RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 SIX6O95475 246 aa1.53□□□□□ -2.16
LRCH3-213ENST00000471667 RPL39P62891 51 aaKnown RBP1.53□□□□□ -2.16
LRCH3-213ENST00000471667 SERF2P84101 59 aa1.53□□□□□ -2.16
LRCH3-213ENST00000471667 PDZD11Q5EBL8 140 aa1.53□□□□□ -2.16
LRCH3-213ENST00000471667 Q6ZRX8 168 aa1.53□□□□□ -2.16
LRCH3-213ENST00000471667 ST20-AS1Q8NBB2 130 aa1.53□□□□□ -2.16
LRCH3-213ENST00000471667 CNFNQ9BYD5 112 aa1.53□□□□□ -2.16
LRCH3-213ENST00000471667 SMIM3Q9BZL3 60 aa1.53□□□□□ -2.16
LRCH3-213ENST00000471667 VCX2Q9H322 139 aa1.53□□□□□ -2.16
LRCH3-213ENST00000471667 CTXND1A0A1B0GTU2 59 aa1.52□□□□□ -2.17
LRCH3-213ENST00000471667 CENPXA8MT69 81 aa1.52□□□□□ -2.17
LRCH3-213ENST00000471667 ATP6V1G2O95670 118 aa1.52□□□□□ -2.17
LRCH3-213ENST00000471667 FA2HQ7L5A8 372 aa1.52□□□□□ -2.17
LRCH3-213ENST00000471667 PSMG3Q9BT73 122 aaPredicted RBP1.52□□□□□ -2.17
LRCH3-213ENST00000471667 SPRR2GQ9BYE4 73 aa1.52□□□□□ -2.17
LRCH3-213ENST00000471667 HSPB11Q9Y547 144 aa1.52□□□□□ -2.17
LRCH3-213ENST00000471667 ATP6V0CP27449 155 aa1.51□□□□□ -2.17
LRCH3-213ENST00000471667 PYDC2Q56P42 97 aa1.51□□□□□ -2.17
LRCH3-213ENST00000471667 SFTA2Q6UW10 78 aa1.51□□□□□ -2.17
LRCH3-213ENST00000471667 SMIM12Q96EX1 92 aa1.51□□□□□ -2.17
LRCH3-213ENST00000471667 Q9H521 79 aa1.51□□□□□ -2.17
LRCH3-213ENST00000471667 CDKN2A-AS1Q9UH64 79 aa1.51□□□□□ -2.17
LRCH3-213ENST00000471667 ERG28Q9UKR5 140 aa1.51□□□□□ -2.17
LRCH3-213ENST00000471667 MUC5ACP98088 5654 aa1.51□□□□□ -2.17
LRCH3-213ENST00000471667 MUC5BQ9HC84 5762 aaPredicted RBP1.5□□□□□ -2.17
LRCH3-213ENST00000471667 NCR3O14931 201 aa1.5□□□□□ -2.17
LRCH3-213ENST00000471667 SPRR1BP22528 89 aa1.5□□□□□ -2.17
LRCH3-213ENST00000471667 CXCL6P80162 114 aa1.5□□□□□ -2.17
LRCH3-213ENST00000471667 TAL2Q16559 108 aa1.5□□□□□ -2.17
LRCH3-213ENST00000471667 LINC00299Q6ZSB3 139 aa1.5□□□□□ -2.17
LRCH3-213ENST00000471667 ENKURQ8TC29 256 aa1.5□□□□□ -2.17
LRCH3-213ENST00000471667 C20orf78Q9BR46 151 aa1.5□□□□□ -2.17
LRCH3-213ENST00000471667 CBY1Q9Y3M2 126 aa1.5□□□□□ -2.17
LRCH3-213ENST00000471667 A0A087WXM4 84 aa1.49□□□□□ -2.17
LRCH3-213ENST00000471667 TRBV10-3A0A0K0K1G6 114 aa1.49□□□□□ -2.17
LRCH3-213ENST00000471667 H3BRM9 83 aa1.49□□□□□ -2.17
LRCH3-213ENST00000471667 LST1O00453 97 aa1.49□□□□□ -2.17
LRCH3-213ENST00000471667 GNG4P50150 75 aa1.49□□□□□ -2.17
LRCH3-213ENST00000471667 LINC00158P58513 81 aa1.49□□□□□ -2.17
LRCH3-213ENST00000471667 ZNF345Q14585 488 aa1.49□□□□□ -2.17
LRCH3-213ENST00000471667 AKR1C8PQ5T2L2 129 aa1.49□□□□□ -2.17
LRCH3-213ENST00000471667 C2orf66Q6UXQ4 117 aa1.49□□□□□ -2.17
LRCH3-213ENST00000471667 SOSTDC1Q6X4U4 206 aa1.49□□□□□ -2.17
LRCH3-213ENST00000471667 AMN1Q8IY45 258 aa1.49□□□□□ -2.17
LRCH3-213ENST00000471667 BOD1L2Q8IYS8 172 aa1.49□□□□□ -2.17
LRCH3-213ENST00000471667 LINC00518Q8N0U6 118 aa1.49□□□□□ -2.17
LRCH3-213ENST00000471667 LOC389332A0A1B0GUA5 103 aa1.48□□□□□ -2.17
LRCH3-213ENST00000471667 MAP1LC3B2A6NCE7 125 aa1.48□□□□□ -2.17
LRCH3-213ENST00000471667 ZNF815PA8K554 130 aa1.48□□□□□ -2.17
LRCH3-213ENST00000471667 ZNF73O43830 326 aaPredicted RBP1.48□□□□□ -2.17
LRCH3-213ENST00000471667 RAB4AP20338 218 aa1.48□□□□□ -2.17
LRCH3-213ENST00000471667 DDTP30046 118 aa1.48□□□□□ -2.17
LRCH3-213ENST00000471667 HERV-K104P63124 156 aa1.48□□□□□ -2.17
LRCH3-213ENST00000471667 PMVKQ15126 192 aa1.48□□□□□ -2.17
LRCH3-213ENST00000471667 Q5BKY6 102 aa1.48□□□□□ -2.17
LRCH3-213ENST00000471667 CENPWQ5EE01 88 aa1.48□□□□□ -2.17
LRCH3-213ENST00000471667 S100A7L2Q5SY68 101 aa1.48□□□□□ -2.17
LRCH3-213ENST00000471667 TRIQKQ629K1 86 aa1.48□□□□□ -2.17
LRCH3-213ENST00000471667 RPL7L1Q6DKI1 246 aaKnown RBP1.48□□□□□ -2.17
LRCH3-213ENST00000471667 WFDC13Q8IUB5 93 aa1.48□□□□□ -2.17
LRCH3-213ENST00000471667 MAP1LC3BQ9GZQ8 125 aa1.48□□□□□ -2.17
LRCH3-213ENST00000471667 NXT2Q9NPJ8 142 aaKnown RBP1.48□□□□□ -2.17
LRCH3-213ENST00000471667 TEX49A0A1B0GTD5 131 aa1.47□□□□□ -2.17
LRCH3-213ENST00000471667 LINC00862A6NCI5 91 aa1.47□□□□□ -2.17
LRCH3-213ENST00000471667 F8WEM9 126 aa1.47□□□□□ -2.17
LRCH3-213ENST00000471667 SMKR1H3BMG3 65 aa1.47□□□□□ -2.17
LRCH3-213ENST00000471667 GIPP09681 153 aaPredicted RBP1.47□□□□□ -2.17
LRCH3-213ENST00000471667 IL15RAQ13261 267 aa1.47□□□□□ -2.17
LRCH3-213ENST00000471667 H1FX-AS1Q4G0G2 97 aa1.47□□□□□ -2.17
LRCH3-213ENST00000471667 PRR15Q8IV56 129 aa1.47□□□□□ -2.17
LRCH3-213ENST00000471667 DEFB105AQ8NG35 78 aa1.47□□□□□ -2.17
LRCH3-213ENST00000471667 FAM104AQ969W3 186 aa1.47□□□□□ -2.17
LRCH3-213ENST00000471667 AMELXQ99217 191 aa1.47□□□□□ -2.17
LRCH3-213ENST00000471667 SMIM2Q9BVW6 85 aa1.47□□□□□ -2.17
LRCH3-213ENST00000471667 CYSLTR1Q9Y271 337 aa1.47□□□□□ -2.17
LRCH3-213ENST00000471667 TRAV23DV6A0A075B6W5 121 aa1.46□□□□□ -2.18
LRCH3-213ENST00000471667 A0A1B0GUT8 65 aa1.46□□□□□ -2.18
LRCH3-213ENST00000471667 HMSDA8MTL9 139 aa1.46□□□□□ -2.18
LRCH3-213ENST00000471667 D6R8Y8 96 aa1.46□□□□□ -2.18
LRCH3-213ENST00000471667 G0S2P27469 103 aa1.46□□□□□ -2.18
LRCH3-213ENST00000471667 CKS2P33552 79 aa1.46□□□□□ -2.18
LRCH3-213ENST00000471667 CYSTM1Q9H1C7 97 aa1.46□□□□□ -2.18
LRCH3-213ENST00000471667 CST9LQ9H4G1 147 aa1.46□□□□□ -2.18
LRCH3-213ENST00000471667 TRBV24-1A0A075B6N3 115 aa1.45□□□□□ -2.18
LRCH3-213ENST00000471667 TINCRA0A1B0GVN0 87 aa1.45□□□□□ -2.18
LRCH3-213ENST00000471667 A0A1B0GWB2 263 aa1.45□□□□□ -2.18
LRCH3-213ENST00000471667 LINC00587B1AMM8 73 aa1.45□□□□□ -2.18
LRCH3-213ENST00000471667 SPINK8P0C7L1 97 aa1.45□□□□□ -2.18
LRCH3-213ENST00000471667 SPINK7P58062 85 aa1.45□□□□□ -2.18
LRCH3-213ENST00000471667 COMMD7Q86VX2 200 aa1.45□□□□□ -2.18
LRCH3-213ENST00000471667 PPP1R1CQ8WVI7 109 aa1.45□□□□□ -2.18
LRCH3-213ENST00000471667 SS18L2Q9UHA2 77 aa1.45□□□□□ -2.18
LRCH3-213ENST00000471667 GATCO43716 136 aaKnown RBP1.44□□□□□ -2.18
LRCH3-213ENST00000471667 S100A5P33763 92 aa1.44□□□□□ -2.18
LRCH3-213ENST00000471667 CCL20P78556 96 aa1.44□□□□□ -2.18
LRCH3-213ENST00000471667 ZNF726P1Q15940 193 aa1.44□□□□□ -2.18
LRCH3-213ENST00000471667 LCA10Q71F78 164 aa1.44□□□□□ -2.18
LRCH3-213ENST00000471667 KCNRGQ8N5I3 272 aa1.44□□□□□ -2.18
LRCH3-213ENST00000471667 SFT2D1Q8WV19 159 aa1.44□□□□□ -2.18
LRCH3-213ENST00000471667 PLAC4Q8WY50 150 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms