RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 TRAV23DV6A0A075B6W5 121 aa11.21□□□□□ -0.61
GMDS-203ENST00000467288 ERC2-IT1O76042 136 aa11.21□□□□□ -0.61
GMDS-203ENST00000467288 LINC00483Q53H64 154 aa11.21□□□□□ -0.61
GMDS-203ENST00000467288 Q9BRP9 147 aa11.21□□□□□ -0.61
GMDS-203ENST00000467288 TTTY13Q9BZ97 58 aa11.21□□□□□ -0.61
GMDS-203ENST00000467288 PPDPFQ9H3Y8 114 aa11.2□□□□□ -0.62
GMDS-203ENST00000467288 SPANXCQ9NY87 97 aa11.2□□□□□ -0.62
GMDS-203ENST00000467288 SPAG11AQ6PDA7 123 aa11.19□□□□□ -0.62
GMDS-203ENST00000467288 RETNLBQ9BQ08 111 aa11.19□□□□□ -0.62
GMDS-203ENST00000467288 C20orf202A1L168 122 aa11.18□□□□□ -0.62
GMDS-203ENST00000467288 ZNF73O43830 326 aaPredicted RBP11.17□□□□□ -0.62
GMDS-203ENST00000467288 GAGE2AQ6NT46 116 aa11.17□□□□□ -0.62
GMDS-203ENST00000467288 CBY1Q9Y3M2 126 aa11.16□□□□□ -0.62
GMDS-203ENST00000467288 JOSD1Q15040 202 aaPredicted RBP11.15□□□□□ -0.62
GMDS-203ENST00000467288 ANKRD39Q53RE8 183 aa11.15□□□□□ -0.62
GMDS-203ENST00000467288 Q8NBF4 154 aa11.14□□□□□ -0.63
GMDS-203ENST00000467288 AKR1D1P51857 326 aa11.12□□□□□ -0.63
GMDS-203ENST00000467288 C4orf48Q5BLP8 95 aa11.12□□□□□ -0.63
GMDS-203ENST00000467288 ATOH7Q8N100 152 aa11.12□□□□□ -0.63
GMDS-203ENST00000467288 OR13C6PQ8NH95 151 aa11.12□□□□□ -0.63
GMDS-203ENST00000467288 SPANXDQ9BXN6 97 aa11.12□□□□□ -0.63
GMDS-203ENST00000467288 HINT1P49773 126 aaPredicted RBP11.11□□□□□ -0.63
GMDS-203ENST00000467288 LINC00518Q8N0U6 118 aa11.11□□□□□ -0.63
GMDS-203ENST00000467288 S100A1P23297 94 aa11.1□□□□□ -0.63
GMDS-203ENST00000467288 SCGB1D4Q6XE38 83 aa11.1□□□□□ -0.63
GMDS-203ENST00000467288 IGLV7-46A0A075B6I9 117 aa11.09□□□□□ -0.63
GMDS-203ENST00000467288 SSBP3-AS1Q7Z2R9 100 aa11.09□□□□□ -0.63
GMDS-203ENST00000467288 C5orf52A6NGY3 159 aa11.08□□□□□ -0.64
GMDS-203ENST00000467288 SPINK1P00995 79 aa11.08□□□□□ -0.64
GMDS-203ENST00000467288 MOBPQ13875 183 aa11.08□□□□□ -0.64
GMDS-203ENST00000467288 TPRXLQ17RH7 258 aa11.08□□□□□ -0.64
GMDS-203ENST00000467288 HIST3H2BBQ8N257 126 aa11.08□□□□□ -0.64
GMDS-203ENST00000467288 IGLV9-49A0A0B4J1Y8 123 aa11.07□□□□□ -0.64
GMDS-203ENST00000467288 PCP2Q8IVA1 136 aa11.07□□□□□ -0.64
GMDS-203ENST00000467288 IFITM1P13164 125 aa11.06□□□□□ -0.64
GMDS-203ENST00000467288 SNRPEP62304 92 aaKnown RBP11.06□□□□□ -0.64
GMDS-203ENST00000467288 ST20-AS1Q8NBB2 130 aa11.06□□□□□ -0.64
GMDS-203ENST00000467288 Q6ZVH6 145 aa11.05□□□□□ -0.64
GMDS-203ENST00000467288 COPS9Q8WXC6 57 aa11.05□□□□□ -0.64
GMDS-203ENST00000467288 HIST1H2BLQ99880 126 aa11.05□□□□□ -0.64
GMDS-203ENST00000467288 A0A0U1RQV1 116 aa11.04□□□□□ -0.64
GMDS-203ENST00000467288 FP248Q71RG6 208 aaPredicted RBP11.04□□□□□ -0.64
GMDS-203ENST00000467288 S100A2P29034 98 aa11.03□□□□□ -0.64
GMDS-203ENST00000467288 DHRS4-AS1Q9P1J3 65 aa11.03□□□□□ -0.64
GMDS-203ENST00000467288 FAT4Q6V0I7 4981 aa11.03□□□□□ -0.64
GMDS-203ENST00000467288 SPRR1BP22528 89 aa11.02□□□□□ -0.65
GMDS-203ENST00000467288 ELOF1P60002 83 aaKnown RBP11.02□□□□□ -0.65
GMDS-203ENST00000467288 RPS29P62273 56 aaKnown RBP11.02□□□□□ -0.65
GMDS-203ENST00000467288 C6orf99Q4VX62 202 aa11.02□□□□□ -0.65
GMDS-203ENST00000467288 COX7BP24311 80 aa11.01□□□□□ -0.65
GMDS-203ENST00000467288 MUSTN1Q8IVN3 82 aa11.01□□□□□ -0.65
GMDS-203ENST00000467288 CDIP1Q9H305 208 aa11.01□□□□□ -0.65
GMDS-203ENST00000467288 KRTAP9-2Q9BYQ4 174 aa10.99□□□□□ -0.65
GMDS-203ENST00000467288 TRBV7-6A0A0J9YX20 115 aa10.98□□□□□ -0.65
GMDS-203ENST00000467288 C9orf153Q5TBE3 101 aa10.98□□□□□ -0.65
GMDS-203ENST00000467288 S100A6P06703 90 aa10.97□□□□□ -0.65
GMDS-203ENST00000467288 Q8N377 158 aa10.97□□□□□ -0.65
GMDS-203ENST00000467288 A6NDN8 102 aa10.95□□□□□ -0.66
GMDS-203ENST00000467288 SLC25A34Q6PIV7 304 aa10.95□□□□□ -0.66
GMDS-203ENST00000467288 A0A1B0GWB2 263 aa10.93□□□□□ -0.66
GMDS-203ENST00000467288 HSBP1L1C9JCN9 74 aa10.93□□□□□ -0.66
GMDS-203ENST00000467288 KRTAP13-3Q3SY46 172 aa10.93□□□□□ -0.66
GMDS-203ENST00000467288 LCE2AQ5TA79 106 aaPredicted RBP10.93□□□□□ -0.66
GMDS-203ENST00000467288 TRAV13-2A0A0B4J235 113 aa10.92□□□□□ -0.66
GMDS-203ENST00000467288 SLC25A20O43772 301 aa10.92□□□□□ -0.66
GMDS-203ENST00000467288 MUC17Q685J3 4493 aa10.91□□□□□ -0.66
GMDS-203ENST00000467288 LAMTOR3Q9UHA4 124 aa10.91□□□□□ -0.66
GMDS-203ENST00000467288 TAL2Q16559 108 aa10.9□□□□□ -0.66
GMDS-203ENST00000467288 TEX49A0A1B0GTD5 131 aa10.88□□□□□ -0.67
GMDS-203ENST00000467288 A4D1N5 150 aa10.88□□□□□ -0.67
GMDS-203ENST00000467288 DEFB105AQ8NG35 78 aa10.88□□□□□ -0.67
GMDS-203ENST00000467288 SMIM11BQ8TCY0 68 aa10.88□□□□□ -0.67
GMDS-203ENST00000467288 IGLV5-48A0A075B6I7 105 aa10.86□□□□□ -0.67
GMDS-203ENST00000467288 LINC01547P58512 204 aaPredicted RBP10.86□□□□□ -0.67
GMDS-203ENST00000467288 SCGB1D1O95968 90 aa10.85□□□□□ -0.67
GMDS-203ENST00000467288 Q1RN00 199 aa10.85□□□□□ -0.67
GMDS-203ENST00000467288 SMIM29Q86T20 159 aa10.85□□□□□ -0.67
GMDS-203ENST00000467288 NHP2Q9NX24 153 aaKnown RBP10.82□□□□□ -0.68
GMDS-203ENST00000467288 HRCT1Q6UXD1 115 aa10.81□□□□□ -0.68
GMDS-203ENST00000467288 LIMD2Q9BT23 127 aa10.81□□□□□ -0.68
GMDS-203ENST00000467288 PRO1933Q9H354 126 aa10.81□□□□□ -0.68
GMDS-203ENST00000467288 COX8AP10176 69 aa10.8□□□□□ -0.68
GMDS-203ENST00000467288 CD164Q04900 197 aa10.8□□□□□ -0.68
GMDS-203ENST00000467288 DLEU1O43261 78 aa10.78□□□□□ -0.68
GMDS-203ENST00000467288 VAMP3Q15836 100 aa10.78□□□□□ -0.68
GMDS-203ENST00000467288 ASB16-AS1Q495Z4 193 aa10.78□□□□□ -0.68
GMDS-203ENST00000467288 LINC00575Q6W349 94 aa10.76□□□□□ -0.69
GMDS-203ENST00000467288 HIST1H4GQ99525 98 aa10.76□□□□□ -0.69
GMDS-203ENST00000467288 H7C2G1 150 aa10.74□□□□□ -0.69
GMDS-203ENST00000467288 XP32Q5T750 250 aa10.73□□□□□ -0.69
GMDS-203ENST00000467288 Q5XG85 94 aa10.73□□□□□ -0.69
GMDS-203ENST00000467288 KRTAP9-6A0A140TA67 174 aa10.72□□□□□ -0.69
GMDS-203ENST00000467288 C12orf57Q99622 126 aa10.72□□□□□ -0.69
GMDS-203ENST00000467288 A0A0G2JQZ4 141 aa10.71□□□□□ -0.69
GMDS-203ENST00000467288 hADV29S1A0JD25 119 aa10.71□□□□□ -0.69
GMDS-203ENST00000467288 SEC61BP60468 96 aaKnown RBP10.71□□□□□ -0.69
GMDS-203ENST00000467288 C14orf144Q96I85 54 aa10.71□□□□□ -0.69
GMDS-203ENST00000467288 PAM16Q9Y3D7 125 aa10.7□□□□□ -0.7
GMDS-203ENST00000467288 SPATA45Q537H7 98 aa10.69□□□□□ -0.7
GMDS-203ENST00000467288 Q6ZQY7 126 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms