RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 LINC01545Q5VT33 79 aa6.57□□□□□ -1.36
COL4A3-205ENST00000471862 Q6ZRX8 168 aa6.57□□□□□ -1.36
COL4A3-205ENST00000471862 Q8NBF4 154 aa6.57□□□□□ -1.36
COL4A3-205ENST00000471862 LITAFQ99732 161 aa6.57□□□□□ -1.36
COL4A3-205ENST00000471862 TRAV23DV6A0A075B6W5 121 aa6.55□□□□□ -1.36
COL4A3-205ENST00000471862 NPC2P61916 151 aa6.55□□□□□ -1.36
COL4A3-205ENST00000471862 S100A7L2Q5SY68 101 aa6.55□□□□□ -1.36
COL4A3-205ENST00000471862 GAGE2AQ6NT46 116 aa6.55□□□□□ -1.36
COL4A3-205ENST00000471862 TIMM17BO60830 172 aa6.54□□□□□ -1.36
COL4A3-205ENST00000471862 C4orf48Q5BLP8 95 aa6.54□□□□□ -1.36
COL4A3-205ENST00000471862 PET117Q6UWS5 81 aa6.54□□□□□ -1.36
COL4A3-205ENST00000471862 FP248Q71RG6 208 aaPredicted RBP6.54□□□□□ -1.36
COL4A3-205ENST00000471862 FAT4Q6V0I7 4981 aa6.54□□□□□ -1.36
COL4A3-205ENST00000471862 LCE2BO14633 110 aa6.53□□□□□ -1.36
COL4A3-205ENST00000471862 SPINK1P00995 79 aa6.53□□□□□ -1.36
COL4A3-205ENST00000471862 COA6Q5JTJ3 125 aaKnown RBP6.53□□□□□ -1.36
COL4A3-205ENST00000471862 LINC00308Q8TCZ7 52 aa6.53□□□□□ -1.36
COL4A3-205ENST00000471862 CDIP1Q9H305 208 aa6.53□□□□□ -1.36
COL4A3-205ENST00000471862 ZNF73O43830 326 aaPredicted RBP6.52□□□□□ -1.37
COL4A3-205ENST00000471862 C3orf79P0CE67 100 aa6.52□□□□□ -1.37
COL4A3-205ENST00000471862 MOBPQ13875 183 aa6.52□□□□□ -1.37
COL4A3-205ENST00000471862 SSBP3-AS1Q7Z2R9 100 aa6.52□□□□□ -1.37
COL4A3-205ENST00000471862 SPANXCQ9NY87 97 aa6.52□□□□□ -1.37
COL4A3-205ENST00000471862 RPS29P62273 56 aaKnown RBP6.51□□□□□ -1.37
COL4A3-205ENST00000471862 JOSD1Q15040 202 aaPredicted RBP6.51□□□□□ -1.37
COL4A3-205ENST00000471862 TTTY13Q9BZ97 58 aa6.51□□□□□ -1.37
COL4A3-205ENST00000471862 IGLV9-49A0A0B4J1Y8 123 aa6.5□□□□□ -1.37
COL4A3-205ENST00000471862 A0A0U1RQV1 116 aa6.5□□□□□ -1.37
COL4A3-205ENST00000471862 ZNF815PA8K554 130 aa6.5□□□□□ -1.37
COL4A3-205ENST00000471862 C5orf52A6NGY3 159 aa6.49□□□□□ -1.37
COL4A3-205ENST00000471862 KRTAP13-3Q3SY46 172 aa6.49□□□□□ -1.37
COL4A3-205ENST00000471862 Q8N377 158 aa6.49□□□□□ -1.37
COL4A3-205ENST00000471862 CBY1Q9Y3M2 126 aa6.49□□□□□ -1.37
COL4A3-205ENST00000471862 ST20-AS1Q8NBB2 130 aa6.48□□□□□ -1.37
COL4A3-205ENST00000471862 SPRR1BP22528 89 aa6.47□□□□□ -1.37
COL4A3-205ENST00000471862 LCE2AQ5TA79 106 aaPredicted RBP6.47□□□□□ -1.37
COL4A3-205ENST00000471862 SPANXDQ9BXN6 97 aa6.47□□□□□ -1.37
COL4A3-205ENST00000471862 HINT1P49773 126 aaPredicted RBP6.46□□□□□ -1.38
COL4A3-205ENST00000471862 KRTDAPP60985 99 aa6.46□□□□□ -1.38
COL4A3-205ENST00000471862 OR13C6PQ8NH95 151 aa6.46□□□□□ -1.38
COL4A3-205ENST00000471862 ANKRD39Q53RE8 183 aa6.45□□□□□ -1.38
COL4A3-205ENST00000471862 LINC00518Q8N0U6 118 aa6.45□□□□□ -1.38
COL4A3-205ENST00000471862 ELOF1P60002 83 aaKnown RBP6.44□□□□□ -1.38
COL4A3-205ENST00000471862 C9orf153Q5TBE3 101 aa6.44□□□□□ -1.38
COL4A3-205ENST00000471862 DHRS4-AS1Q9P1J3 65 aa6.44□□□□□ -1.38
COL4A3-205ENST00000471862 SLC25A20O43772 301 aa6.43□□□□□ -1.38
COL4A3-205ENST00000471862 C6orf99Q4VX62 202 aa6.43□□□□□ -1.38
COL4A3-205ENST00000471862 C20orf202A1L168 122 aa6.42□□□□□ -1.38
COL4A3-205ENST00000471862 COX7BP24311 80 aa6.42□□□□□ -1.38
COL4A3-205ENST00000471862 ASB16-AS1Q495Z4 193 aa6.42□□□□□ -1.38
COL4A3-205ENST00000471862 IFITM1P13164 125 aa6.41□□□□□ -1.38
COL4A3-205ENST00000471862 SCGB1D4Q6XE38 83 aa6.41□□□□□ -1.38
COL4A3-205ENST00000471862 ATOH7Q8N100 152 aa6.41□□□□□ -1.38
COL4A3-205ENST00000471862 TRBV7-6A0A0J9YX20 115 aa6.4□□□□□ -1.38
COL4A3-205ENST00000471862 SLC25A34Q6PIV7 304 aa6.4□□□□□ -1.38
COL4A3-205ENST00000471862 Q6ZVH6 145 aa6.4□□□□□ -1.38
COL4A3-205ENST00000471862 PCP2Q8IVA1 136 aa6.4□□□□□ -1.38
COL4A3-205ENST00000471862 AKR1D1P51857 326 aa6.39□□□□□ -1.39
COL4A3-205ENST00000471862 COPS9Q8WXC6 57 aa6.39□□□□□ -1.39
COL4A3-205ENST00000471862 XP32Q5T750 250 aa6.38□□□□□ -1.39
COL4A3-205ENST00000471862 MUSTN1Q8IVN3 82 aa6.38□□□□□ -1.39
COL4A3-205ENST00000471862 KRTAP4-1Q9BYQ7 146 aa6.38□□□□□ -1.39
COL4A3-205ENST00000471862 LAMTOR3Q9UHA4 124 aa6.38□□□□□ -1.39
COL4A3-205ENST00000471862 A0A1B0GWB2 263 aa6.37□□□□□ -1.39
COL4A3-205ENST00000471862 LINC01547P58512 204 aaPredicted RBP6.37□□□□□ -1.39
COL4A3-205ENST00000471862 SMIM29Q86T20 159 aa6.37□□□□□ -1.39
COL4A3-205ENST00000471862 TEX49A0A1B0GTD5 131 aa6.36□□□□□ -1.39
COL4A3-205ENST00000471862 SEC61BP60468 96 aaKnown RBP6.36□□□□□ -1.39
COL4A3-205ENST00000471862 SNRPEP62304 92 aaKnown RBP6.36□□□□□ -1.39
COL4A3-205ENST00000471862 TAL2Q16559 108 aa6.36□□□□□ -1.39
COL4A3-205ENST00000471862 HIST3H2BBQ8N257 126 aa6.36□□□□□ -1.39
COL4A3-205ENST00000471862 IGLV5-48A0A075B6I7 105 aa6.35□□□□□ -1.39
COL4A3-205ENST00000471862 A6NDN8 102 aa6.35□□□□□ -1.39
COL4A3-205ENST00000471862 Q1RN00 199 aa6.35□□□□□ -1.39
COL4A3-205ENST00000471862 HIST1H2BLQ99880 126 aa6.35□□□□□ -1.39
COL4A3-205ENST00000471862 LIMD2Q9BT23 127 aa6.35□□□□□ -1.39
COL4A3-205ENST00000471862 CD164Q04900 197 aa6.34□□□□□ -1.39
COL4A3-205ENST00000471862 HRCT1Q6UXD1 115 aa6.34□□□□□ -1.39
COL4A3-205ENST00000471862 DEFB105AQ8NG35 78 aa6.34□□□□□ -1.39
COL4A3-205ENST00000471862 TRAV13-2A0A0B4J235 113 aa6.33□□□□□ -1.4
COL4A3-205ENST00000471862 SMIM11BQ8TCY0 68 aa6.33□□□□□ -1.4
COL4A3-205ENST00000471862 PRO1933Q9H354 126 aa6.33□□□□□ -1.4
COL4A3-205ENST00000471862 A4D1N5 150 aa6.32□□□□□ -1.4
COL4A3-205ENST00000471862 Q5XG85 94 aa6.32□□□□□ -1.4
COL4A3-205ENST00000471862 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
COL4A3-205ENST00000471862 S100A2P29034 98 aa6.3□□□□□ -1.4
COL4A3-205ENST00000471862 H7C2G1 150 aa6.29□□□□□ -1.4
COL4A3-205ENST00000471862 S100A1P23297 94 aa6.29□□□□□ -1.4
COL4A3-205ENST00000471862 NHP2Q9NX24 153 aaKnown RBP6.29□□□□□ -1.4
COL4A3-205ENST00000471862 A0A0G2JQZ4 141 aa6.28□□□□□ -1.4
COL4A3-205ENST00000471862 SMCPP49901 116 aaPredicted RBP6.28□□□□□ -1.4
COL4A3-205ENST00000471862 HSBP1L1C9JCN9 74 aa6.27□□□□□ -1.41
COL4A3-205ENST00000471862 C1orf195Q5TG92 126 aa6.26□□□□□ -1.41
COL4A3-205ENST00000471862 LINC00575Q6W349 94 aa6.26□□□□□ -1.41
COL4A3-205ENST00000471862 C9orf92A6NGG3 77 aa6.25□□□□□ -1.41
COL4A3-205ENST00000471862 S100A6P06703 90 aa6.25□□□□□ -1.41
COL4A3-205ENST00000471862 VAMP3Q15836 100 aa6.24□□□□□ -1.41
COL4A3-205ENST00000471862 KRTAP19-2Q3LHN2 52 aa6.23□□□□□ -1.41
COL4A3-205ENST00000471862 PCOTHQ58A44 107 aa6.23□□□□□ -1.41
COL4A3-205ENST00000471862 LCE2CQ5TA81 110 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms