RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 DPH3Q96FX2 82 aa1.87□□□□□ -2.11
CALD1-214ENST00000466704 CARD19Q96LW7 228 aa1.87□□□□□ -2.11
CALD1-214ENST00000466704 PACRGQ96M98 296 aaPredicted RBP1.87□□□□□ -2.11
CALD1-214ENST00000466704 CST9LQ9H4G1 147 aa1.87□□□□□ -2.11
CALD1-214ENST00000466704 C8orf17Q9NRJ1 99 aa1.87□□□□□ -2.11
CALD1-214ENST00000466704 TOMM7Q9P0U1 55 aa1.87□□□□□ -2.11
CALD1-214ENST00000466704 CDKN2A-AS1Q9UH64 79 aa1.87□□□□□ -2.11
CALD1-214ENST00000466704 NDUFC2-KCTD14E9PQ53 114 aa1.86□□□□□ -2.11
CALD1-214ENST00000466704 NDUFA1O15239 70 aa1.86□□□□□ -2.11
CALD1-214ENST00000466704 LEPROTL1O95214 131 aa1.86□□□□□ -2.11
CALD1-214ENST00000466704 SMR3BP02814 79 aaPredicted RBP1.86□□□□□ -2.11
CALD1-214ENST00000466704 FABP4P15090 132 aa1.86□□□□□ -2.11
CALD1-214ENST00000466704 RPL18AQ02543 176 aaKnown RBP1.86□□□□□ -2.11
CALD1-214ENST00000466704 UNQ6190/PRO20217Q6UXQ8 127 aa1.86□□□□□ -2.11
CALD1-214ENST00000466704 SCXQ7RTU7 201 aa1.86□□□□□ -2.11
CALD1-214ENST00000466704 Q8IZM0 81 aa1.86□□□□□ -2.11
CALD1-214ENST00000466704 IFI27L1Q96BM0 104 aa1.86□□□□□ -2.11
CALD1-214ENST00000466704 MRPL35Q9NZE8 188 aaKnown RBP1.86□□□□□ -2.11
CALD1-214ENST00000466704 PKIGQ9Y2B9 76 aa1.86□□□□□ -2.11
CALD1-214ENST00000466704 FAT4Q6V0I7 4981 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 A0A096LNI7 61 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 TRAV12-1A0A0B4J245 112 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 LOC107984640A0A0U1RRK4 108 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 C11orf86A6NJI1 115 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 F8VRH5 84 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 H3BRM9 83 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 PSPHP1O15172 72 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 NUPR1O60356 82 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 HIST1H2BKO60814 126 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 OXTP01178 125 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 HIST1H2BJP06899 126 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 SPINK8P0C7L1 97 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 IGLC3P0DOY3 106 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 ZNF22P17026 224 aaPredicted RBP1.85□□□□□ -2.11
CALD1-214ENST00000466704 HIST1H2BOP23527 126 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 HIST1H2BBP33778 126 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 HIST1H2BDP58876 126 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 CKS1BP61024 79 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 HIST1H2BCP62807 126 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 CIRBPQ14011 172 aaKnown RBP1.85□□□□□ -2.11
CALD1-214ENST00000466704 HIST2H2BEQ16778 126 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.85□□□□□ -2.11
CALD1-214ENST00000466704 TMEM170BQ5T4T1 132 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 Q5VSD8 79 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 C2orf82Q6UX34 121 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 SPANXA2-OT1Q8N9U9 137 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 SPACA4Q8TDM5 124 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 HIST1H2BHQ93079 126 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 HIST1H2BNQ99877 126 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 HIST1H2BMQ99879 126 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 LINC00474Q9P2X8 69 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 C6orf48Q9UBA6 75 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 HSPB8Q9UJY1 196 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 RNF213Q63HN8 5207 aa1.85□□□□□ -2.11
CALD1-214ENST00000466704 DNAH8Q96JB1 4490 aa1.84□□□□□ -2.11
CALD1-214ENST00000466704 FAT1Q14517 4588 aa1.84□□□□□ -2.11
CALD1-214ENST00000466704 TRBV30A0A0K0K1B3 111 aa1.84□□□□□ -2.11
CALD1-214ENST00000466704 VAMP3Q15836 100 aa1.84□□□□□ -2.11
CALD1-214ENST00000466704 C9orf116Q5BN46 136 aaPredicted RBP1.84□□□□□ -2.11
CALD1-214ENST00000466704 COX7B2Q8TF08 81 aa1.84□□□□□ -2.11
CALD1-214ENST00000466704 PMCHL2Q9BQD1 86 aa1.84□□□□□ -2.11
CALD1-214ENST00000466704 MAP1LC3CQ9BXW4 147 aa1.84□□□□□ -2.11
CALD1-214ENST00000466704 PLAC8Q9NZF1 115 aa1.84□□□□□ -2.11
CALD1-214ENST00000466704 MYCBP2O75592 4640 aa1.84□□□□□ -2.12
CALD1-214ENST00000466704 FLG2Q5D862 2391 aaPredicted RBP1.84□□□□□ -2.12
CALD1-214ENST00000466704 A0A1W2PNN7 141 aa1.83□□□□□ -2.12
CALD1-214ENST00000466704 IGKCP01834 107 aa1.83□□□□□ -2.12
CALD1-214ENST00000466704 INAFM2P0DMQ5 153 aa1.83□□□□□ -2.12
CALD1-214ENST00000466704 PLNP26678 52 aa1.83□□□□□ -2.12
CALD1-214ENST00000466704 RPL37AP61513 92 aaKnown RBP1.83□□□□□ -2.12
CALD1-214ENST00000466704 SFTA2Q6UW10 78 aa1.83□□□□□ -2.12
CALD1-214ENST00000466704 C1orf64Q8NEQ6 169 aa1.83□□□□□ -2.12
CALD1-214ENST00000466704 ZNF625Q96I27 306 aaPredicted RBP1.83□□□□□ -2.12
CALD1-214ENST00000466704 SYS1-DBNDD2H3BUS1 97 aa1.82□□□□□ -2.12
CALD1-214ENST00000466704 DPM2O94777 84 aa1.82□□□□□ -2.12
CALD1-214ENST00000466704 S100A6P06703 90 aa1.82□□□□□ -2.12
CALD1-214ENST00000466704 C3orf79P0CE67 100 aa1.82□□□□□ -2.12
CALD1-214ENST00000466704 S100A2P29034 98 aa1.82□□□□□ -2.12
CALD1-214ENST00000466704 PSMB2P49721 201 aa1.82□□□□□ -2.12
CALD1-214ENST00000466704 KRTDAPP60985 99 aa1.82□□□□□ -2.12
CALD1-214ENST00000466704 C6orf99Q4VX62 202 aa1.82□□□□□ -2.12
CALD1-214ENST00000466704 PHF5AQ7RTV0 110 aaKnown RBP1.82□□□□□ -2.12
CALD1-214ENST00000466704 FAM19A5Q7Z5A7 132 aaPredicted RBP1.82□□□□□ -2.12
CALD1-214ENST00000466704 XAGE1AQ9HD64 81 aa1.82□□□□□ -2.12
CALD1-214ENST00000466704 ERG28Q9UKR5 140 aa1.82□□□□□ -2.12
CALD1-214ENST00000466704 MYMXA0A1B0GTQ4 84 aa1.81□□□□□ -2.12
CALD1-214ENST00000466704 C20orf202A1L168 122 aa1.81□□□□□ -2.12
CALD1-214ENST00000466704 J3QQQ9 107 aa1.81□□□□□ -2.12
CALD1-214ENST00000466704 M0QXV9 152 aa1.81□□□□□ -2.12
CALD1-214ENST00000466704 LEPROTO15243 131 aa1.81□□□□□ -2.12
CALD1-214ENST00000466704 LINC00158P58513 81 aa1.81□□□□□ -2.12
CALD1-214ENST00000466704 TSPEAR-AS2P59090 65 aa1.81□□□□□ -2.12
CALD1-214ENST00000466704 KRTAP10-4P60372 401 aaPredicted RBP1.81□□□□□ -2.12
CALD1-214ENST00000466704 UBE2BP63146 152 aa1.81□□□□□ -2.12
CALD1-214ENST00000466704 COX17Q14061 63 aa1.81□□□□□ -2.12
CALD1-214ENST00000466704 MEIG1Q5JSS6 88 aa1.81□□□□□ -2.12
CALD1-214ENST00000466704 LINC01545Q5VT33 79 aa1.81□□□□□ -2.12
CALD1-214ENST00000466704 HIST3H2BBQ8N257 126 aa1.81□□□□□ -2.12
CALD1-214ENST00000466704 PLEKHB2Q96CS7 222 aa1.81□□□□□ -2.12
CALD1-214ENST00000466704 NDUFA12Q9UI09 145 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms