RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 MAP1LC3BQ9GZQ8 125 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 ST20Q9HBF5 79 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 XAGE1AQ9HD64 81 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 TGIF2-C20orf24A0A0A6YYL0 155 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 BORCS7-ASMTA0A0B4J1R7 106 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 TRBV6-5A0A0K0K1A5 114 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 TRBV27A0A0K0K1C4 114 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 A0A1B0GV50 99 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 C8orf87E5RJ46 101 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 TMEM250H0YL14 139 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 ZNF73O43830 326 aaPredicted RBP1.27□□□□□ -2.21
XRN1-206ENST00000467077 SPINK1P00995 79 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 ZNF22P17026 224 aaPredicted RBP1.27□□□□□ -2.21
XRN1-206ENST00000467077 CKS1BP61024 79 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 PRLHP81277 87 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 CENPWQ5EE01 88 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 C10orf91Q5T1B1 145 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 RPL7L1Q6DKI1 246 aaKnown RBP1.27□□□□□ -2.21
XRN1-206ENST00000467077 Q6ZUT4 128 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 C9orf62Q8N4C0 152 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 SFT2D1Q8WV19 159 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 FAM210AQ96ND0 272 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 TOMM7Q9P0U1 55 aa1.27□□□□□ -2.21
XRN1-206ENST00000467077 SSPOA2VEC9 5147 aa1.26□□□□□ -2.21
XRN1-206ENST00000467077 TRBV20OR9-2A0A075B6H5 130 aa1.26□□□□□ -2.21
XRN1-206ENST00000467077 GNG4P50150 75 aa1.26□□□□□ -2.21
XRN1-206ENST00000467077 HBBP68871 147 aa1.26□□□□□ -2.21
XRN1-206ENST00000467077 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
XRN1-206ENST00000467077 FAM19A2Q8N3H0 131 aa1.26□□□□□ -2.21
XRN1-206ENST00000467077 KCNRGQ8N5I3 272 aa1.26□□□□□ -2.21
XRN1-206ENST00000467077 PLEKHB2Q96CS7 222 aa1.26□□□□□ -2.21
XRN1-206ENST00000467077 CNFNQ9BYD5 112 aa1.26□□□□□ -2.21
XRN1-206ENST00000467077 TP73-AS1Q9UF72 201 aa1.26□□□□□ -2.21
XRN1-206ENST00000467077 FLGP20930 4061 aaPredicted RBP1.26□□□□□ -2.21
XRN1-206ENST00000467077 USH2AO75445 5202 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 C9orf92A6NGG3 77 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 TMEM238C9JI98 176 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 SLC25A20O43772 301 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 POLR2KP53803 58 aaKnown RBP1.25□□□□□ -2.21
XRN1-206ENST00000467077 MP68P56378 58 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 RPL39P62891 51 aaKnown RBP1.25□□□□□ -2.21
XRN1-206ENST00000467077 Q6Q795 121 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 FAM213BQ8TBF2 198 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 BORCS7Q96B45 105 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 SMIM12Q96EX1 92 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 C20orf166-AS1Q96NR2 134 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 TIMM21Q9BVV7 248 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 GNB1LQ9BYB4 327 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 BIN3Q9NQY0 253 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 GNG13Q9P2W3 67 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 NEBP20929 6669 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
XRN1-206ENST00000467077 FXYD6-FXYD2A0A087WZ82 144 aa1.24□□□□□ -2.21
XRN1-206ENST00000467077 F8VRH5 84 aa1.24□□□□□ -2.21
XRN1-206ENST00000467077 PPP1R17O96001 155 aa1.24□□□□□ -2.21
XRN1-206ENST00000467077 IFI27P40305 119 aaPredicted RBP1.24□□□□□ -2.21
XRN1-206ENST00000467077 RAB5BP61020 215 aa1.24□□□□□ -2.21
XRN1-206ENST00000467077 CCL20P78556 96 aa1.24□□□□□ -2.21
XRN1-206ENST00000467077 MRPS36P82909 103 aaKnown RBP1.24□□□□□ -2.21
XRN1-206ENST00000467077 Q5BKY6 102 aa1.24□□□□□ -2.21
XRN1-206ENST00000467077 MBD3L1Q8WWY6 194 aa1.24□□□□□ -2.21
XRN1-206ENST00000467077 SPRR4Q96PI1 79 aa1.24□□□□□ -2.21
XRN1-206ENST00000467077 TMEM126AQ9H061 195 aa1.24□□□□□ -2.21
XRN1-206ENST00000467077 MANBALQ9NQG1 85 aa1.24□□□□□ -2.21
XRN1-206ENST00000467077 SPANXA1Q9NS26 97 aa1.24□□□□□ -2.21
XRN1-206ENST00000467077 LINC00846Q9NV44 126 aa1.24□□□□□ -2.21
XRN1-206ENST00000467077 MED9Q9NWA0 146 aa1.24□□□□□ -2.21
XRN1-206ENST00000467077 A0A1B0GUT8 65 aa1.23□□□□□ -2.21
XRN1-206ENST00000467077 HIGD1CA8MV81 97 aa1.23□□□□□ -2.21
XRN1-206ENST00000467077 UMAD1C9J7I0 102 aa1.23□□□□□ -2.21
XRN1-206ENST00000467077 M0R378 163 aa1.23□□□□□ -2.21
XRN1-206ENST00000467077 ARPC5O15511 151 aa1.23□□□□□ -2.21
XRN1-206ENST00000467077 PDE6DO43924 150 aa1.23□□□□□ -2.21
XRN1-206ENST00000467077 RAB14P61106 215 aa1.23□□□□□ -2.21
XRN1-206ENST00000467077 RPS29P62273 56 aaKnown RBP1.23□□□□□ -2.21
XRN1-206ENST00000467077 AKAP14Q86UN6 197 aa1.23□□□□□ -2.21
XRN1-206ENST00000467077 Q8IZM0 81 aa1.23□□□□□ -2.21
XRN1-206ENST00000467077 TMEM141Q96I45 108 aa1.23□□□□□ -2.21
XRN1-206ENST00000467077 C2orf88Q9BSF0 95 aa1.23□□□□□ -2.21
XRN1-206ENST00000467077 TMEM191AQ9H0A3 160 aa1.23□□□□□ -2.21
XRN1-206ENST00000467077 CKS2P33552 79 aa1.22□□□□□ -2.21
XRN1-206ENST00000467077 KRTAP20-1Q3LI63 56 aa1.22□□□□□ -2.21
XRN1-206ENST00000467077 C9orf153Q5TBE3 101 aa1.22□□□□□ -2.21
XRN1-206ENST00000467077 SSBP3-AS1Q7Z2R9 100 aa1.22□□□□□ -2.21
XRN1-206ENST00000467077 SMCR5Q8TEV8 140 aa1.22□□□□□ -2.21
XRN1-206ENST00000467077 S100ZQ8WXG8 99 aa1.22□□□□□ -2.21
XRN1-206ENST00000467077 C20orf78Q9BR46 151 aa1.22□□□□□ -2.21
XRN1-206ENST00000467077 SMIM2Q9BVW6 85 aa1.22□□□□□ -2.21
XRN1-206ENST00000467077 EIF5A2Q9GZV4 153 aaKnown RBP1.22□□□□□ -2.21
XRN1-206ENST00000467077 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
XRN1-206ENST00000467077 KANTRA0A1W2PQU2 76 aa1.21□□□□□ -2.22
XRN1-206ENST00000467077 LINC00862A6NCI5 91 aa1.21□□□□□ -2.22
XRN1-206ENST00000467077 D6R8Y8 96 aa1.21□□□□□ -2.22
XRN1-206ENST00000467077 CEBPGP53567 150 aa1.21□□□□□ -2.22
XRN1-206ENST00000467077 HERVK_113P63121 156 aa1.21□□□□□ -2.22
XRN1-206ENST00000467077 SEC11AP67812 179 aa1.21□□□□□ -2.22
XRN1-206ENST00000467077 MRPL51Q4U2R6 128 aaKnown RBP1.21□□□□□ -2.22
XRN1-206ENST00000467077 HRCT1Q6UXD1 115 aa1.21□□□□□ -2.22
XRN1-206ENST00000467077 COX7B2Q8TF08 81 aa1.21□□□□□ -2.22
XRN1-206ENST00000467077 CDKN2A-AS1Q9UH64 79 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms