RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 HIGD2AQ9BW72 106 aa10.14□□□□□ -0.79
CHD1L-205ENST00000467213 C1orf43Q9BWL3 253 aa10.14□□□□□ -0.79
CHD1L-205ENST00000467213 hDV103S1A0JD37 113 aa10.14□□□□□ -0.79
CHD1L-205ENST00000467213 Q8NBF4 154 aa10.14□□□□□ -0.79
CHD1L-205ENST00000467213 Q6ZRX8 168 aa10.14□□□□□ -0.79
CHD1L-205ENST00000467213 HTN3P15516 51 aa10.13□□□□□ -0.79
CHD1L-205ENST00000467213 NKAPP1Q8N9T2 125 aa10.13□□□□□ -0.79
CHD1L-205ENST00000467213 ZNF462Q96JM2 2506 aa10.13□□□□□ -0.79
CHD1L-205ENST00000467213 A0A1W2PNM2 257 aa10.13□□□□□ -0.79
CHD1L-205ENST00000467213 SYCNQ0VAF6 134 aa10.13□□□□□ -0.79
CHD1L-205ENST00000467213 Q1T7F1 81 aa10.13□□□□□ -0.79
CHD1L-205ENST00000467213 WFDC10BQ8IUB3 73 aa10.13□□□□□ -0.79
CHD1L-205ENST00000467213 C3orf84H3BNL1 204 aa10.12□□□□□ -0.79
CHD1L-205ENST00000467213 FN1P02751 2386 aaKnown RBP10.12□□□□□ -0.79
CHD1L-205ENST00000467213 C7orf33Q8WU49 177 aa10.12□□□□□ -0.79
CHD1L-205ENST00000467213 LINC01556Q5JQF7 62 aa10.11□□□□□ -0.79
CHD1L-205ENST00000467213 SMIM29Q86T20 159 aa10.11□□□□□ -0.79
CHD1L-205ENST00000467213 CYP4F30PQ9H0H9 118 aa10.11□□□□□ -0.79
CHD1L-205ENST00000467213 ETDCA0A1B0GVM5 59 aa10.1□□□□□ -0.79
CHD1L-205ENST00000467213 SONP18583 2426 aaKnown RBP10.1□□□□□ -0.79
CHD1L-205ENST00000467213 BRK1Q8WUW1 75 aa10.09□□□□□ -0.79
CHD1L-205ENST00000467213 C1orf137Q5JT78 98 aa10.09□□□□□ -0.79
CHD1L-205ENST00000467213 CCDC168Q8NDH2 2452 aa10.08□□□□□ -0.8
CHD1L-205ENST00000467213 IGLV1-50A0A075B6I6 118 aa10.07□□□□□ -0.8
CHD1L-205ENST00000467213 NBEAL2Q6ZNJ1 2754 aa10.07□□□□□ -0.8
CHD1L-205ENST00000467213 FLNAP21333 2647 aaKnown RBP10.07□□□□□ -0.8
CHD1L-205ENST00000467213 DSCR10P59022 87 aa10.07□□□□□ -0.8
CHD1L-205ENST00000467213 GCN1Q92616 2671 aaKnown RBP10.07□□□□□ -0.8
CHD1L-205ENST00000467213 SERTAD4-AS1Q5TG53 156 aa10.06□□□□□ -0.8
CHD1L-205ENST00000467213 Q9BRP9 147 aa10.06□□□□□ -0.8
CHD1L-205ENST00000467213 NDUFB1O75438 58 aa10.05□□□□□ -0.8
CHD1L-205ENST00000467213 FAM30AQ9NZY2 134 aa10.05□□□□□ -0.8
CHD1L-205ENST00000467213 USP24Q9UPU5 2620 aa10.05□□□□□ -0.8
CHD1L-205ENST00000467213 MPLKIPQ8TAP9 179 aa10.05□□□□□ -0.8
CHD1L-205ENST00000467213 PRR15Q8IV56 129 aa10.04□□□□□ -0.8
CHD1L-205ENST00000467213 DEFB105AQ8NG35 78 aa10.04□□□□□ -0.8
CHD1L-205ENST00000467213 C1orf195Q5TG92 126 aa10.03□□□□□ -0.8
CHD1L-205ENST00000467213 NOTCH2Q04721 2471 aa10.02□□□□□ -0.8
CHD1L-205ENST00000467213 C1orf64Q8NEQ6 169 aa10.02□□□□□ -0.81
CHD1L-205ENST00000467213 PKIGQ9Y2B9 76 aa10.01□□□□□ -0.81
CHD1L-205ENST00000467213 HCG22E2RYF7 251 aa10.01□□□□□ -0.81
CHD1L-205ENST00000467213 DNAH10OSP0CZ25 163 aa10.01□□□□□ -0.81
CHD1L-205ENST00000467213 IGLV2-33A0A075B6J2 118 aaPredicted RBP10□□□□□ -0.81
CHD1L-205ENST00000467213 V9GYY9 64 aa10□□□□□ -0.81
CHD1L-205ENST00000467213 PDZD2O15018 2839 aa10□□□□□ -0.81
CHD1L-205ENST00000467213 IGKV2D-24A0A075B6R9 120 aa9.99□□□□□ -0.81
CHD1L-205ENST00000467213 IGLV8-61A0A075B6I0 122 aa9.98□□□□□ -0.81
CHD1L-205ENST00000467213 K7EQZ3 153 aa9.98□□□□□ -0.81
CHD1L-205ENST00000467213 H3BPC8 53 aa9.97□□□□□ -0.81
CHD1L-205ENST00000467213 SPANXA2-OT1Q8N9U9 137 aa9.95□□□□□ -0.82
CHD1L-205ENST00000467213 HIVEP2P31629 2446 aa9.95□□□□□ -0.82
CHD1L-205ENST00000467213 RPL37AP8A6NKH3 93 aa9.94□□□□□ -0.82
CHD1L-205ENST00000467213 MRPL55Q7Z7F7 128 aaKnown RBP9.94□□□□□ -0.82
CHD1L-205ENST00000467213 ST20-AS1Q8NBB2 130 aa9.94□□□□□ -0.82
CHD1L-205ENST00000467213 KRTAP7-1Q8IUC3 87 aa9.93□□□□□ -0.82
CHD1L-205ENST00000467213 ACANP16112 2415 aa9.93□□□□□ -0.82
CHD1L-205ENST00000467213 PSCAO43653 123 aa9.92□□□□□ -0.82
CHD1L-205ENST00000467213 LINC00476Q8WZB0 136 aa9.92□□□□□ -0.82
CHD1L-205ENST00000467213 MP68P56378 58 aa9.91□□□□□ -0.82
CHD1L-205ENST00000467213 LINC00588Q9Y4M8 146 aa9.91□□□□□ -0.82
CHD1L-205ENST00000467213 TRAV22A0A0B4J277 110 aa9.9□□□□□ -0.83
CHD1L-205ENST00000467213 REG3GQ6UW15 175 aa9.9□□□□□ -0.83
CHD1L-205ENST00000467213 KRTAP29-1A8MX34 341 aaPredicted RBP9.89□□□□□ -0.83
CHD1L-205ENST00000467213 MTORP42345 2549 aa9.88□□□□□ -0.83
CHD1L-205ENST00000467213 FAM168BA1KXE4 195 aa9.87□□□□□ -0.83
CHD1L-205ENST00000467213 UBE2BP63146 152 aa9.87□□□□□ -0.83
CHD1L-205ENST00000467213 IGFL1Q6UW32 110 aa9.87□□□□□ -0.83
CHD1L-205ENST00000467213 DEFB131BA0A096LNP1 70 aa9.86□□□□□ -0.83
CHD1L-205ENST00000467213 SMR3AQ99954 134 aa9.85□□□□□ -0.83
CHD1L-205ENST00000467213 B9D2Q9BPU9 175 aa9.84□□□□□ -0.83
CHD1L-205ENST00000467213 FASNP49327 2511 aaKnown RBP9.84□□□□□ -0.83
CHD1L-205ENST00000467213 VWFP04275 2813 aa9.84□□□□□ -0.83
CHD1L-205ENST00000467213 HECTD1Q9ULT8 2610 aa9.83□□□□□ -0.84
CHD1L-205ENST00000467213 RETNQ9HD89 108 aa9.82□□□□□ -0.84
CHD1L-205ENST00000467213 SPRR1BP22528 89 aa9.81□□□□□ -0.84
CHD1L-205ENST00000467213 C11orf45Q8TAV5 145 aa9.81□□□□□ -0.84
CHD1L-205ENST00000467213 PMAIP1Q13794 54 aa9.81□□□□□ -0.84
CHD1L-205ENST00000467213 LIMD2Q9BT23 127 aa9.81□□□□□ -0.84
CHD1L-205ENST00000467213 HIVEP1P15822 2718 aa9.81□□□□□ -0.84
CHD1L-205ENST00000467213 HELZ2Q9BYK8 2649 aaKnown RBP9.8□□□□□ -0.84
CHD1L-205ENST00000467213 H0Y9J4 135 aa9.79□□□□□ -0.84
CHD1L-205ENST00000467213 SEC61GP60059 68 aa9.79□□□□□ -0.84
CHD1L-205ENST00000467213 ITPR2Q14571 2701 aa9.78□□□□□ -0.84
CHD1L-205ENST00000467213 LRCOL1A6NCL2 159 aa9.78□□□□□ -0.84
CHD1L-205ENST00000467213 DNAH1Q9P2D7 4330 aa9.77□□□□□ -0.84
CHD1L-205ENST00000467213 C9orf163Q8N9P6 203 aa9.77□□□□□ -0.85
CHD1L-205ENST00000467213 TENM4Q6N022 2769 aa9.77□□□□□ -0.85
CHD1L-205ENST00000467213 A0A087WSZ3 146 aa9.76□□□□□ -0.85
CHD1L-205ENST00000467213 A8MWP4 228 aa9.76□□□□□ -0.85
CHD1L-205ENST00000467213 LINC00208Q96KT6 92 aa9.76□□□□□ -0.85
CHD1L-205ENST00000467213 H0Y9P7 68 aa9.76□□□□□ -0.85
CHD1L-205ENST00000467213 KRTAP10-11P60412 298 aa9.76□□□□□ -0.85
CHD1L-205ENST00000467213 Q5VV11 94 aa9.75□□□□□ -0.85
CHD1L-205ENST00000467213 CASC2Q6XLA1 102 aa9.75□□□□□ -0.85
CHD1L-205ENST00000467213 C16orf90A8MZG2 172 aa9.75□□□□□ -0.85
CHD1L-205ENST00000467213 INAFM1C9JVW0 142 aa9.75□□□□□ -0.85
CHD1L-205ENST00000467213 PSPHP1O15172 72 aa9.75□□□□□ -0.85
CHD1L-205ENST00000467213 WFDC13Q8IUB5 93 aa9.75□□□□□ -0.85
CHD1L-205ENST00000467213 LINC00472Q9H8W2 130 aa9.75□□□□□ -0.85
CHD1L-205ENST00000467213 CASC10Q5T4H9 136 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms