RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 SPRR4Q96PI1 79 aa3.29□□□□□ -1.88
GPNMB-208ENST00000470994 SEC11CQ9BY50 192 aa3.29□□□□□ -1.88
GPNMB-208ENST00000470994 ZNF706Q9Y5V0 76 aaPredicted RBP3.29□□□□□ -1.88
GPNMB-208ENST00000470994 ETDCA0A1B0GVM5 59 aa3.28□□□□□ -1.88
GPNMB-208ENST00000470994 NCR3O14931 201 aa3.28□□□□□ -1.88
GPNMB-208ENST00000470994 HBDP02042 147 aa3.28□□□□□ -1.88
GPNMB-208ENST00000470994 MEIG1Q5JSS6 88 aa3.28□□□□□ -1.88
GPNMB-208ENST00000470994 CLLU1Q5K131 121 aa3.28□□□□□ -1.88
GPNMB-208ENST00000470994 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
GPNMB-208ENST00000470994 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
GPNMB-208ENST00000470994 GAGE2AQ6NT46 116 aa3.28□□□□□ -1.88
GPNMB-208ENST00000470994 UQCC3Q6UW78 93 aa3.28□□□□□ -1.88
GPNMB-208ENST00000470994 BOD1L2Q8IYS8 172 aa3.28□□□□□ -1.88
GPNMB-208ENST00000470994 Q8NBF4 154 aa3.28□□□□□ -1.88
GPNMB-208ENST00000470994 CHTOPQ9Y3Y2 248 aaKnown RBP3.28□□□□□ -1.88
GPNMB-208ENST00000470994 TRAPPC1Q9Y5R8 145 aa3.28□□□□□ -1.88
GPNMB-208ENST00000470994 SMIM13P0DJ93 91 aa3.27□□□□□ -1.89
GPNMB-208ENST00000470994 CTAG1AP78358 180 aa3.27□□□□□ -1.89
GPNMB-208ENST00000470994 S100A12P80511 92 aa3.27□□□□□ -1.89
GPNMB-208ENST00000470994 SFTA2Q6UW10 78 aa3.27□□□□□ -1.89
GPNMB-208ENST00000470994 FP248Q71RG6 208 aaPredicted RBP3.27□□□□□ -1.89
GPNMB-208ENST00000470994 A0A096LNJ9 63 aa3.26□□□□□ -1.89
GPNMB-208ENST00000470994 IGLV9-49A0A0B4J1Y8 123 aa3.26□□□□□ -1.89
GPNMB-208ENST00000470994 MIR7-3HGQ8N6C7 128 aa3.26□□□□□ -1.89
GPNMB-208ENST00000470994 C18orf32Q8TCD1 76 aa3.26□□□□□ -1.89
GPNMB-208ENST00000470994 NDUFA12Q9UI09 145 aa3.26□□□□□ -1.89
GPNMB-208ENST00000470994 TRBV10-3A0A0K0K1G6 114 aa3.25□□□□□ -1.89
GPNMB-208ENST00000470994 TMEM223A0PJW6 202 aa3.25□□□□□ -1.89
GPNMB-208ENST00000470994 H0Y8G0 127 aa3.25□□□□□ -1.89
GPNMB-208ENST00000470994 SPINK1P00995 79 aa3.25□□□□□ -1.89
GPNMB-208ENST00000470994 MOBPQ13875 183 aa3.25□□□□□ -1.89
GPNMB-208ENST00000470994 COMMD7Q86VX2 200 aa3.25□□□□□ -1.89
GPNMB-208ENST00000470994 LINC00587B1AMM8 73 aa3.24□□□□□ -1.89
GPNMB-208ENST00000470994 ASB16-AS1Q495Z4 193 aa3.24□□□□□ -1.89
GPNMB-208ENST00000470994 IFI27L1Q96BM0 104 aa3.24□□□□□ -1.89
GPNMB-208ENST00000470994 MAP1LC3CQ9BXW4 147 aa3.24□□□□□ -1.89
GPNMB-208ENST00000470994 KCNQ1DNQ9H478 68 aa3.24□□□□□ -1.89
GPNMB-208ENST00000470994 MYMXA0A1B0GTQ4 84 aa3.23□□□□□ -1.89
GPNMB-208ENST00000470994 ERC2-IT1O76042 136 aa3.23□□□□□ -1.89
GPNMB-208ENST00000470994 HERV-K104P63124 156 aa3.23□□□□□ -1.89
GPNMB-208ENST00000470994 RHEBQ15382 184 aa3.23□□□□□ -1.89
GPNMB-208ENST00000470994 C9orf153Q5TBE3 101 aa3.23□□□□□ -1.89
GPNMB-208ENST00000470994 SSBP3-AS1Q7Z2R9 100 aa3.23□□□□□ -1.89
GPNMB-208ENST00000470994 TRAV12-1A0A0B4J245 112 aa3.22□□□□□ -1.89
GPNMB-208ENST00000470994 SLC25A20O43772 301 aa3.22□□□□□ -1.89
GPNMB-208ENST00000470994 APOC3P02656 99 aa3.22□□□□□ -1.89
GPNMB-208ENST00000470994 DDTP30046 118 aa3.22□□□□□ -1.89
GPNMB-208ENST00000470994 SPRR1AP35321 89 aa3.22□□□□□ -1.89
GPNMB-208ENST00000470994 IFITM2Q01629 132 aa3.22□□□□□ -1.89
GPNMB-208ENST00000470994 S100A7L2Q5SY68 101 aa3.22□□□□□ -1.89
GPNMB-208ENST00000470994 FAM19A2Q8N3H0 131 aa3.22□□□□□ -1.89
GPNMB-208ENST00000470994 KRTAP4-1Q9BYQ7 146 aa3.22□□□□□ -1.89
GPNMB-208ENST00000470994 FSIP2Q5CZC0 6907 aa3.21□□□□□ -1.89
GPNMB-208ENST00000470994 HSBP1O75506 76 aa3.21□□□□□ -1.9
GPNMB-208ENST00000470994 LINC00483Q53H64 154 aa3.21□□□□□ -1.9
GPNMB-208ENST00000470994 CHCHD1Q96BP2 118 aaKnown RBP3.21□□□□□ -1.9
GPNMB-208ENST00000470994 MIEN1Q9BRT3 115 aa3.21□□□□□ -1.9
GPNMB-208ENST00000470994 PRO0461Q9UI25 63 aa3.21□□□□□ -1.9
GPNMB-208ENST00000470994 KRTAP4-16G5E9R7 235 aaPredicted RBP3.2□□□□□ -1.9
GPNMB-208ENST00000470994 LEPROTO15243 131 aa3.2□□□□□ -1.9
GPNMB-208ENST00000470994 LGALS3P17931 250 aaKnown RBP3.2□□□□□ -1.9
GPNMB-208ENST00000470994 NPC2P61916 151 aa3.2□□□□□ -1.9
GPNMB-208ENST00000470994 JOSD1Q15040 202 aaPredicted RBP3.2□□□□□ -1.9
GPNMB-208ENST00000470994 NDUFA5Q16718 116 aa3.2□□□□□ -1.9
GPNMB-208ENST00000470994 C10orf91Q5T1B1 145 aa3.2□□□□□ -1.9
GPNMB-208ENST00000470994 HRCT1Q6UXD1 115 aa3.2□□□□□ -1.9
GPNMB-208ENST00000470994 Q8N377 158 aa3.2□□□□□ -1.9
GPNMB-208ENST00000470994 J3QQQ9 107 aa3.19□□□□□ -1.9
GPNMB-208ENST00000470994 SNAPINO95295 136 aa3.19□□□□□ -1.9
GPNMB-208ENST00000470994 HINT1P49773 126 aaPredicted RBP3.19□□□□□ -1.9
GPNMB-208ENST00000470994 HERVK_113P61574 105 aa3.19□□□□□ -1.9
GPNMB-208ENST00000470994 Q6ZRX8 168 aa3.19□□□□□ -1.9
GPNMB-208ENST00000470994 ST20-AS1Q8NBB2 130 aa3.19□□□□□ -1.9
GPNMB-208ENST00000470994 PMCHL2Q9BQD1 86 aa3.19□□□□□ -1.9
GPNMB-208ENST00000470994 Q9BRP9 147 aa3.19□□□□□ -1.9
GPNMB-208ENST00000470994 SPANXB1Q9NS25 103 aaPredicted RBP3.19□□□□□ -1.9
GPNMB-208ENST00000470994 TRAV23DV6A0A075B6W5 121 aa3.18□□□□□ -1.9
GPNMB-208ENST00000470994 TRBV10-2A0A0K0K1G8 114 aa3.18□□□□□ -1.9
GPNMB-208ENST00000470994 C9orf92A6NGG3 77 aa3.18□□□□□ -1.9
GPNMB-208ENST00000470994 ZNF73O43830 326 aaPredicted RBP3.18□□□□□ -1.9
GPNMB-208ENST00000470994 LEPROTL1O95214 131 aa3.18□□□□□ -1.9
GPNMB-208ENST00000470994 FABP4P15090 132 aa3.18□□□□□ -1.9
GPNMB-208ENST00000470994 TSPEAR-AS2P59090 65 aa3.18□□□□□ -1.9
GPNMB-208ENST00000470994 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
GPNMB-208ENST00000470994 PCOTHQ58A44 107 aa3.18□□□□□ -1.9
GPNMB-208ENST00000470994 SVBPQ8N300 66 aa3.18□□□□□ -1.9
GPNMB-208ENST00000470994 OR13C6PQ8NH95 151 aa3.18□□□□□ -1.9
GPNMB-208ENST00000470994 IGLV8-61A0A075B6I0 122 aa3.17□□□□□ -1.9
GPNMB-208ENST00000470994 DPM2O94777 84 aa3.17□□□□□ -1.9
GPNMB-208ENST00000470994 CRCT1Q9UGL9 99 aa3.17□□□□□ -1.9
GPNMB-208ENST00000470994 MUC17Q685J3 4493 aa3.17□□□□□ -1.9
GPNMB-208ENST00000470994 LOC107984156A0A0G2JMH3 177 aa3.16□□□□□ -1.9
GPNMB-208ENST00000470994 NDUFC2O95298 119 aa3.16□□□□□ -1.9
GPNMB-208ENST00000470994 IGLV6-57P01721 117 aa3.16□□□□□ -1.9
GPNMB-208ENST00000470994 IGKCP01834 107 aa3.16□□□□□ -1.9
GPNMB-208ENST00000470994 PLNP26678 52 aa3.16□□□□□ -1.9
GPNMB-208ENST00000470994 NMUP48645 174 aa3.16□□□□□ -1.9
GPNMB-208ENST00000470994 TAL2Q16559 108 aa3.16□□□□□ -1.9
GPNMB-208ENST00000470994 ARL17AQ8IVW1 177 aa3.16□□□□□ -1.9
GPNMB-208ENST00000470994 DEFB105AQ8NG35 78 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms