RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ATP5EP2Q5VTU8 51 aa12.13□□□□□ -0.47
CAPN3-209ENST00000466222 Q6ZRU5 148 aa12.13□□□□□ -0.47
CAPN3-209ENST00000466222 C3orf22Q8N5N4 141 aa12.13□□□□□ -0.47
CAPN3-209ENST00000466222 Q8NDZ9 215 aa12.13□□□□□ -0.47
CAPN3-209ENST00000466222 CAMK2N2Q96S95 79 aa12.12□□□□□ -0.47
CAPN3-209ENST00000466222 C6orf48Q9UBA6 75 aa12.11□□□□□ -0.47
CAPN3-209ENST00000466222 hADV29S1A0JD25 119 aa12.11□□□□□ -0.47
CAPN3-209ENST00000466222 LRCOL1A6NCL2 159 aa12.1□□□□□ -0.47
CAPN3-209ENST00000466222 DNAH17Q9UFH2 4485 aa12.09□□□□□ -0.47
CAPN3-209ENST00000466222 C1orf134Q5TEV5 83 aa12.08□□□□□ -0.48
CAPN3-209ENST00000466222 FRAS1Q86XX4 4008 aa12.08□□□□□ -0.48
CAPN3-209ENST00000466222 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-209ENST00000466222 COX7CP15954 63 aa12.07□□□□□ -0.48
CAPN3-209ENST00000466222 RPL18AQ02543 176 aaKnown RBP12.07□□□□□ -0.48
CAPN3-209ENST00000466222 C2orf48Q96LS8 159 aa12.07□□□□□ -0.48
CAPN3-209ENST00000466222 IGKV3D-7A0A0C4DH55 119 aa12.07□□□□□ -0.48
CAPN3-209ENST00000466222 GHRHP01286 108 aa12.06□□□□□ -0.48
CAPN3-209ENST00000466222 SYCNQ0VAF6 134 aa12.06□□□□□ -0.48
CAPN3-209ENST00000466222 C9orf153Q5TBE3 101 aa12.06□□□□□ -0.48
CAPN3-209ENST00000466222 LOC110117498A0A087WWA1 95 aa12.05□□□□□ -0.48
CAPN3-209ENST00000466222 FUSP35637 526 aaKnown RBP eCLIP12.05□□□□□ -0.48
CAPN3-209ENST00000466222 TRBV7-6A0A0J9YX20 115 aa12.05□□□□□ -0.48
CAPN3-209ENST00000466222 DIRC1Q969H9 104 aa12.05□□□□□ -0.48
CAPN3-209ENST00000466222 TRAV23DV6A0A075B6W5 121 aa12.04□□□□□ -0.48
CAPN3-209ENST00000466222 F8WDY8 70 aa12.04□□□□□ -0.48
CAPN3-209ENST00000466222 RBM3P98179 157 aaKnown RBP12.04□□□□□ -0.48
CAPN3-209ENST00000466222 PDE6GP18545 87 aa12.03□□□□□ -0.48
CAPN3-209ENST00000466222 FAT2Q9NYQ8 4349 aa12.03□□□□□ -0.48
CAPN3-209ENST00000466222 TRBV10-3A0A0K0K1G6 114 aa12.03□□□□□ -0.48
CAPN3-209ENST00000466222 UBL5Q9BZL1 73 aa12.03□□□□□ -0.48
CAPN3-209ENST00000466222 LCE6AA0A183 80 aa12.02□□□□□ -0.49
CAPN3-209ENST00000466222 RYR2Q92736 4967 aa12.02□□□□□ -0.49
CAPN3-209ENST00000466222 A0A087WTM6 91 aa12.01□□□□□ -0.49
CAPN3-209ENST00000466222 HECTD4Q9Y4D8 3996 aa12.01□□□□□ -0.49
CAPN3-209ENST00000466222 RTL8CO15255 209 aa12.01□□□□□ -0.49
CAPN3-209ENST00000466222 Q6ZQT0 140 aa12.01□□□□□ -0.49
CAPN3-209ENST00000466222 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12□□□□□ -0.49
CAPN3-209ENST00000466222 CRYGAP11844 174 aa11.99□□□□□ -0.49
CAPN3-209ENST00000466222 TNP2Q05952 138 aa11.99□□□□□ -0.49
CAPN3-209ENST00000466222 Q6ZRP5 223 aa11.99□□□□□ -0.49
CAPN3-209ENST00000466222 XAGE1AQ9HD64 81 aa11.99□□□□□ -0.49
CAPN3-209ENST00000466222 LAMTOR3Q9UHA4 124 aa11.99□□□□□ -0.49
CAPN3-209ENST00000466222 COX7BP24311 80 aa11.99□□□□□ -0.49
CAPN3-209ENST00000466222 DNAH11Q96DT5 4516 aa11.99□□□□□ -0.49
CAPN3-209ENST00000466222 ZNF73O43830 326 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-209ENST00000466222 M0R378 163 aa11.98□□□□□ -0.49
CAPN3-209ENST00000466222 VPREB1P12018 145 aa11.98□□□□□ -0.49
CAPN3-209ENST00000466222 Q6ZQY7 126 aa11.98□□□□□ -0.49
CAPN3-209ENST00000466222 SERP2Q8N6R1 65 aa11.98□□□□□ -0.49
CAPN3-209ENST00000466222 ELOF1P60002 83 aaKnown RBP11.97□□□□□ -0.49
CAPN3-209ENST00000466222 CNBPP62633 177 aaKnown RBP11.96□□□□□ -0.49
CAPN3-209ENST00000466222 SVIPQ8NHG7 77 aa11.96□□□□□ -0.49
CAPN3-209ENST00000466222 DSCR8Q96T75 97 aa11.96□□□□□ -0.49
CAPN3-209ENST00000466222 NDUFC2-KCTD14E9PQ53 114 aa11.96□□□□□ -0.5
CAPN3-209ENST00000466222 C14orf177Q52M58 125 aa11.96□□□□□ -0.5
CAPN3-209ENST00000466222 A0A087WVE0 104 aa11.94□□□□□ -0.5
CAPN3-209ENST00000466222 RYR3Q15413 4870 aa11.92□□□□□ -0.5
CAPN3-209ENST00000466222 PKD1P98161 4303 aa11.9□□□□□ -0.5
CAPN3-209ENST00000466222 BCE1O60756 84 aa11.9□□□□□ -0.51
CAPN3-209ENST00000466222 TLX1NBP0CAT3 122 aa11.89□□□□□ -0.51
CAPN3-209ENST00000466222 SMIM20Q8N5G0 67 aa11.89□□□□□ -0.51
CAPN3-209ENST00000466222 C9orf163Q8N9P6 203 aa11.89□□□□□ -0.51
CAPN3-209ENST00000466222 TRBV7-4A0A0J9YYF1 115 aa11.88□□□□□ -0.51
CAPN3-209ENST00000466222 DNAH5Q8TE73 4624 aa11.87□□□□□ -0.51
CAPN3-209ENST00000466222 A0A096LNI7 61 aa11.87□□□□□ -0.51
CAPN3-209ENST00000466222 IGKV2-24A0A0C4DH68 120 aa11.87□□□□□ -0.51
CAPN3-209ENST00000466222 FAM168BA1KXE4 195 aa11.87□□□□□ -0.51
CAPN3-209ENST00000466222 KRTAP10-2P60368 255 aa11.87□□□□□ -0.51
CAPN3-209ENST00000466222 LINC00528Q8N1L1 170 aa11.87□□□□□ -0.51
CAPN3-209ENST00000466222 LOC107984640A0A0U1RRK4 108 aa11.86□□□□□ -0.51
CAPN3-209ENST00000466222 CHTF8P0CG12 524 aa11.86□□□□□ -0.51
CAPN3-209ENST00000466222 CXCL6P80162 114 aa11.85□□□□□ -0.51
CAPN3-209ENST00000466222 Q6ZVQ6 151 aa11.85□□□□□ -0.51
CAPN3-209ENST00000466222 FAM19A1Q7Z5A9 133 aa11.85□□□□□ -0.51
CAPN3-209ENST00000466222 SERTAD4-AS1Q5TG53 156 aa11.84□□□□□ -0.51
CAPN3-209ENST00000466222 PANO1I0J062 215 aa11.84□□□□□ -0.51
CAPN3-209ENST00000466222 LINC01547P58512 204 aaPredicted RBP11.84□□□□□ -0.51
CAPN3-209ENST00000466222 KRTAP7-1Q8IUC3 87 aa11.83□□□□□ -0.52
CAPN3-209ENST00000466222 IGLV5-52A0A0A0MRZ9 124 aa11.82□□□□□ -0.52
CAPN3-209ENST00000466222 TMEM258P61165 79 aa11.82□□□□□ -0.52
CAPN3-209ENST00000466222 C16orf90A8MZG2 172 aa11.81□□□□□ -0.52
CAPN3-209ENST00000466222 PLA2G2DQ9UNK4 145 aa11.81□□□□□ -0.52
CAPN3-209ENST00000466222 PKHD1P08F94 4074 aa11.81□□□□□ -0.52
CAPN3-209ENST00000466222 KCNQ1DNQ9H478 68 aa11.8□□□□□ -0.52
CAPN3-209ENST00000466222 NKAPP1Q8N9T2 125 aa11.8□□□□□ -0.52
CAPN3-209ENST00000466222 HAMPP81172 84 aa11.79□□□□□ -0.52
CAPN3-209ENST00000466222 A0A1W2PNN7 141 aa11.78□□□□□ -0.52
CAPN3-209ENST00000466222 FAM19A5Q7Z5A7 132 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-209ENST00000466222 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-209ENST00000466222 RPS28P62857 69 aaKnown RBP11.77□□□□□ -0.53
CAPN3-209ENST00000466222 J3KT08 172 aa11.76□□□□□ -0.53
CAPN3-209ENST00000466222 IGLV5-37A0A075B6J1 123 aa11.75□□□□□ -0.53
CAPN3-209ENST00000466222 TRAV7A0A075B6U4 112 aa11.74□□□□□ -0.53
CAPN3-209ENST00000466222 C7orf33Q8WU49 177 aa11.74□□□□□ -0.53
CAPN3-209ENST00000466222 PRYO14603 147 aa11.72□□□□□ -0.53
CAPN3-209ENST00000466222 DPH3Q96FX2 82 aa11.72□□□□□ -0.53
CAPN3-209ENST00000466222 CYSTM1Q9H1C7 97 aa11.72□□□□□ -0.53
CAPN3-209ENST00000466222 DHRS4-AS1Q9P1J3 65 aa11.72□□□□□ -0.53
CAPN3-209ENST00000466222 DNAH8Q96JB1 4490 aa11.71□□□□□ -0.53
CAPN3-209ENST00000466222 SPACA4Q8TDM5 124 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms