RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 IGKCP01834 107 aa7.54□□□□□ -1.2
CHD3-207ENST00000466233 LGALS3P17931 250 aaKnown RBP7.54□□□□□ -1.2
CHD3-207ENST00000466233 TRGC2P03986 189 aa7.53□□□□□ -1.2
CHD3-207ENST00000466233 HINT1P49773 126 aaPredicted RBP7.53□□□□□ -1.2
CHD3-207ENST00000466233 LINC00310P59036 64 aa7.53□□□□□ -1.2
CHD3-207ENST00000466233 SLC25A34Q6PIV7 304 aa7.53□□□□□ -1.2
CHD3-207ENST00000466233 H0Y8G0 127 aa7.52□□□□□ -1.21
CHD3-207ENST00000466233 SERF1AO75920 110 aa7.52□□□□□ -1.21
CHD3-207ENST00000466233 SPRR1BP22528 89 aa7.51□□□□□ -1.21
CHD3-207ENST00000466233 E9PLD3 99 aa7.5□□□□□ -1.21
CHD3-207ENST00000466233 A0A0J9YXY3 114 aa7.49□□□□□ -1.21
CHD3-207ENST00000466233 KRTAP4-1Q9BYQ7 146 aa7.49□□□□□ -1.21
CHD3-207ENST00000466233 SPANXCQ9NY87 97 aa7.49□□□□□ -1.21
CHD3-207ENST00000466233 DHRS4-AS1Q9P1J3 65 aa7.49□□□□□ -1.21
CHD3-207ENST00000466233 TIMM17BO60830 172 aa7.48□□□□□ -1.21
CHD3-207ENST00000466233 ADAMTSL4-AS1Q5T5F5 129 aa7.48□□□□□ -1.21
CHD3-207ENST00000466233 C9orf153Q5TBE3 101 aa7.48□□□□□ -1.21
CHD3-207ENST00000466233 SOSTDC1Q6X4U4 206 aa7.48□□□□□ -1.21
CHD3-207ENST00000466233 LIMD2Q9BT23 127 aa7.48□□□□□ -1.21
CHD3-207ENST00000466233 FABP4P15090 132 aa7.47□□□□□ -1.21
CHD3-207ENST00000466233 CD164Q04900 197 aa7.46□□□□□ -1.22
CHD3-207ENST00000466233 EIF4EBP3O60516 100 aaPredicted RBP7.45□□□□□ -1.22
CHD3-207ENST00000466233 LINC00518Q8N0U6 118 aa7.45□□□□□ -1.22
CHD3-207ENST00000466233 SPANXDQ9BXN6 97 aa7.45□□□□□ -1.22
CHD3-207ENST00000466233 ST20-AS1Q8NBB2 130 aa7.44□□□□□ -1.22
CHD3-207ENST00000466233 LINC00308Q8TCZ7 52 aa7.44□□□□□ -1.22
CHD3-207ENST00000466233 LITAFQ99732 161 aa7.44□□□□□ -1.22
CHD3-207ENST00000466233 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
CHD3-207ENST00000466233 LAMTOR3Q9UHA4 124 aa7.44□□□□□ -1.22
CHD3-207ENST00000466233 TRBV7-6A0A0J9YX20 115 aa7.43□□□□□ -1.22
CHD3-207ENST00000466233 Q5XG85 94 aa7.43□□□□□ -1.22
CHD3-207ENST00000466233 COLCA2A8K830 154 aa7.42□□□□□ -1.22
CHD3-207ENST00000466233 SYS1-DBNDD2H3BUS1 97 aa7.41□□□□□ -1.22
CHD3-207ENST00000466233 ELOF1P60002 83 aaKnown RBP7.41□□□□□ -1.22
CHD3-207ENST00000466233 NPC2P61916 151 aa7.4□□□□□ -1.22
CHD3-207ENST00000466233 LCE2CQ5TA81 110 aa7.4□□□□□ -1.22
CHD3-207ENST00000466233 LINC01545Q5VT33 79 aa7.4□□□□□ -1.22
CHD3-207ENST00000466233 OR13C6PQ8NH95 151 aa7.4□□□□□ -1.22
CHD3-207ENST00000466233 PET117Q6UWS5 81 aa7.39□□□□□ -1.23
CHD3-207ENST00000466233 COPS9Q8WXC6 57 aa7.39□□□□□ -1.23
CHD3-207ENST00000466233 PRO1933Q9H354 126 aa7.39□□□□□ -1.23
CHD3-207ENST00000466233 TEX49A0A1B0GTD5 131 aa7.38□□□□□ -1.23
CHD3-207ENST00000466233 COX7BP24311 80 aa7.38□□□□□ -1.23
CHD3-207ENST00000466233 CFC1BP0CG36 223 aa7.37□□□□□ -1.23
CHD3-207ENST00000466233 KRTAP19-2Q3LHN2 52 aa7.37□□□□□ -1.23
CHD3-207ENST00000466233 ZNF815PA8K554 130 aa7.36□□□□□ -1.23
CHD3-207ENST00000466233 TAL2Q16559 108 aa7.36□□□□□ -1.23
CHD3-207ENST00000466233 C6orf99Q4VX62 202 aa7.36□□□□□ -1.23
CHD3-207ENST00000466233 A0A1B0GWB2 263 aa7.35□□□□□ -1.23
CHD3-207ENST00000466233 A4D1N5 150 aa7.35□□□□□ -1.23
CHD3-207ENST00000466233 IFITM1P13164 125 aa7.35□□□□□ -1.23
CHD3-207ENST00000466233 AKR1D1P51857 326 aa7.35□□□□□ -1.23
CHD3-207ENST00000466233 Q6ZVH6 145 aa7.35□□□□□ -1.23
CHD3-207ENST00000466233 IGLV5-48A0A075B6I7 105 aa7.34□□□□□ -1.23
CHD3-207ENST00000466233 H7C2G1 150 aa7.34□□□□□ -1.23
CHD3-207ENST00000466233 PCOTHQ58A44 107 aa7.34□□□□□ -1.23
CHD3-207ENST00000466233 IGLV8-61A0A075B6I0 122 aa7.33□□□□□ -1.24
CHD3-207ENST00000466233 HIST1H2BKO60814 126 aa7.33□□□□□ -1.24
CHD3-207ENST00000466233 HIST1H2BJP06899 126 aa7.33□□□□□ -1.24
CHD3-207ENST00000466233 HIST1H2BOP23527 126 aa7.33□□□□□ -1.24
CHD3-207ENST00000466233 HIST1H2BBP33778 126 aa7.33□□□□□ -1.24
CHD3-207ENST00000466233 HIST1H2BDP58876 126 aa7.33□□□□□ -1.24
CHD3-207ENST00000466233 HIST1H2BCP62807 126 aa7.33□□□□□ -1.24
CHD3-207ENST00000466233 HIST2H2BEQ16778 126 aa7.33□□□□□ -1.24
CHD3-207ENST00000466233 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.33□□□□□ -1.24
CHD3-207ENST00000466233 HIST1H2BHQ93079 126 aa7.33□□□□□ -1.24
CHD3-207ENST00000466233 HIST1H2BNQ99877 126 aa7.33□□□□□ -1.24
CHD3-207ENST00000466233 HIST1H2BMQ99879 126 aa7.33□□□□□ -1.24
CHD3-207ENST00000466233 HRCT1Q6UXD1 115 aa7.32□□□□□ -1.24
CHD3-207ENST00000466233 SMIM29Q86T20 159 aa7.32□□□□□ -1.24
CHD3-207ENST00000466233 MT1HP80294 61 aa7.31□□□□□ -1.24
CHD3-207ENST00000466233 CRCT1Q9UGL9 99 aa7.31□□□□□ -1.24
CHD3-207ENST00000466233 Q1RN00 199 aa7.3□□□□□ -1.24
CHD3-207ENST00000466233 COA6Q5JTJ3 125 aaKnown RBP7.3□□□□□ -1.24
CHD3-207ENST00000466233 NHP2Q9NX24 153 aaKnown RBP7.3□□□□□ -1.24
CHD3-207ENST00000466233 C9orf92A6NGG3 77 aa7.29□□□□□ -1.24
CHD3-207ENST00000466233 C1orf195Q5TG92 126 aa7.29□□□□□ -1.24
CHD3-207ENST00000466233 SCGB1D4Q6XE38 83 aa7.29□□□□□ -1.24
CHD3-207ENST00000466233 DEFB105AQ8NG35 78 aa7.29□□□□□ -1.24
CHD3-207ENST00000466233 C3orf79P0CE67 100 aa7.28□□□□□ -1.24
CHD3-207ENST00000466233 TRAV13-2A0A0B4J235 113 aa7.27□□□□□ -1.25
CHD3-207ENST00000466233 C20orf202A1L168 122 aa7.27□□□□□ -1.25
CHD3-207ENST00000466233 SLC7A5P1Q8MH63 180 aa7.27□□□□□ -1.25
CHD3-207ENST00000466233 TTTY13Q9BZ97 58 aa7.27□□□□□ -1.25
CHD3-207ENST00000466233 TCL1BO95988 128 aa7.26□□□□□ -1.25
CHD3-207ENST00000466233 RPL37P61927 97 aaKnown RBP7.26□□□□□ -1.25
CHD3-207ENST00000466233 A6NDN8 102 aa7.25□□□□□ -1.25
CHD3-207ENST00000466233 SNRPEP62304 92 aaKnown RBP7.25□□□□□ -1.25
CHD3-207ENST00000466233 FSIP2Q5CZC0 6907 aa7.24□□□□□ -1.25
CHD3-207ENST00000466233 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
CHD3-207ENST00000466233 KRTDAPP60985 99 aa7.22□□□□□ -1.25
CHD3-207ENST00000466233 VAMP3Q15836 100 aa7.22□□□□□ -1.25
CHD3-207ENST00000466233 MUSTN1Q8IVN3 82 aa7.22□□□□□ -1.25
CHD3-207ENST00000466233 Q6JHZ5 121 aa7.21□□□□□ -1.26
CHD3-207ENST00000466233 KRTAP3-3Q9BYR6 98 aa7.21□□□□□ -1.26
CHD3-207ENST00000466233 KRTAP3-2Q9BYR7 98 aa7.21□□□□□ -1.26
CHD3-207ENST00000466233 KRTAP10-6P60371 365 aaPredicted RBP7.2□□□□□ -1.26
CHD3-207ENST00000466233 ANKRD39Q53RE8 183 aa7.2□□□□□ -1.26
CHD3-207ENST00000466233 SMIM11BQ8TCY0 68 aa7.2□□□□□ -1.26
CHD3-207ENST00000466233 F8WEM9 126 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms