RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 CBY1Q9Y3M2 126 aa6.25□□□□□ -1.41
COL4A3-204ENST00000469504 B5MCH6 92 aa6.24□□□□□ -1.41
COL4A3-204ENST00000469504 NDUFC2O95298 119 aa6.24□□□□□ -1.41
COL4A3-204ENST00000469504 JOSD1Q15040 202 aaPredicted RBP6.24□□□□□ -1.41
COL4A3-204ENST00000469504 C21orf62-AS1Q17RA5 79 aa6.24□□□□□ -1.41
COL4A3-204ENST00000469504 ANKRD39Q53RE8 183 aa6.24□□□□□ -1.41
COL4A3-204ENST00000469504 H0Y8G0 127 aa6.23□□□□□ -1.41
COL4A3-204ENST00000469504 J3QQQ9 107 aa6.23□□□□□ -1.41
COL4A3-204ENST00000469504 DPM2O94777 84 aa6.23□□□□□ -1.41
COL4A3-204ENST00000469504 TRGC2P03986 189 aa6.23□□□□□ -1.41
COL4A3-204ENST00000469504 Q6ZRX8 168 aa6.23□□□□□ -1.41
COL4A3-204ENST00000469504 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
COL4A3-204ENST00000469504 C5orf52A6NGY3 159 aa6.22□□□□□ -1.41
COL4A3-204ENST00000469504 SERF1AO75920 110 aa6.22□□□□□ -1.41
COL4A3-204ENST00000469504 LGALS3P17931 250 aaKnown RBP6.22□□□□□ -1.41
COL4A3-204ENST00000469504 GAGE2AQ6NT46 116 aa6.22□□□□□ -1.41
COL4A3-204ENST00000469504 DAND5Q8N907 189 aa6.22□□□□□ -1.41
COL4A3-204ENST00000469504 FAT4Q6V0I7 4981 aa6.22□□□□□ -1.41
COL4A3-204ENST00000469504 IGLV6-57P01721 117 aa6.21□□□□□ -1.42
COL4A3-204ENST00000469504 IGKCP01834 107 aa6.21□□□□□ -1.42
COL4A3-204ENST00000469504 TSPEAR-AS2P59090 65 aa6.21□□□□□ -1.42
COL4A3-204ENST00000469504 KRTAP13-3Q3SY46 172 aa6.21□□□□□ -1.42
COL4A3-204ENST00000469504 S100A7L2Q5SY68 101 aa6.21□□□□□ -1.42
COL4A3-204ENST00000469504 TRAV23DV6A0A075B6W5 121 aa6.19□□□□□ -1.42
COL4A3-204ENST00000469504 SLC25A20O43772 301 aa6.19□□□□□ -1.42
COL4A3-204ENST00000469504 HINT1P49773 126 aaPredicted RBP6.19□□□□□ -1.42
COL4A3-204ENST00000469504 LINC00310P59036 64 aa6.19□□□□□ -1.42
COL4A3-204ENST00000469504 MOBPQ13875 183 aa6.19□□□□□ -1.42
COL4A3-204ENST00000469504 ASB16-AS1Q495Z4 193 aa6.19□□□□□ -1.42
COL4A3-204ENST00000469504 Q9BRP9 147 aa6.19□□□□□ -1.42
COL4A3-204ENST00000469504 IGLV9-49A0A0B4J1Y8 123 aa6.18□□□□□ -1.42
COL4A3-204ENST00000469504 SEC61BP60468 96 aaKnown RBP6.18□□□□□ -1.42
COL4A3-204ENST00000469504 LCE4AQ5TA78 99 aa6.18□□□□□ -1.42
COL4A3-204ENST00000469504 E9PLD3 99 aa6.17□□□□□ -1.42
COL4A3-204ENST00000469504 ZNF73O43830 326 aaPredicted RBP6.17□□□□□ -1.42
COL4A3-204ENST00000469504 ERC2-IT1O76042 136 aa6.17□□□□□ -1.42
COL4A3-204ENST00000469504 FABP4P15090 132 aa6.17□□□□□ -1.42
COL4A3-204ENST00000469504 Q8N377 158 aa6.17□□□□□ -1.42
COL4A3-204ENST00000469504 A0A0J9YXY3 114 aa6.16□□□□□ -1.42
COL4A3-204ENST00000469504 SLC25A34Q6PIV7 304 aa6.16□□□□□ -1.42
COL4A3-204ENST00000469504 SPANXCQ9NY87 97 aa6.15□□□□□ -1.42
COL4A3-204ENST00000469504 TIMM17BO60830 172 aa6.14□□□□□ -1.43
COL4A3-204ENST00000469504 C9orf153Q5TBE3 101 aa6.14□□□□□ -1.43
COL4A3-204ENST00000469504 PMCHL2Q9BQD1 86 aa6.14□□□□□ -1.43
COL4A3-204ENST00000469504 COLCA2A8K830 154 aa6.13□□□□□ -1.43
COL4A3-204ENST00000469504 SOSTDC1Q6X4U4 206 aa6.13□□□□□ -1.43
COL4A3-204ENST00000469504 DHRS4-AS1Q9P1J3 65 aa6.13□□□□□ -1.43
COL4A3-204ENST00000469504 SYS1-DBNDD2H3BUS1 97 aa6.12□□□□□ -1.43
COL4A3-204ENST00000469504 SPRR1BP22528 89 aa6.12□□□□□ -1.43
COL4A3-204ENST00000469504 ADAMTSL4-AS1Q5T5F5 129 aa6.12□□□□□ -1.43
COL4A3-204ENST00000469504 LIMD2Q9BT23 127 aa6.12□□□□□ -1.43
COL4A3-204ENST00000469504 SPANXDQ9BXN6 97 aa6.12□□□□□ -1.43
COL4A3-204ENST00000469504 LINC01547P58512 204 aaPredicted RBP6.11□□□□□ -1.43
COL4A3-204ENST00000469504 NPC2P61916 151 aa6.11□□□□□ -1.43
COL4A3-204ENST00000469504 LINC00518Q8N0U6 118 aa6.11□□□□□ -1.43
COL4A3-204ENST00000469504 LINC00308Q8TCZ7 52 aa6.11□□□□□ -1.43
COL4A3-204ENST00000469504 LINC01545Q5VT33 79 aa6.1□□□□□ -1.43
COL4A3-204ENST00000469504 PET117Q6UWS5 81 aa6.1□□□□□ -1.43
COL4A3-204ENST00000469504 LITAFQ99732 161 aa6.1□□□□□ -1.43
COL4A3-204ENST00000469504 LAMTOR3Q9UHA4 124 aa6.1□□□□□ -1.43
COL4A3-204ENST00000469504 SLC7A5P1Q8MH63 180 aa6.09□□□□□ -1.43
COL4A3-204ENST00000469504 OR13C6PQ8NH95 151 aa6.09□□□□□ -1.43
COL4A3-204ENST00000469504 COPS9Q8WXC6 57 aa6.09□□□□□ -1.43
COL4A3-204ENST00000469504 ELOF1P60002 83 aaKnown RBP6.08□□□□□ -1.44
COL4A3-204ENST00000469504 ST20-AS1Q8NBB2 130 aa6.08□□□□□ -1.44
COL4A3-204ENST00000469504 TRBV7-6A0A0J9YX20 115 aa6.07□□□□□ -1.44
COL4A3-204ENST00000469504 ZNF815PA8K554 130 aa6.07□□□□□ -1.44
COL4A3-204ENST00000469504 HIST1H2BKO60814 126 aa6.07□□□□□ -1.44
COL4A3-204ENST00000469504 HIST1H2BJP06899 126 aa6.07□□□□□ -1.44
COL4A3-204ENST00000469504 HIST1H2BOP23527 126 aa6.07□□□□□ -1.44
COL4A3-204ENST00000469504 HIST1H2BBP33778 126 aa6.07□□□□□ -1.44
COL4A3-204ENST00000469504 HIST1H2BDP58876 126 aa6.07□□□□□ -1.44
COL4A3-204ENST00000469504 HIST1H2BCP62807 126 aa6.07□□□□□ -1.44
COL4A3-204ENST00000469504 CD164Q04900 197 aa6.07□□□□□ -1.44
COL4A3-204ENST00000469504 HIST2H2BEQ16778 126 aa6.07□□□□□ -1.44
COL4A3-204ENST00000469504 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.07□□□□□ -1.44
COL4A3-204ENST00000469504 HIST1H2BHQ93079 126 aa6.07□□□□□ -1.44
COL4A3-204ENST00000469504 HIST1H2BNQ99877 126 aa6.07□□□□□ -1.44
COL4A3-204ENST00000469504 HIST1H2BMQ99879 126 aa6.07□□□□□ -1.44
COL4A3-204ENST00000469504 KRTAP4-2Q9BYR5 136 aa6.07□□□□□ -1.44
COL4A3-204ENST00000469504 COX7BP24311 80 aa6.06□□□□□ -1.44
COL4A3-204ENST00000469504 AKR1D1P51857 326 aa6.05□□□□□ -1.44
COL4A3-204ENST00000469504 Q6ZVH6 145 aa6.05□□□□□ -1.44
COL4A3-204ENST00000469504 TEX49A0A1B0GTD5 131 aa6.04□□□□□ -1.44
COL4A3-204ENST00000469504 IFITM1P13164 125 aa6.04□□□□□ -1.44
COL4A3-204ENST00000469504 C6orf99Q4VX62 202 aa6.04□□□□□ -1.44
COL4A3-204ENST00000469504 PRO1933Q9H354 126 aa6.04□□□□□ -1.44
COL4A3-204ENST00000469504 A0A1B0GWB2 263 aa6.03□□□□□ -1.44
COL4A3-204ENST00000469504 C20orf202A1L168 122 aa6.03□□□□□ -1.44
COL4A3-204ENST00000469504 KRTAP9-7A8MTY7 169 aa6.03□□□□□ -1.44
COL4A3-204ENST00000469504 TAL2Q16559 108 aa6.03□□□□□ -1.44
COL4A3-204ENST00000469504 Q5XG85 94 aa6.03□□□□□ -1.44
COL4A3-204ENST00000469504 SCGB1D4Q6XE38 83 aa6.03□□□□□ -1.44
COL4A3-204ENST00000469504 KRTAP4-1Q9BYQ7 146 aa6.03□□□□□ -1.44
COL4A3-204ENST00000469504 A4D1N5 150 aa6.02□□□□□ -1.45
COL4A3-204ENST00000469504 C3orf79P0CE67 100 aa6.01□□□□□ -1.45
COL4A3-204ENST00000469504 COA6Q5JTJ3 125 aaKnown RBP6.01□□□□□ -1.45
COL4A3-204ENST00000469504 NHP2Q9NX24 153 aaKnown RBP6.01□□□□□ -1.45
COL4A3-204ENST00000469504 H7C2G1 150 aa6□□□□□ -1.45
COL4A3-204ENST00000469504 S100A1P23297 94 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms