19A5Q7Z5A7 132 aaPredicted RBP4.91□□□□□ -1.62
CCDC171-205ENST00000472806 C3orf22Q8N5N4 141 aa4.91□□□□□ -1.62
CCDC171-205ENST00000472806 CCDC179H3BU77 68 aa4.9□□□□□ -1.63
CCDC171-205ENST00000472806 COX7CP15954 63 aa4.9□□□□□ -1.63
CCDC171-205ENST00000472806 Q6ZVQ6 151 aa4.9□□□□□ -1.63
CCDC171-205ENST00000472806 SMIM20Q8N5G0 67 aa4.9□□□□□ -1.63
CCDC171-205ENST00000472806 LINC00474Q9P2X8 69 aa4.9□□□□□ -1.63
CCDC171-205ENST00000472806 TRRAPQ9Y4A5 3859 aa4.9□□□□□ -1.63
CCDC171-205ENST00000472806 IGLV5-48A0A075B6I7 105 aa4.89□□□□□ -1.63
CCDC171-205ENST00000472806 RPL37AP8A6NKH3 93 aa4.89□□□□□ -1.63
CCDC171-205ENST00000472806 KRTAP4-16G5E9R7 235 aaPredicted RBP4.89□□□□□ -1.63
CCDC171-205ENST00000472806 FUSP35637 526 aaKnown RBP eCLIP4.89□□□□□ -1.63
CCDC171-205ENST00000472806 LINC01547P58512 204 aaPredicted RBP4.89□□□□□ -1.63
CCDC171-205ENST00000472806 UBE2BP63146 152 aa4.89□□□□□ -1.63
CCDC171-205ENST00000472806 HAMPP81172 84 aa4.89□□□□□ -1.63
CCDC171-205ENST00000472806 C9orf153Q5TBE3 101 aa4.89□□□□□ -1.63
CCDC171-205ENST00000472806 SERP2Q8N6R1 65 aa4.89□□□□□ -1.63
CCDC171-205ENST00000472806 DNAH3Q8TD57 4116 aa4.89□□□□□ -1.63
CCDC171-205ENST00000472806 NBDYA0A0U1RRE5 68 aa4.88□□□□□ -1.63
CCDC171-205ENST00000472806 FAM168BA1KXE4 195 aa4.88□□□□□ -1.63
CCDC171-205ENST00000472806 Q8N377 158 aa4.88□□□□□ -1.63
CCDC171-205ENST00000472806 DEFB105AQ8NG35 78 aa4.88□□□□□ -1.63
CCDC171-205ENST00000472806 F8WEM9 126 aa4.87□□□□□ -1.63
CCDC171-205ENST00000472806 A0A087WVE0 104 aa4.86□□□□□ -1.63
CCDC171-205ENST00000472806 A0A096LNI7 61 aa4.86□□□□□ -1.63
CCDC171-205ENST00000472806 CRYGAP11844 174 aa4.86□□□□□ -1.63
CCDC171-205ENST00000472806 NREPQ16612 68 aa4.86□□□□□ -1.63
CCDC171-205ENST00000472806 Q9BRP9 147 aa4.86□□□□□ -1.63
CCDC171-205ENST00000472806 KRTAP1-5Q9BYS1 174 aa4.86□□□□□ -1.63
CCDC171-205ENST00000472806 CMYA5Q8N3K9 4069 aa4.85□□□□□ -1.63
CCDC171-205ENST00000472806 IGKV2-24A0A0C4DH68 120 aa4.85□□□□□ -1.63
CCDC171-205ENST00000472806 FAM19A1Q7Z5A9 133 aa4.85□□□□□ -1.63
CCDC171-205ENST00000472806 KRTAP7-1Q8IUC3 87 aa4.85□□□□□ -1.63
CCDC171-205ENST00000472806 C9orf163Q8N9P6 203 aa4.85□□□□□ -1.63
CCDC171-205ENST00000472806 BAHCC1Q9P281 2608 aa4.85□□□□□ -1.63
CCDC171-205ENST00000472806 FBN1P35555 2871 aaKnown RBP4.85□□□□□ -1.63
CCDC171-205ENST00000472806 MAST4O15021 2626 aa4.84□□□□□ -1.63
CCDC171-205ENST00000472806 STAB1Q9NY15 2570 aa4.84□□□□□ -1.63
CCDC171-205ENST00000472806 H0Y9J4 135 aa4.84□□□□□ -1.63
CCDC171-205ENST00000472806 M0R2N4 97 aa4.84□□□□□ -1.63
CCDC171-205ENST00000472806 C1orf137Q5JT78 98 aa4.84□□□□□ -1.63
CCDC171-205ENST00000472806 FLNBO75369 2602 aaKnown RBP4.84□□□□□ -1.63
CCDC171-205ENST00000472806 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.83□□□□□ -1.64
CCDC171-205ENST00000472806 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
CCDC171-205ENST00000472806 LRCOL1A6NCL2 159 aa4.83□□□□□ -1.64
CCDC171-205ENST00000472806 BPY2O14599 106 aa4.83□□□□□ -1.64
CCDC171-205ENST00000472806 Q8NBF4 154 aa4.83□□□□□ -1.64
CCDC171-205ENST00000472806 SS18L2Q9UHA2 77 aa4.83□□□□□ -1.64
CCDC171-205ENST00000472806 HUWE1Q7Z6Z7 4374 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms