RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 ST20-AS1Q8NBB2 130 aa8.13□□□□□ -1.11
IRF1-208ENST00000472045 LINC00476Q8WZB0 136 aa8.13□□□□□ -1.11
IRF1-208ENST00000472045 SERTAD4-AS1Q5TG53 156 aa8.13□□□□□ -1.11
IRF1-208ENST00000472045 FLNCQ14315 2725 aa8.12□□□□□ -1.11
IRF1-208ENST00000472045 C9orf163Q8N9P6 203 aa8.12□□□□□ -1.11
IRF1-208ENST00000472045 TEX15Q9BXT5 2789 aa8.12□□□□□ -1.11
IRF1-208ENST00000472045 COL6A5A8TX70 2615 aa8.12□□□□□ -1.11
IRF1-208ENST00000472045 ATP5EP56381 51 aaPredicted RBP8.11□□□□□ -1.11
IRF1-208ENST00000472045 WIPF1O43516 503 aa8.1□□□□□ -1.11
IRF1-208ENST00000472045 REV3LO60673 3130 aa8.1□□□□□ -1.11
IRF1-208ENST00000472045 GCN1Q92616 2671 aaKnown RBP8.1□□□□□ -1.11
IRF1-208ENST00000472045 FREM2Q5SZK8 3169 aa8.1□□□□□ -1.11
IRF1-208ENST00000472045 A0A087WVE0 104 aa8.1□□□□□ -1.11
IRF1-208ENST00000472045 CASC10Q5T4H9 136 aa8.1□□□□□ -1.11
IRF1-208ENST00000472045 IGKV2D-30A0A075B6S6 120 aa8.09□□□□□ -1.11
IRF1-208ENST00000472045 IGKV2-30P06310 120 aa8.09□□□□□ -1.11
IRF1-208ENST00000472045 ZNF575Q86XF7 245 aa8.09□□□□□ -1.11
IRF1-208ENST00000472045 IGLV1-50A0A075B6I6 118 aa8.09□□□□□ -1.11
IRF1-208ENST00000472045 Q6Q795 121 aa8.09□□□□□ -1.11
IRF1-208ENST00000472045 BOD1L1Q8NFC6 3051 aa8.09□□□□□ -1.12
IRF1-208ENST00000472045 PCOTHQ58A44 107 aa8.08□□□□□ -1.12
IRF1-208ENST00000472045 H0Y9P7 68 aa8.08□□□□□ -1.12
IRF1-208ENST00000472045 BRK1Q8WUW1 75 aa8.08□□□□□ -1.12
IRF1-208ENST00000472045 TRAV7A0A075B6U4 112 aa8.08□□□□□ -1.12
IRF1-208ENST00000472045 LINC00846Q9NV44 126 aa8.08□□□□□ -1.12
IRF1-208ENST00000472045 IGLV6-57P01721 117 aa8.07□□□□□ -1.12
IRF1-208ENST00000472045 MPLKIPQ8TAP9 179 aa8.07□□□□□ -1.12
IRF1-208ENST00000472045 FAM218AQ96MZ4 157 aa8.07□□□□□ -1.12
IRF1-208ENST00000472045 SPTBN5Q9NRC6 3674 aaKnown RBP8.07□□□□□ -1.12
IRF1-208ENST00000472045 CR1P17927 2039 aa8.07□□□□□ -1.12
IRF1-208ENST00000472045 COX7CP15954 63 aa8.06□□□□□ -1.12
IRF1-208ENST00000472045 ATMQ13315 3056 aa8.06□□□□□ -1.12
IRF1-208ENST00000472045 ZNF861PO60384 105 aa8.06□□□□□ -1.12
IRF1-208ENST00000472045 SPINK1P00995 79 aa8.05□□□□□ -1.12
IRF1-208ENST00000472045 A0A1B0GW54 56 aa8.05□□□□□ -1.12
IRF1-208ENST00000472045 KCNQ1DNQ9H478 68 aa8.05□□□□□ -1.12
IRF1-208ENST00000472045 LINC00313P59037 77 aa8.04□□□□□ -1.12
IRF1-208ENST00000472045 COL12A1Q99715 3063 aa8.03□□□□□ -1.12
IRF1-208ENST00000472045 CXCL6P80162 114 aa8.03□□□□□ -1.12
IRF1-208ENST00000472045 LINC00304Q8N9R0 145 aa8.03□□□□□ -1.12
IRF1-208ENST00000472045 V9GYY9 64 aa8.03□□□□□ -1.12
IRF1-208ENST00000472045 hDV103S1A0JD37 113 aa8.03□□□□□ -1.12
IRF1-208ENST00000472045 TLX1NBP0CAT3 122 aa8.03□□□□□ -1.12
IRF1-208ENST00000472045 CNBPP62633 177 aaKnown RBP8.03□□□□□ -1.12
IRF1-208ENST00000472045 SPEGQ15772 3267 aa8.03□□□□□ -1.12
IRF1-208ENST00000472045 C9orf129Q5T035 196 aaKnown RBP8.02□□□□□ -1.12
IRF1-208ENST00000472045 DMXL1Q9Y485 3027 aa8.02□□□□□ -1.12
IRF1-208ENST00000472045 TNP2Q05952 138 aa8.02□□□□□ -1.13
IRF1-208ENST00000472045 LINC00528Q8N1L1 170 aa8.02□□□□□ -1.13
IRF1-208ENST00000472045 LITAFQ99732 161 aa8.02□□□□□ -1.13
IRF1-208ENST00000472045 ATP11AUNQ6ZP68 121 aa8.01□□□□□ -1.13
IRF1-208ENST00000472045 SPAG11AQ6PDA7 123 aa8□□□□□ -1.13
IRF1-208ENST00000472045 Q96NJ1 140 aa8□□□□□ -1.13
IRF1-208ENST00000472045 CCDC179H3BU77 68 aa8□□□□□ -1.13
IRF1-208ENST00000472045 IGLV7-43P04211 117 aa7.99□□□□□ -1.13
IRF1-208ENST00000472045 TP53AIP1Q9HCN2 124 aa7.99□□□□□ -1.13
IRF1-208ENST00000472045 SSBP3-AS1Q7Z2R9 100 aa7.98□□□□□ -1.13
IRF1-208ENST00000472045 CDIP1Q9H305 208 aa7.98□□□□□ -1.13
IRF1-208ENST00000472045 PLA2G2DQ9UNK4 145 aa7.98□□□□□ -1.13
IRF1-208ENST00000472045 C1orf64Q8NEQ6 169 aa7.98□□□□□ -1.13
IRF1-208ENST00000472045 PSORS1C2Q9UIG4 136 aa7.98□□□□□ -1.13
IRF1-208ENST00000472045 Q6ZQT0 140 aa7.98□□□□□ -1.13
IRF1-208ENST00000472045 A0A1W2PNN7 141 aa7.97□□□□□ -1.13
IRF1-208ENST00000472045 SMIM29Q86T20 159 aa7.97□□□□□ -1.13
IRF1-208ENST00000472045 LOC110117498A0A087WWA1 95 aa7.97□□□□□ -1.13
IRF1-208ENST00000472045 TACC2O95359 2948 aa7.96□□□□□ -1.13
IRF1-208ENST00000472045 C7orf65Q6ZTY9 151 aa7.96□□□□□ -1.14
IRF1-208ENST00000472045 ZZEF1O43149 2961 aa7.96□□□□□ -1.14
IRF1-208ENST00000472045 TRBV7-4A0A0J9YYF1 115 aa7.96□□□□□ -1.14
IRF1-208ENST00000472045 TRBV7-7A0A0K0K1E9 115 aa7.96□□□□□ -1.14
IRF1-208ENST00000472045 NOTCH1P46531 2555 aa7.95□□□□□ -1.14
IRF1-208ENST00000472045 SVIPQ8NHG7 77 aa7.95□□□□□ -1.14
IRF1-208ENST00000472045 UBR5O95071 2799 aaPredicted RBP7.94□□□□□ -1.14
IRF1-208ENST00000472045 C8orf87E5RJ46 101 aa7.93□□□□□ -1.14
IRF1-208ENST00000472045 COX6B2Q6YFQ2 88 aa7.93□□□□□ -1.14
IRF1-208ENST00000472045 TMEM254Q8TBM7 123 aa7.93□□□□□ -1.14
IRF1-208ENST00000472045 A6NED7 52 aa7.92□□□□□ -1.14
IRF1-208ENST00000472045 ITPR2Q14571 2701 aa7.92□□□□□ -1.14
IRF1-208ENST00000472045 SMIM26A0A096LP01 95 aa7.92□□□□□ -1.14
IRF1-208ENST00000472045 ANAPC11Q9NYG5 84 aa7.92□□□□□ -1.14
IRF1-208ENST00000472045 ADGRG4Q8IZF6 3080 aa7.91□□□□□ -1.14
IRF1-208ENST00000472045 NBEAL1Q6ZS30 2694 aa7.9□□□□□ -1.15
IRF1-208ENST00000472045 IGFL1Q6UW32 110 aa7.89□□□□□ -1.15
IRF1-208ENST00000472045 KALRNO60229 2985 aa7.89□□□□□ -1.15
IRF1-208ENST00000472045 EIF4EBP3O60516 100 aaPredicted RBP7.88□□□□□ -1.15
IRF1-208ENST00000472045 A8MWP4 228 aa7.88□□□□□ -1.15
IRF1-208ENST00000472045 SMCPP49901 116 aaPredicted RBP7.88□□□□□ -1.15
IRF1-208ENST00000472045 SPRR4Q96PI1 79 aa7.87□□□□□ -1.15
IRF1-208ENST00000472045 C9orf92A6NGG3 77 aa7.87□□□□□ -1.15
IRF1-208ENST00000472045 A0A0U1RQV1 116 aa7.87□□□□□ -1.15
IRF1-208ENST00000472045 Q8N377 158 aa7.85□□□□□ -1.15
IRF1-208ENST00000472045 NBEAQ8NFP9 2946 aa7.85□□□□□ -1.15
IRF1-208ENST00000472045 TRAV22A0A0B4J277 110 aa7.84□□□□□ -1.15
IRF1-208ENST00000472045 DSCR10P59022 87 aa7.84□□□□□ -1.15
IRF1-208ENST00000472045 OBSCN-AS1Q96MR7 158 aa7.84□□□□□ -1.15
IRF1-208ENST00000472045 MRPL34Q9BQ48 92 aaKnown RBP7.84□□□□□ -1.15
IRF1-208ENST00000472045 LCE6AA0A183 80 aa7.84□□□□□ -1.15
IRF1-208ENST00000472045 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.83□□□□□ -1.16
IRF1-208ENST00000472045 ITPR1Q14643 2758 aa7.83□□□□□ -1.16
IRF1-208ENST00000472045 IGLV5-37A0A075B6J1 123 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms