RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 C3orf22Q8N5N4 141 aa9.92□□□□□ -0.82
COMMD3-210ENST00000472610 SPANXCQ9NY87 97 aa9.92□□□□□ -0.82
COMMD3-210ENST00000472610 JOSD1Q15040 202 aaPredicted RBP9.91□□□□□ -0.82
COMMD3-210ENST00000472610 Q6ZRX8 168 aa9.91□□□□□ -0.82
COMMD3-210ENST00000472610 SPAG11AQ6PDA7 123 aa9.9□□□□□ -0.82
COMMD3-210ENST00000472610 TTTY13Q9BZ97 58 aa9.9□□□□□ -0.82
COMMD3-210ENST00000472610 ZNF73O43830 326 aaPredicted RBP9.88□□□□□ -0.83
COMMD3-210ENST00000472610 HINT1P49773 126 aaPredicted RBP9.88□□□□□ -0.83
COMMD3-210ENST00000472610 LINC00483Q53H64 154 aa9.88□□□□□ -0.83
COMMD3-210ENST00000472610 SCGB1D4Q6XE38 83 aa9.88□□□□□ -0.83
COMMD3-210ENST00000472610 LINC00518Q8N0U6 118 aa9.87□□□□□ -0.83
COMMD3-210ENST00000472610 OR13C6PQ8NH95 151 aa9.87□□□□□ -0.83
COMMD3-210ENST00000472610 Q9BRP9 147 aa9.87□□□□□ -0.83
COMMD3-210ENST00000472610 PPDPFQ9H3Y8 114 aa9.87□□□□□ -0.83
COMMD3-210ENST00000472610 ERC2-IT1O76042 136 aa9.86□□□□□ -0.83
COMMD3-210ENST00000472610 SNRPEP62304 92 aaKnown RBP9.86□□□□□ -0.83
COMMD3-210ENST00000472610 ANKRD39Q53RE8 183 aa9.86□□□□□ -0.83
COMMD3-210ENST00000472610 C4orf48Q5BLP8 95 aa9.86□□□□□ -0.83
COMMD3-210ENST00000472610 GAGE2AQ6NT46 116 aa9.86□□□□□ -0.83
COMMD3-210ENST00000472610 COPS9Q8WXC6 57 aa9.86□□□□□ -0.83
COMMD3-210ENST00000472610 SPANXDQ9BXN6 97 aa9.86□□□□□ -0.83
COMMD3-210ENST00000472610 S100A2P29034 98 aa9.85□□□□□ -0.83
COMMD3-210ENST00000472610 ATOH7Q8N100 152 aa9.85□□□□□ -0.83
COMMD3-210ENST00000472610 Q6ZVH6 145 aa9.84□□□□□ -0.83
COMMD3-210ENST00000472610 HIST3H2BBQ8N257 126 aa9.84□□□□□ -0.83
COMMD3-210ENST00000472610 C5orf52A6NGY3 159 aa9.83□□□□□ -0.84
COMMD3-210ENST00000472610 IFITM1P13164 125 aa9.83□□□□□ -0.84
COMMD3-210ENST00000472610 LPAP08519 4548 aa9.83□□□□□ -0.84
COMMD3-210ENST00000472610 S100A6P06703 90 aa9.82□□□□□ -0.84
COMMD3-210ENST00000472610 Q8NBF4 154 aa9.82□□□□□ -0.84
COMMD3-210ENST00000472610 HIST1H2BLQ99880 126 aa9.82□□□□□ -0.84
COMMD3-210ENST00000472610 SSBP3-AS1Q7Z2R9 100 aa9.81□□□□□ -0.84
COMMD3-210ENST00000472610 RETNLBQ9BQ08 111 aa9.81□□□□□ -0.84
COMMD3-210ENST00000472610 SPINK1P00995 79 aa9.79□□□□□ -0.84
COMMD3-210ENST00000472610 PCP2Q8IVA1 136 aa9.79□□□□□ -0.84
COMMD3-210ENST00000472610 IGLV9-49A0A0B4J1Y8 123 aa9.78□□□□□ -0.84
COMMD3-210ENST00000472610 DHRS4-AS1Q9P1J3 65 aa9.78□□□□□ -0.84
COMMD3-210ENST00000472610 HSBP1L1C9JCN9 74 aa9.77□□□□□ -0.85
COMMD3-210ENST00000472610 MOBPQ13875 183 aa9.77□□□□□ -0.85
COMMD3-210ENST00000472610 IGLV7-46A0A075B6I9 117 aa9.76□□□□□ -0.85
COMMD3-210ENST00000472610 MUSTN1Q8IVN3 82 aa9.76□□□□□ -0.85
COMMD3-210ENST00000472610 COX7BP24311 80 aa9.75□□□□□ -0.85
COMMD3-210ENST00000472610 ELOF1P60002 83 aaKnown RBP9.75□□□□□ -0.85
COMMD3-210ENST00000472610 C6orf99Q4VX62 202 aa9.75□□□□□ -0.85
COMMD3-210ENST00000472610 TRBV7-6A0A0J9YX20 115 aa9.74□□□□□ -0.85
COMMD3-210ENST00000472610 TPRXLQ17RH7 258 aa9.74□□□□□ -0.85
COMMD3-210ENST00000472610 ST20-AS1Q8NBB2 130 aa9.74□□□□□ -0.85
COMMD3-210ENST00000472610 A6NDN8 102 aa9.73□□□□□ -0.85
COMMD3-210ENST00000472610 RPS29P62273 56 aaKnown RBP9.73□□□□□ -0.85
COMMD3-210ENST00000472610 SLC25A34Q6PIV7 304 aa9.73□□□□□ -0.85
COMMD3-210ENST00000472610 FP248Q71RG6 208 aaPredicted RBP9.73□□□□□ -0.85
COMMD3-210ENST00000472610 SPRR1BP22528 89 aa9.72□□□□□ -0.85
COMMD3-210ENST00000472610 C9orf153Q5TBE3 101 aa9.71□□□□□ -0.86
COMMD3-210ENST00000472610 TRAV13-2A0A0B4J235 113 aa9.7□□□□□ -0.86
COMMD3-210ENST00000472610 A0A1B0GWB2 263 aa9.7□□□□□ -0.86
COMMD3-210ENST00000472610 CDIP1Q9H305 208 aa9.7□□□□□ -0.86
COMMD3-210ENST00000472610 RNF213Q63HN8 5207 aa9.69□□□□□ -0.86
COMMD3-210ENST00000472610 SCGB1D1O95968 90 aa9.68□□□□□ -0.86
COMMD3-210ENST00000472610 LAMTOR3Q9UHA4 124 aa9.68□□□□□ -0.86
COMMD3-210ENST00000472610 A4D1N5 150 aa9.67□□□□□ -0.86
COMMD3-210ENST00000472610 TAL2Q16559 108 aa9.67□□□□□ -0.86
COMMD3-210ENST00000472610 SLC25A20O43772 301 aa9.65□□□□□ -0.86
COMMD3-210ENST00000472610 TEX49A0A1B0GTD5 131 aa9.64□□□□□ -0.87
COMMD3-210ENST00000472610 Q8N377 158 aa9.64□□□□□ -0.87
COMMD3-210ENST00000472610 DEFB105AQ8NG35 78 aa9.63□□□□□ -0.87
COMMD3-210ENST00000472610 SMIM11BQ8TCY0 68 aa9.63□□□□□ -0.87
COMMD3-210ENST00000472610 NHP2Q9NX24 153 aaKnown RBP9.63□□□□□ -0.87
COMMD3-210ENST00000472610 VAMP3Q15836 100 aa9.61□□□□□ -0.87
COMMD3-210ENST00000472610 COX8AP10176 69 aa9.6□□□□□ -0.87
COMMD3-210ENST00000472610 IGLV5-48A0A075B6I7 105 aa9.59□□□□□ -0.87
COMMD3-210ENST00000472610 KRTAP13-3Q3SY46 172 aa9.59□□□□□ -0.87
COMMD3-210ENST00000472610 DLEU1O43261 78 aa9.58□□□□□ -0.88
COMMD3-210ENST00000472610 Q1RN00 199 aa9.58□□□□□ -0.88
COMMD3-210ENST00000472610 HIST1H4GQ99525 98 aa9.58□□□□□ -0.88
COMMD3-210ENST00000472610 LIMD2Q9BT23 127 aa9.58□□□□□ -0.88
COMMD3-210ENST00000472610 PRO1933Q9H354 126 aa9.58□□□□□ -0.88
COMMD3-210ENST00000472610 A0A0U1RQV1 116 aa9.57□□□□□ -0.88
COMMD3-210ENST00000472610 LINC01547P58512 204 aaPredicted RBP9.56□□□□□ -0.88
COMMD3-210ENST00000472610 CD164Q04900 197 aa9.56□□□□□ -0.88
COMMD3-210ENST00000472610 SMIM29Q86T20 159 aa9.55□□□□□ -0.88
COMMD3-210ENST00000472610 HRCT1Q6UXD1 115 aa9.54□□□□□ -0.88
COMMD3-210ENST00000472610 LINC00575Q6W349 94 aa9.53□□□□□ -0.88
COMMD3-210ENST00000472610 SPATA45Q537H7 98 aa9.52□□□□□ -0.89
COMMD3-210ENST00000472610 C14orf144Q96I85 54 aa9.52□□□□□ -0.89
COMMD3-210ENST00000472610 hADV29S1A0JD25 119 aa9.51□□□□□ -0.89
COMMD3-210ENST00000472610 H7C2G1 150 aa9.51□□□□□ -0.89
COMMD3-210ENST00000472610 VAMP8Q9BV40 100 aa9.51□□□□□ -0.89
COMMD3-210ENST00000472610 HIGD1BQ9P298 99 aa9.51□□□□□ -0.89
COMMD3-210ENST00000472610 PAM16Q9Y3D7 125 aa9.51□□□□□ -0.89
COMMD3-210ENST00000472610 BVES-AS1Q5T3Y7 98 aa9.5□□□□□ -0.89
COMMD3-210ENST00000472610 C12orf57Q99622 126 aa9.49□□□□□ -0.89
COMMD3-210ENST00000472610 F8WEM9 126 aa9.47□□□□□ -0.89
COMMD3-210ENST00000472610 Q5XG85 94 aa9.47□□□□□ -0.89
COMMD3-210ENST00000472610 ASB16-AS1Q495Z4 193 aa9.46□□□□□ -0.9
COMMD3-210ENST00000472610 Q6ZQY7 126 aa9.46□□□□□ -0.9
COMMD3-210ENST00000472610 CFC1BP0CG36 223 aa9.45□□□□□ -0.9
COMMD3-210ENST00000472610 CFC1P0CG37 223 aa9.45□□□□□ -0.9
COMMD3-210ENST00000472610 SEC61BP60468 96 aaKnown RBP9.45□□□□□ -0.9
COMMD3-210ENST00000472610 RAB37Q96AX2 223 aa9.45□□□□□ -0.9
COMMD3-210ENST00000472610 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms