RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 FAM168BA1KXE4 195 aa4.29□□□□□ -1.72
CLDN4-204ENST00000466411 PRYO14603 147 aa4.29□□□□□ -1.72
CLDN4-204ENST00000466411 COX8AP10176 69 aa4.29□□□□□ -1.72
CLDN4-204ENST00000466411 RPL28P46779 137 aaKnown RBP4.29□□□□□ -1.72
CLDN4-204ENST00000466411 SRSF9Q13242 221 aaKnown RBP eCLIP4.29□□□□□ -1.72
CLDN4-204ENST00000466411 S100A7L2Q5SY68 101 aa4.29□□□□□ -1.72
CLDN4-204ENST00000466411 SLC25A34Q6PIV7 304 aa4.29□□□□□ -1.72
CLDN4-204ENST00000466411 REG3GQ6UW15 175 aa4.29□□□□□ -1.72
CLDN4-204ENST00000466411 SPINK6Q6UWN8 80 aa4.29□□□□□ -1.72
CLDN4-204ENST00000466411 PHF5AQ7RTV0 110 aaKnown RBP4.29□□□□□ -1.72
CLDN4-204ENST00000466411 PSORS1C2Q9UIG4 136 aa4.29□□□□□ -1.72
CLDN4-204ENST00000466411 IGLV1-50A0A075B6I6 118 aa4.28□□□□□ -1.72
CLDN4-204ENST00000466411 BCE1O60756 84 aa4.28□□□□□ -1.72
CLDN4-204ENST00000466411 SMIM6P0DI80 62 aa4.28□□□□□ -1.72
CLDN4-204ENST00000466411 SPATA45Q537H7 98 aa4.28□□□□□ -1.72
CLDN4-204ENST00000466411 C1orf137Q5JT78 98 aa4.28□□□□□ -1.72
CLDN4-204ENST00000466411 PCP2Q8IVA1 136 aa4.28□□□□□ -1.72
CLDN4-204ENST00000466411 LINC00308Q8TCZ7 52 aa4.28□□□□□ -1.72
CLDN4-204ENST00000466411 DIRC1Q969H9 104 aa4.28□□□□□ -1.72
CLDN4-204ENST00000466411 LINC00167Q96N53 147 aa4.28□□□□□ -1.72
CLDN4-204ENST00000466411 LITAFQ99732 161 aa4.28□□□□□ -1.72
CLDN4-204ENST00000466411 TMEM126AQ9H061 195 aa4.28□□□□□ -1.72
CLDN4-204ENST00000466411 HIGD1BQ9P298 99 aa4.28□□□□□ -1.72
CLDN4-204ENST00000466411 TRAV13-2A0A0B4J235 113 aa4.27□□□□□ -1.73
CLDN4-204ENST00000466411 KRTAP4-8A0A0G2JLE6 195 aa4.27□□□□□ -1.73
CLDN4-204ENST00000466411 H0Y9J4 135 aa4.27□□□□□ -1.73
CLDN4-204ENST00000466411 DDTP30046 118 aa4.27□□□□□ -1.73
CLDN4-204ENST00000466411 HINT1P49773 126 aaPredicted RBP4.27□□□□□ -1.73
CLDN4-204ENST00000466411 PAM16Q9Y3D7 125 aa4.27□□□□□ -1.73
CLDN4-204ENST00000466411 IGLV7-43P04211 117 aa4.26□□□□□ -1.73
CLDN4-204ENST00000466411 TAL2Q16559 108 aa4.26□□□□□ -1.73
CLDN4-204ENST00000466411 PYY3Q5JQD4 70 aa4.26□□□□□ -1.73
CLDN4-204ENST00000466411 ADAMTSL4-AS1Q5T5F5 129 aa4.26□□□□□ -1.73
CLDN4-204ENST00000466411 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
CLDN4-204ENST00000466411 KRTAP7-1Q8IUC3 87 aa4.26□□□□□ -1.73
CLDN4-204ENST00000466411 LINC00337Q8N6G1 96 aa4.26□□□□□ -1.73
CLDN4-204ENST00000466411 DAND5Q8N907 189 aa4.26□□□□□ -1.73
CLDN4-204ENST00000466411 HIST1H4GQ99525 98 aa4.26□□□□□ -1.73
CLDN4-204ENST00000466411 KCNQ1DNQ9H478 68 aa4.26□□□□□ -1.73
CLDN4-204ENST00000466411 IGKV2-28A0A075B6P5 120 aa4.25□□□□□ -1.73
CLDN4-204ENST00000466411 ETDCA0A1B0GVM5 59 aa4.25□□□□□ -1.73
CLDN4-204ENST00000466411 NCR3O14931 201 aa4.25□□□□□ -1.73
CLDN4-204ENST00000466411 ZNF861PO60384 105 aa4.25□□□□□ -1.73
CLDN4-204ENST00000466411 IGKV2D-28P01615 120 aa4.25□□□□□ -1.73
CLDN4-204ENST00000466411 IGLV6-57P01721 117 aa4.25□□□□□ -1.73
CLDN4-204ENST00000466411 UBE2AP49459 152 aa4.25□□□□□ -1.73
CLDN4-204ENST00000466411 ZNF706Q9Y5V0 76 aaPredicted RBP4.25□□□□□ -1.73
CLDN4-204ENST00000466411 TRAV23DV6A0A075B6W5 121 aa4.24□□□□□ -1.73
CLDN4-204ENST00000466411 TRBV7-6A0A0J9YX20 115 aa4.24□□□□□ -1.73
CLDN4-204ENST00000466411 TRBV10-3A0A0K0K1G6 114 aa4.24□□□□□ -1.73
CLDN4-204ENST00000466411 A4D1N5 150 aa4.24□□□□□ -1.73
CLDN4-204ENST00000466411 GAGE10A6NGK3 116 aa4.24□□□□□ -1.73
CLDN4-204ENST00000466411 RPL37AP8A6NKH3 93 aa4.24□□□□□ -1.73
CLDN4-204ENST00000466411 PCP4P48539 62 aa4.24□□□□□ -1.73
CLDN4-204ENST00000466411 TTTY13Q9BZ97 58 aa4.24□□□□□ -1.73
CLDN4-204ENST00000466411 UQCR10Q9UDW1 63 aa4.24□□□□□ -1.73
CLDN4-204ENST00000466411 A0A0U1RQV1 116 aa4.23□□□□□ -1.73
CLDN4-204ENST00000466411 RPL13AP40429 203 aaKnown RBP4.23□□□□□ -1.73
CLDN4-204ENST00000466411 NPC2P61916 151 aa4.23□□□□□ -1.73
CLDN4-204ENST00000466411 OR13C6PQ8NH95 151 aa4.23□□□□□ -1.73
CLDN4-204ENST00000466411 C14orf144Q96I85 54 aa4.23□□□□□ -1.73
CLDN4-204ENST00000466411 NHP2Q9NX24 153 aaKnown RBP4.23□□□□□ -1.73
CLDN4-204ENST00000466411 ZNF73O43830 326 aaPredicted RBP4.22□□□□□ -1.73
CLDN4-204ENST00000466411 SNCGO76070 127 aa4.22□□□□□ -1.73
CLDN4-204ENST00000466411 SPRR1AP35321 89 aa4.22□□□□□ -1.73
CLDN4-204ENST00000466411 VAMP3Q15836 100 aa4.22□□□□□ -1.73
CLDN4-204ENST00000466411 SOSTDC1Q6X4U4 206 aa4.22□□□□□ -1.73
CLDN4-204ENST00000466411 FAM19A1Q7Z5A9 133 aa4.22□□□□□ -1.73
CLDN4-204ENST00000466411 MUSTN1Q8IVN3 82 aa4.22□□□□□ -1.73
CLDN4-204ENST00000466411 A6NDN8 102 aa4.21□□□□□ -1.74
CLDN4-204ENST00000466411 TSTD3H0UI37 97 aa4.21□□□□□ -1.74
CLDN4-204ENST00000466411 HSD52Q0P140 79 aa4.21□□□□□ -1.74
CLDN4-204ENST00000466411 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
CLDN4-204ENST00000466411 Q6ZRX8 168 aa4.21□□□□□ -1.74
CLDN4-204ENST00000466411 DHRS4-AS1Q9P1J3 65 aa4.21□□□□□ -1.74
CLDN4-204ENST00000466411 A0A0B4J2C4 111 aa4.2□□□□□ -1.74
CLDN4-204ENST00000466411 A0A1B0GWB2 263 aa4.2□□□□□ -1.74
CLDN4-204ENST00000466411 FAM229BQ4G0N7 80 aa4.2□□□□□ -1.74
CLDN4-204ENST00000466411 BVES-AS1Q5T3Y7 98 aa4.2□□□□□ -1.74
CLDN4-204ENST00000466411 KRTAP13-1Q8IUC0 172 aa4.2□□□□□ -1.74
CLDN4-204ENST00000466411 CEND1Q8N111 149 aa4.2□□□□□ -1.74
CLDN4-204ENST00000466411 Q8NDZ9 215 aa4.2□□□□□ -1.74
CLDN4-204ENST00000466411 RAB37Q96AX2 223 aa4.2□□□□□ -1.74
CLDN4-204ENST00000466411 KRTAP4-16G5E9R7 235 aaPredicted RBP4.19□□□□□ -1.74
CLDN4-204ENST00000466411 SLC25A20O43772 301 aa4.19□□□□□ -1.74
CLDN4-204ENST00000466411 LINC01600Q96MT4 127 aa4.19□□□□□ -1.74
CLDN4-204ENST00000466411 HIGD2AQ9BW72 106 aa4.19□□□□□ -1.74
CLDN4-204ENST00000466411 M0R143 59 aa4.18□□□□□ -1.74
CLDN4-204ENST00000466411 ELOF1P60002 83 aaKnown RBP4.18□□□□□ -1.74
CLDN4-204ENST00000466411 CTAG1AP78358 180 aa4.18□□□□□ -1.74
CLDN4-204ENST00000466411 PRLHP81277 87 aa4.18□□□□□ -1.74
CLDN4-204ENST00000466411 LCE5AQ5TCM9 118 aa4.18□□□□□ -1.74
CLDN4-204ENST00000466411 C2orf91Q6ZV80 131 aa4.18□□□□□ -1.74
CLDN4-204ENST00000466411 KRTAP11-1Q8IUC1 163 aa4.18□□□□□ -1.74
CLDN4-204ENST00000466411 CRYGAP11844 174 aa4.17□□□□□ -1.74
CLDN4-204ENST00000466411 COX7BP24311 80 aa4.17□□□□□ -1.74
CLDN4-204ENST00000466411 C6orf99Q4VX62 202 aa4.17□□□□□ -1.74
CLDN4-204ENST00000466411 H0YGX0 51 aa4.16□□□□□ -1.74
CLDN4-204ENST00000466411 COX6CP09669 75 aa4.16□□□□□ -1.74
CLDN4-204ENST00000466411 KRTAP10-8P60410 259 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms