RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.61□□□□□ -2.15
CDHR3-206ENST00000468477 LINC01546A6NGU7 62 aa1.6□□□□□ -2.15
CDHR3-206ENST00000468477 H0YGX0 51 aa1.6□□□□□ -2.15
CDHR3-206ENST00000468477 FXYD6P3P58550 94 aa1.6□□□□□ -2.15
CDHR3-206ENST00000468477 FAM208BQ5VWN6 2430 aa1.6□□□□□ -2.15
CDHR3-206ENST00000468477 CNTRLQ7Z7A1 2325 aa1.6□□□□□ -2.15
CDHR3-206ENST00000468477 NDUFA3O95167 84 aa1.59□□□□□ -2.15
CDHR3-206ENST00000468477 CRIP1P50238 77 aa1.59□□□□□ -2.15
CDHR3-206ENST00000468477 USMG5Q96IX5 58 aa1.59□□□□□ -2.15
CDHR3-206ENST00000468477 TP53AIP1Q9HCN2 124 aa1.59□□□□□ -2.15
CDHR3-206ENST00000468477 MROH2BQ7Z745 1585 aa1.59□□□□□ -2.16
CDHR3-206ENST00000468477 PIGYQ3MUY2 71 aa1.58□□□□□ -2.16
CDHR3-206ENST00000468477 SAMD9LQ8IVG5 1584 aa1.57□□□□□ -2.16
CDHR3-206ENST00000468477 I3L2K1 104 aa1.57□□□□□ -2.16
CDHR3-206ENST00000468477 K7EIL1 84 aa1.57□□□□□ -2.16
CDHR3-206ENST00000468477 CDKN2A-AS1Q9UH64 79 aa1.57□□□□□ -2.16
CDHR3-206ENST00000468477 COL6A6A6NMZ7 2263 aa1.56□□□□□ -2.16
CDHR3-206ENST00000468477 LMO7Q8WWI1 1683 aa1.56□□□□□ -2.16
CDHR3-206ENST00000468477 K7EQZ3 153 aa1.56□□□□□ -2.16
CDHR3-206ENST00000468477 MRPL34Q9BQ48 92 aaKnown RBP1.56□□□□□ -2.16
CDHR3-206ENST00000468477 OTOGLQ3ZCN5 2332 aa1.56□□□□□ -2.16
CDHR3-206ENST00000468477 PLCE1Q9P212 2302 aa1.55□□□□□ -2.16
CDHR3-206ENST00000468477 LYNX1P0DP58 116 aa1.55□□□□□ -2.16
CDHR3-206ENST00000468477 LINC00158P58513 81 aa1.55□□□□□ -2.16
CDHR3-206ENST00000468477 KRTAP10-10P60014 251 aa1.55□□□□□ -2.16
CDHR3-206ENST00000468477 BPTFQ12830 3046 aa1.54□□□□□ -2.16
CDHR3-206ENST00000468477 Q8IZM0 81 aa1.54□□□□□ -2.16
CDHR3-206ENST00000468477 DEFB123Q8N688 67 aa1.54□□□□□ -2.16
CDHR3-206ENST00000468477 DEFB119Q8N690 84 aa1.54□□□□□ -2.16
CDHR3-206ENST00000468477 SORL1Q92673 2214 aa1.54□□□□□ -2.16
CDHR3-206ENST00000468477 SNRPGP62308 76 aaKnown RBP1.53□□□□□ -2.16
CDHR3-206ENST00000468477 PRO3102Q9H379 93 aa1.53□□□□□ -2.16
CDHR3-206ENST00000468477 LOC730098B7Z3J9 87 aa1.52□□□□□ -2.17
CDHR3-206ENST00000468477 CCL22O00626 93 aa1.52□□□□□ -2.17
CDHR3-206ENST00000468477 CNFNQ9BYD5 112 aa1.52□□□□□ -2.17
CDHR3-206ENST00000468477 LCE3DQ9BYE3 92 aa1.52□□□□□ -2.17
CDHR3-206ENST00000468477 TMEM167BQ9NRX6 74 aa1.52□□□□□ -2.17
CDHR3-206ENST00000468477 PRO0255Q9UI72 69 aa1.52□□□□□ -2.17
CDHR3-206ENST00000468477 DUOX1Q9NRD9 1551 aa1.51□□□□□ -2.17
CDHR3-206ENST00000468477 COX6B2Q6YFQ2 88 aa1.51□□□□□ -2.17
CDHR3-206ENST00000468477 LINC00308Q8TCZ7 52 aa1.51□□□□□ -2.17
CDHR3-206ENST00000468477 COX6A2Q02221 97 aa1.5□□□□□ -2.17
CDHR3-206ENST00000468477 PRB3Q04118 309 aaPredicted RBP1.5□□□□□ -2.17
CDHR3-206ENST00000468477 KRTAP6-3Q3LI67 103 aa1.5□□□□□ -2.17
CDHR3-206ENST00000468477 GCC2Q8IWJ2 1684 aa1.5□□□□□ -2.17
CDHR3-206ENST00000468477 PIEZO2Q9H5I5 2752 aa1.5□□□□□ -2.17
CDHR3-206ENST00000468477 C10orf95Q9H7T3 257 aa1.49□□□□□ -2.17
CDHR3-206ENST00000468477 TRIOBPQ9H2D6 2365 aa1.48□□□□□ -2.17
CDHR3-206ENST00000468477 PTPRZ1P23471 2315 aaPredicted RBP1.48□□□□□ -2.17
CDHR3-206ENST00000468477 KRTAP13-1Q8IUC0 172 aa1.48□□□□□ -2.17
CDHR3-206ENST00000468477 PTPRQQ9UMZ3 2332 aa1.48□□□□□ -2.17
CDHR3-206ENST00000468477 FBN1P35555 2871 aaKnown RBP1.47□□□□□ -2.17
CDHR3-206ENST00000468477 LYNX1G3V0Z9 82 aa1.47□□□□□ -2.17
CDHR3-206ENST00000468477 TFF3Q07654 80 aa1.47□□□□□ -2.17
CDHR3-206ENST00000468477 SPINK9Q5DT21 86 aa1.47□□□□□ -2.17
CDHR3-206ENST00000468477 MINOS1Q5TGZ0 78 aa1.47□□□□□ -2.17
CDHR3-206ENST00000468477 H0YAA0 97 aa1.46□□□□□ -2.18
CDHR3-206ENST00000468477 LELP1Q5T871 98 aa1.46□□□□□ -2.18
CDHR3-206ENST00000468477 USF3Q68DE3 2245 aa1.46□□□□□ -2.18
CDHR3-206ENST00000468477 ROS1P08922 2347 aa1.45□□□□□ -2.18
CDHR3-206ENST00000468477 KRTAP12-4P60329 112 aa1.45□□□□□ -2.18
CDHR3-206ENST00000468477 J3QKU1 62 aa1.44□□□□□ -2.18
CDHR3-206ENST00000468477 SMIM2Q9BVW6 85 aa1.44□□□□□ -2.18
CDHR3-206ENST00000468477 C6orf48Q9UBA6 75 aa1.44□□□□□ -2.18
CDHR3-206ENST00000468477 APLNQ9ULZ1 77 aa1.44□□□□□ -2.18
CDHR3-206ENST00000468477 C2CD3Q4AC94 2353 aa1.43□□□□□ -2.18
CDHR3-206ENST00000468477 SPRR1AP35321 89 aa1.42□□□□□ -2.18
CDHR3-206ENST00000468477 H1FX-AS1Q4G0G2 97 aa1.42□□□□□ -2.18
CDHR3-206ENST00000468477 Q6ZSA8 131 aa1.42□□□□□ -2.18
CDHR3-206ENST00000468477 RP1L1Q8IWN7 2480 aaPredicted RBP1.41□□□□□ -2.18
CDHR3-206ENST00000468477 IAPPP10997 89 aa1.41□□□□□ -2.18
CDHR3-206ENST00000468477 WFDC13Q8IUB5 93 aa1.41□□□□□ -2.18
CDHR3-206ENST00000468477 DEFB105AQ8NG35 78 aa1.41□□□□□ -2.18
CDHR3-206ENST00000468477 PKDREJQ9NTG1 2253 aa1.4□□□□□ -2.19
CDHR3-206ENST00000468477 NDUFA1O15239 70 aa1.4□□□□□ -2.19
CDHR3-206ENST00000468477 Q5VSD8 79 aa1.4□□□□□ -2.19
CDHR3-206ENST00000468477 CLTCL1P53675 1640 aa1.4□□□□□ -2.19
CDHR3-206ENST00000468477 ALMS1Q8TCU4 4167 aa1.4□□□□□ -2.19
CDHR3-206ENST00000468477 WNK2Q9Y3S1 2297 aa1.39□□□□□ -2.19
CDHR3-206ENST00000468477 ZNF462Q96JM2 2506 aa1.39□□□□□ -2.19
CDHR3-206ENST00000468477 SPTBN2O15020 2390 aa1.39□□□□□ -2.19
CDHR3-206ENST00000468477 A0A0D9SG42 100 aa1.38□□□□□ -2.19
CDHR3-206ENST00000468477 SPRR1BP22528 89 aa1.38□□□□□ -2.19
CDHR3-206ENST00000468477 DEFB130BP0DP73 79 aa1.37□□□□□ -2.19
CDHR3-206ENST00000468477 DEFB130AP0DP74 79 aa1.37□□□□□ -2.19
CDHR3-206ENST00000468477 SPTBN1Q01082 2364 aaKnown RBP1.37□□□□□ -2.19
CDHR3-206ENST00000468477 PDE4DIPQ5VU43 2346 aa1.37□□□□□ -2.19
CDHR3-206ENST00000468477 KNL1Q8NG31 2342 aa1.37□□□□□ -2.19
CDHR3-206ENST00000468477 RPS27P42677 84 aaKnown RBP1.36□□□□□ -2.19
CDHR3-206ENST00000468477 RPS27LQ71UM5 84 aaKnown RBP1.36□□□□□ -2.19
CDHR3-206ENST00000468477 CACNA1HO95180 2353 aa1.36□□□□□ -2.19
CDHR3-206ENST00000468477 MUC19Q7Z5P9 8384 aa1.36□□□□□ -2.19
CDHR3-206ENST00000468477 KLK9Q2XQG4 91 aa1.35□□□□□ -2.19
CDHR3-206ENST00000468477 ASH1LQ9NR48 2969 aaKnown RBP1.35□□□□□ -2.19
CDHR3-206ENST00000468477 IGF2RP11717 2491 aa1.34□□□□□ -2.19
CDHR3-206ENST00000468477 WFDC10BQ8IUB3 73 aa1.34□□□□□ -2.19
CDHR3-206ENST00000468477 HIVEP2P31629 2446 aa1.34□□□□□ -2.2
CDHR3-206ENST00000468477 KRTAP5-7Q6L8G8 165 aa1.33□□□□□ -2.2
CDHR3-206ENST00000468477 TPRP12270 2363 aaKnown RBP1.33□□□□□ -2.2
CDHR3-206ENST00000468477 KRTAP12-3P60328 96 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms