RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 SYS1-DBNDD2H3BUS1 97 aa12.34□□□□□ -0.43
TTC28-204ENST00000468807 ZNF73O43830 326 aaPredicted RBP12.33□□□□□ -0.44
TTC28-204ENST00000468807 C9orf153Q5TBE3 101 aa12.31□□□□□ -0.44
TTC28-204ENST00000468807 SSBP3-AS1Q7Z2R9 100 aa12.31□□□□□ -0.44
TTC28-204ENST00000468807 HIST1H2BKO60814 126 aa12.3□□□□□ -0.44
TTC28-204ENST00000468807 HIST1H2BJP06899 126 aa12.3□□□□□ -0.44
TTC28-204ENST00000468807 HIST1H2BOP23527 126 aa12.3□□□□□ -0.44
TTC28-204ENST00000468807 HIST1H2BBP33778 126 aa12.3□□□□□ -0.44
TTC28-204ENST00000468807 HINT1P49773 126 aaPredicted RBP12.3□□□□□ -0.44
TTC28-204ENST00000468807 HIST1H2BDP58876 126 aa12.3□□□□□ -0.44
TTC28-204ENST00000468807 HIST1H2BCP62807 126 aa12.3□□□□□ -0.44
TTC28-204ENST00000468807 HIST2H2BEQ16778 126 aa12.3□□□□□ -0.44
TTC28-204ENST00000468807 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.3□□□□□ -0.44
TTC28-204ENST00000468807 OR13C6PQ8NH95 151 aa12.3□□□□□ -0.44
TTC28-204ENST00000468807 HIST1H2BHQ93079 126 aa12.3□□□□□ -0.44
TTC28-204ENST00000468807 HIST1H2BNQ99877 126 aa12.3□□□□□ -0.44
TTC28-204ENST00000468807 HIST1H2BMQ99879 126 aa12.3□□□□□ -0.44
TTC28-204ENST00000468807 KRTAP13-3Q3SY46 172 aa12.28□□□□□ -0.44
TTC28-204ENST00000468807 ST20-AS1Q8NBB2 130 aa12.28□□□□□ -0.44
TTC28-204ENST00000468807 CBY1Q9Y3M2 126 aa12.28□□□□□ -0.44
TTC28-204ENST00000468807 LINC00308Q8TCZ7 52 aa12.27□□□□□ -0.45
TTC28-204ENST00000468807 SPANXCQ9NY87 97 aa12.27□□□□□ -0.45
TTC28-204ENST00000468807 ZNF815PA8K554 130 aa12.26□□□□□ -0.45
TTC28-204ENST00000468807 LINC01545Q5VT33 79 aa12.25□□□□□ -0.45
TTC28-204ENST00000468807 PET117Q6UWS5 81 aa12.25□□□□□ -0.45
TTC28-204ENST00000468807 Q8N377 158 aa12.25□□□□□ -0.45
TTC28-204ENST00000468807 LITAFQ99732 161 aa12.25□□□□□ -0.45
TTC28-204ENST00000468807 SLC25A20O43772 301 aa12.23□□□□□ -0.45
TTC28-204ENST00000468807 TIMM17BO60830 172 aa12.23□□□□□ -0.45
TTC28-204ENST00000468807 RPS29P62273 56 aaKnown RBP12.23□□□□□ -0.45
TTC28-204ENST00000468807 TTTY13Q9BZ97 58 aa12.23□□□□□ -0.45
TTC28-204ENST00000468807 LCE2AQ5TA79 106 aaPredicted RBP12.2□□□□□ -0.46
TTC28-204ENST00000468807 C3orf79P0CE67 100 aa12.19□□□□□ -0.46
TTC28-204ENST00000468807 KRTDAPP60985 99 aa12.19□□□□□ -0.46
TTC28-204ENST00000468807 SPANXDQ9BXN6 97 aa12.19□□□□□ -0.46
TTC28-204ENST00000468807 C5orf52A6NGY3 159 aa12.17□□□□□ -0.46
TTC28-204ENST00000468807 DHRS4-AS1Q9P1J3 65 aa12.17□□□□□ -0.46
TTC28-204ENST00000468807 ASB16-AS1Q495Z4 193 aa12.15□□□□□ -0.46
TTC28-204ENST00000468807 SLC25A34Q6PIV7 304 aa12.15□□□□□ -0.46
TTC28-204ENST00000468807 SCGB1D4Q6XE38 83 aa12.15□□□□□ -0.46
TTC28-204ENST00000468807 LINC00518Q8N0U6 118 aa12.15□□□□□ -0.46
TTC28-204ENST00000468807 COX7BP24311 80 aa12.14□□□□□ -0.47
TTC28-204ENST00000468807 C6orf99Q4VX62 202 aa12.14□□□□□ -0.47
TTC28-204ENST00000468807 HRCT1Q6UXD1 115 aa12.14□□□□□ -0.47
TTC28-204ENST00000468807 SEC61BP60468 96 aaKnown RBP12.13□□□□□ -0.47
TTC28-204ENST00000468807 C20orf202A1L168 122 aa12.12□□□□□ -0.47
TTC28-204ENST00000468807 SPRR1BP22528 89 aa12.11□□□□□ -0.47
TTC28-204ENST00000468807 ELOF1P60002 83 aaKnown RBP12.11□□□□□ -0.47
TTC28-204ENST00000468807 DEFB105AQ8NG35 78 aa12.11□□□□□ -0.47
TTC28-204ENST00000468807 LAMTOR3Q9UHA4 124 aa12.11□□□□□ -0.47
TTC28-204ENST00000468807 TAL2Q16559 108 aa12.09□□□□□ -0.47
TTC28-204ENST00000468807 ATOH7Q8N100 152 aa12.09□□□□□ -0.47
TTC28-204ENST00000468807 KRTAP9-2Q9BYQ4 174 aa12.09□□□□□ -0.47
TTC28-204ENST00000468807 ANKRD39Q53RE8 183 aa12.08□□□□□ -0.48
TTC28-204ENST00000468807 COA6Q5JTJ3 125 aaKnown RBP12.08□□□□□ -0.48
TTC28-204ENST00000468807 LIMD2Q9BT23 127 aa12.08□□□□□ -0.48
TTC28-204ENST00000468807 Q1RN00 199 aa12.07□□□□□ -0.48
TTC28-204ENST00000468807 COPS9Q8WXC6 57 aa12.07□□□□□ -0.48
TTC28-204ENST00000468807 A6NDN8 102 aa12.06□□□□□ -0.48
TTC28-204ENST00000468807 XP32Q5T750 250 aa12.04□□□□□ -0.48
TTC28-204ENST00000468807 KRTAP4-1Q9BYQ7 146 aa12.04□□□□□ -0.48
TTC28-204ENST00000468807 IFITM1P13164 125 aa12.03□□□□□ -0.48
TTC28-204ENST00000468807 TEX49A0A1B0GTD5 131 aa12.02□□□□□ -0.49
TTC28-204ENST00000468807 PCP2Q8IVA1 136 aa12.01□□□□□ -0.49
TTC28-204ENST00000468807 MUSTN1Q8IVN3 82 aa12.01□□□□□ -0.49
TTC28-204ENST00000468807 TRBV7-6A0A0J9YX20 115 aa12□□□□□ -0.49
TTC28-204ENST00000468807 A0A1B0GWB2 263 aa12□□□□□ -0.49
TTC28-204ENST00000468807 LINC01547P58512 204 aaPredicted RBP12□□□□□ -0.49
TTC28-204ENST00000468807 Q6ZVH6 145 aa11.99□□□□□ -0.49
TTC28-204ENST00000468807 PRO1933Q9H354 126 aa11.99□□□□□ -0.49
TTC28-204ENST00000468807 C9orf92A6NGG3 77 aa11.97□□□□□ -0.49
TTC28-204ENST00000468807 H7C2G1 150 aa11.97□□□□□ -0.49
TTC28-204ENST00000468807 AKR1D1P51857 326 aa11.97□□□□□ -0.49
TTC28-204ENST00000468807 TRAV13-2A0A0B4J235 113 aa11.94□□□□□ -0.5
TTC28-204ENST00000468807 CD164Q04900 197 aa11.93□□□□□ -0.5
TTC28-204ENST00000468807 SMIM29Q86T20 159 aa11.93□□□□□ -0.5
TTC28-204ENST00000468807 SMIM11BQ8TCY0 68 aa11.92□□□□□ -0.5
TTC28-204ENST00000468807 IGLV5-48A0A075B6I7 105 aa11.91□□□□□ -0.5
TTC28-204ENST00000468807 A0A0G2JQZ4 141 aa11.91□□□□□ -0.5
TTC28-204ENST00000468807 A4D1N5 150 aa11.91□□□□□ -0.5
TTC28-204ENST00000468807 NHP2Q9NX24 153 aaKnown RBP11.91□□□□□ -0.5
TTC28-204ENST00000468807 SNRPEP62304 92 aaKnown RBP11.9□□□□□ -0.5
TTC28-204ENST00000468807 S100A2P29034 98 aa11.88□□□□□ -0.51
TTC28-204ENST00000468807 PCOTHQ58A44 107 aa11.87□□□□□ -0.51
TTC28-204ENST00000468807 HSBP1L1C9JCN9 74 aa11.86□□□□□ -0.51
TTC28-204ENST00000468807 IGLV8-61A0A075B6I0 122 aa11.84□□□□□ -0.51
TTC28-204ENST00000468807 VAMP3Q15836 100 aa11.84□□□□□ -0.51
TTC28-204ENST00000468807 HIST3H2BBQ8N257 126 aa11.84□□□□□ -0.51
TTC28-204ENST00000468807 HIST1H2BLQ99880 126 aa11.84□□□□□ -0.51
TTC28-204ENST00000468807 F8WEM9 126 aa11.82□□□□□ -0.52
TTC28-204ENST00000468807 C1orf195Q5TG92 126 aa11.82□□□□□ -0.52
TTC28-204ENST00000468807 Q5XG85 94 aa11.82□□□□□ -0.52
TTC28-204ENST00000468807 S100A6P06703 90 aa11.77□□□□□ -0.53
TTC28-204ENST00000468807 LINC00575Q6W349 94 aa11.77□□□□□ -0.53
TTC28-204ENST00000468807 hADV29S1A0JD25 119 aa11.76□□□□□ -0.53
TTC28-204ENST00000468807 TCL1BO95988 128 aa11.76□□□□□ -0.53
TTC28-204ENST00000468807 Q6ZQY7 126 aa11.76□□□□□ -0.53
TTC28-204ENST00000468807 C12orf57Q99622 126 aa11.75□□□□□ -0.53
TTC28-204ENST00000468807 KRTAP9-6A0A140TA67 174 aa11.73□□□□□ -0.53
TTC28-204ENST00000468807 LCE2CQ5TA81 110 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms