RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 SS18L2Q9UHA2 77 aa5.28□□□□□ -1.56
SMC4-212ENST00000470240 NF1P21359 2839 aa5.27□□□□□ -1.57
SMC4-212ENST00000470240 TLX1NBP0CAT3 122 aa5.27□□□□□ -1.57
SMC4-212ENST00000470240 TM2D3Q9BRN9 247 aa5.27□□□□□ -1.57
SMC4-212ENST00000470240 DHRS4-AS1Q9P1J3 65 aa5.27□□□□□ -1.57
SMC4-212ENST00000470240 NSD1Q96L73 2696 aaPredicted RBP5.26□□□□□ -1.57
SMC4-212ENST00000470240 USP17L23D6RBM5 183 aa5.26□□□□□ -1.57
SMC4-212ENST00000470240 PRYO14603 147 aa5.26□□□□□ -1.57
SMC4-212ENST00000470240 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
SMC4-212ENST00000470240 Q6ZRP5 223 aa5.26□□□□□ -1.57
SMC4-212ENST00000470240 SERP2Q8N6R1 65 aa5.26□□□□□ -1.57
SMC4-212ENST00000470240 FAM30AQ9NZY2 134 aa5.26□□□□□ -1.57
SMC4-212ENST00000470240 ANK3Q12955 4377 aaKnown RBP5.26□□□□□ -1.57
SMC4-212ENST00000470240 HECTD1Q9ULT8 2610 aa5.25□□□□□ -1.57
SMC4-212ENST00000470240 BCE1O60756 84 aa5.25□□□□□ -1.57
SMC4-212ENST00000470240 SMIM20Q8N5G0 67 aa5.25□□□□□ -1.57
SMC4-212ENST00000470240 UPK3BQ9BT76 320 aa5.25□□□□□ -1.57
SMC4-212ENST00000470240 KCNQ1DNQ9H478 68 aa5.25□□□□□ -1.57
SMC4-212ENST00000470240 PKIGQ9Y2B9 76 aa5.25□□□□□ -1.57
SMC4-212ENST00000470240 LINC00588Q9Y4M8 146 aa5.25□□□□□ -1.57
SMC4-212ENST00000470240 ZNF469Q96JG9 3925 aaPredicted RBP5.25□□□□□ -1.57
SMC4-212ENST00000470240 LOC107984640A0A0U1RRK4 108 aa5.24□□□□□ -1.57
SMC4-212ENST00000470240 ETDCA0A1B0GVM5 59 aa5.24□□□□□ -1.57
SMC4-212ENST00000470240 CXCL6P80162 114 aa5.24□□□□□ -1.57
SMC4-212ENST00000470240 HAMPP81172 84 aa5.24□□□□□ -1.57
SMC4-212ENST00000470240 IGLV5-37A0A075B6J1 123 aa5.23□□□□□ -1.57
SMC4-212ENST00000470240 TRBV7-4A0A0J9YYF1 115 aa5.23□□□□□ -1.57
SMC4-212ENST00000470240 CRYGAP11844 174 aa5.23□□□□□ -1.57
SMC4-212ENST00000470240 C14orf177Q52M58 125 aa5.23□□□□□ -1.57
SMC4-212ENST00000470240 Q6ZVQ6 151 aa5.23□□□□□ -1.57
SMC4-212ENST00000470240 UBE2DNLQ8IWF7 75 aa5.23□□□□□ -1.57
SMC4-212ENST00000470240 C7orf33Q8WU49 177 aa5.23□□□□□ -1.57
SMC4-212ENST00000470240 AKAP9Q99996 3911 aa5.23□□□□□ -1.57
SMC4-212ENST00000470240 GCN1Q92616 2671 aaKnown RBP5.23□□□□□ -1.57
SMC4-212ENST00000470240 A0A087WVE0 104 aa5.22□□□□□ -1.57
SMC4-212ENST00000470240 PSCAO43653 123 aa5.22□□□□□ -1.57
SMC4-212ENST00000470240 FUSP35637 526 aaKnown RBP eCLIP5.22□□□□□ -1.57
SMC4-212ENST00000470240 TEP1Q99973 2627 aaKnown RBP5.22□□□□□ -1.57
SMC4-212ENST00000470240 A0A1B0GW54 56 aa5.21□□□□□ -1.58
SMC4-212ENST00000470240 K7EIL1 84 aa5.21□□□□□ -1.58
SMC4-212ENST00000470240 LINC01547P58512 204 aaPredicted RBP5.21□□□□□ -1.58
SMC4-212ENST00000470240 F8P00451 2351 aa5.2□□□□□ -1.58
SMC4-212ENST00000470240 Q6ZRX8 168 aa5.2□□□□□ -1.58
SMC4-212ENST00000470240 ATRQ13535 2644 aa5.2□□□□□ -1.58
SMC4-212ENST00000470240 F8WEM9 126 aa5.19□□□□□ -1.58
SMC4-212ENST00000470240 PRB2P02812 416 aaPredicted RBP5.19□□□□□ -1.58
SMC4-212ENST00000470240 TMEM258P61165 79 aa5.19□□□□□ -1.58
SMC4-212ENST00000470240 NREPQ16612 68 aa5.19□□□□□ -1.58
SMC4-212ENST00000470240 SERTAD4-AS1Q5TG53 156 aa5.19□□□□□ -1.58
SMC4-212ENST00000470240 FAM19A1Q7Z5A9 133 aa5.19□□□□□ -1.58
SMC4-212ENST00000470240 MRPL55Q7Z7F7 128 aaKnown RBP5.19□□□□□ -1.58
SMC4-212ENST00000470240 DEFB105AQ8NG35 78 aa5.19□□□□□ -1.58
SMC4-212ENST00000470240 IGLV1-50A0A075B6I6 118 aa5.18□□□□□ -1.58
SMC4-212ENST00000470240 FAM19A5Q7Z5A7 132 aaPredicted RBP5.18□□□□□ -1.58
SMC4-212ENST00000470240 LINC00476Q8WZB0 136 aa5.18□□□□□ -1.58
SMC4-212ENST00000470240 HIVEP1P15822 2718 aa5.17□□□□□ -1.58
SMC4-212ENST00000470240 TRAV7A0A075B6U4 112 aa5.17□□□□□ -1.58
SMC4-212ENST00000470240 NBPF19A0A087WUL8 3843 aa5.17□□□□□ -1.58
SMC4-212ENST00000470240 RPL37AP8A6NKH3 93 aa5.17□□□□□ -1.58
SMC4-212ENST00000470240 SPRR1AP35321 89 aa5.17□□□□□ -1.58
SMC4-212ENST00000470240 UBE2BP63146 152 aa5.17□□□□□ -1.58
SMC4-212ENST00000470240 REG3GQ6UW15 175 aa5.17□□□□□ -1.58
SMC4-212ENST00000470240 OTOGQ6ZRI0 2925 aa5.17□□□□□ -1.58
SMC4-212ENST00000470240 J3KT08 172 aa5.16□□□□□ -1.58
SMC4-212ENST00000470240 IGLV5-48A0A075B6I7 105 aa5.15□□□□□ -1.59
SMC4-212ENST00000470240 C16orf90A8MZG2 172 aa5.15□□□□□ -1.59
SMC4-212ENST00000470240 BPY2O14599 106 aa5.15□□□□□ -1.59
SMC4-212ENST00000470240 CNBPP62633 177 aaKnown RBP5.15□□□□□ -1.59
SMC4-212ENST00000470240 CUBNO60494 3623 aa5.14□□□□□ -1.59
SMC4-212ENST00000470240 NBEAL2Q6ZNJ1 2754 aa5.14□□□□□ -1.59
SMC4-212ENST00000470240 NUPR2A6NF83 97 aa5.14□□□□□ -1.59
SMC4-212ENST00000470240 M0R2N4 97 aa5.14□□□□□ -1.59
SMC4-212ENST00000470240 CASC10Q5T4H9 136 aa5.14□□□□□ -1.59
SMC4-212ENST00000470240 Q8N377 158 aa5.14□□□□□ -1.59
SMC4-212ENST00000470240 FAM168BA1KXE4 195 aa5.13□□□□□ -1.59
SMC4-212ENST00000470240 C1orf137Q5JT78 98 aa5.13□□□□□ -1.59
SMC4-212ENST00000470240 B9D2Q9BPU9 175 aa5.13□□□□□ -1.59
SMC4-212ENST00000470240 LINC00474Q9P2X8 69 aa5.13□□□□□ -1.59
SMC4-212ENST00000470240 KRTAP4-16G5E9R7 235 aaPredicted RBP5.12□□□□□ -1.59
SMC4-212ENST00000470240 C3orf84H3BNL1 204 aa5.12□□□□□ -1.59
SMC4-212ENST00000470240 C20orf197Q8N268 126 aa5.12□□□□□ -1.59
SMC4-212ENST00000470240 Q8NBF4 154 aa5.12□□□□□ -1.59
SMC4-212ENST00000470240 IGKV2-24A0A0C4DH68 120 aa5.11□□□□□ -1.59
SMC4-212ENST00000470240 NDUFC1O43677 76 aa5.11□□□□□ -1.59
SMC4-212ENST00000470240 RPS28P62857 69 aaKnown RBP5.11□□□□□ -1.59
SMC4-212ENST00000470240 SCXQ7RTU7 201 aa5.11□□□□□ -1.59
SMC4-212ENST00000470240 Q9BRP9 147 aa5.11□□□□□ -1.59
SMC4-212ENST00000470240 APLNQ9ULZ1 77 aa5.11□□□□□ -1.59
SMC4-212ENST00000470240 A0A096LNI7 61 aa5.1□□□□□ -1.59
SMC4-212ENST00000470240 NIPBLQ6KC79 2804 aaeCLIP5.1□□□□□ -1.598e-8■■■■■ 47
SMC4-212ENST00000470240 VWFP04275 2813 aa5.09□□□□□ -1.59
SMC4-212ENST00000470240 TENM1Q9UKZ4 2725 aa5.09□□□□□ -1.59
SMC4-212ENST00000470240 ERC2-IT1O76042 136 aa5.09□□□□□ -1.59
SMC4-212ENST00000470240 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.08□□□□□ -1.6
SMC4-212ENST00000470240 FAM236DA0A1B0GTK5 79 aa5.08□□□□□ -1.6
SMC4-212ENST00000470240 FAM236CP0DP71 79 aa5.08□□□□□ -1.6
SMC4-212ENST00000470240 UBE2AP49459 152 aa5.08□□□□□ -1.6
SMC4-212ENST00000470240 ATP5EP56381 51 aaPredicted RBP5.08□□□□□ -1.6
SMC4-212ENST00000470240 ST20-AS1Q8NBB2 130 aa5.08□□□□□ -1.6
SMC4-212ENST00000470240 SPRR4Q96PI1 79 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms