RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 HSBP1L1C9JCN9 74 aa2.88□□□□□ -1.95
EXOSC3-204ENST00000465860 IGKCP01834 107 aa2.88□□□□□ -1.95
EXOSC3-204ENST00000465860 IGLV7-43P04211 117 aa2.88□□□□□ -1.95
EXOSC3-204ENST00000465860 PFN2P35080 140 aa2.88□□□□□ -1.95
EXOSC3-204ENST00000465860 TSPEAR-AS2P59090 65 aa2.88□□□□□ -1.95
EXOSC3-204ENST00000465860 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
EXOSC3-204ENST00000465860 SPINK6Q6UWN8 80 aa2.88□□□□□ -1.95
EXOSC3-204ENST00000465860 HIST1H2BLQ99880 126 aa2.88□□□□□ -1.95
EXOSC3-204ENST00000465860 PMCHL2Q9BQD1 86 aa2.88□□□□□ -1.95
EXOSC3-204ENST00000465860 IGLV9-49A0A0B4J1Y8 123 aa2.87□□□□□ -1.95
EXOSC3-204ENST00000465860 A0A0U1RRA0 63 aa2.87□□□□□ -1.95
EXOSC3-204ENST00000465860 TMEM223A0PJW6 202 aa2.87□□□□□ -1.95
EXOSC3-204ENST00000465860 RPL37AP8A6NKH3 93 aa2.87□□□□□ -1.95
EXOSC3-204ENST00000465860 KRTAP1-4P0C5Y4 121 aa2.87□□□□□ -1.95
EXOSC3-204ENST00000465860 C3orf79P0CE67 100 aa2.87□□□□□ -1.95
EXOSC3-204ENST00000465860 ADAMTSL4-AS1Q5T5F5 129 aa2.87□□□□□ -1.95
EXOSC3-204ENST00000465860 LINC01545Q5VT33 79 aa2.87□□□□□ -1.95
EXOSC3-204ENST00000465860 PLEKHB2Q96CS7 222 aa2.87□□□□□ -1.95
EXOSC3-204ENST00000465860 LINC00167Q96N53 147 aa2.87□□□□□ -1.95
EXOSC3-204ENST00000465860 LINC00587B1AMM8 73 aa2.86□□□□□ -1.95
EXOSC3-204ENST00000465860 LGALS3P17931 250 aaKnown RBP2.86□□□□□ -1.95
EXOSC3-204ENST00000465860 NMUP48645 174 aa2.86□□□□□ -1.95
EXOSC3-204ENST00000465860 HERV-K104P63124 156 aa2.86□□□□□ -1.95
EXOSC3-204ENST00000465860 UBE2BP63146 152 aa2.86□□□□□ -1.95
EXOSC3-204ENST00000465860 MRPL55Q7Z7F7 128 aaKnown RBP2.86□□□□□ -1.95
EXOSC3-204ENST00000465860 SND1-IT1Q9HBX3 110 aa2.86□□□□□ -1.95
EXOSC3-204ENST00000465860 ERG28Q9UKR5 140 aa2.86□□□□□ -1.95
EXOSC3-204ENST00000465860 IGKV2-28A0A075B6P5 120 aa2.85□□□□□ -1.95
EXOSC3-204ENST00000465860 MYMXA0A1B0GTQ4 84 aa2.85□□□□□ -1.95
EXOSC3-204ENST00000465860 H0Y9J4 135 aa2.85□□□□□ -1.95
EXOSC3-204ENST00000465860 IGKV2D-28P01615 120 aa2.85□□□□□ -1.95
EXOSC3-204ENST00000465860 SMIM13P0DJ93 91 aa2.85□□□□□ -1.95
EXOSC3-204ENST00000465860 TP73-AS1Q9UF72 201 aa2.85□□□□□ -1.95
EXOSC3-204ENST00000465860 RNF213Q63HN8 5207 aa2.85□□□□□ -1.95
EXOSC3-204ENST00000465860 TMEM238C9JI98 176 aa2.84□□□□□ -1.95
EXOSC3-204ENST00000465860 E9PLD3 99 aa2.84□□□□□ -1.95
EXOSC3-204ENST00000465860 J3QQQ9 107 aa2.84□□□□□ -1.95
EXOSC3-204ENST00000465860 LEPROTO15243 131 aa2.84□□□□□ -1.95
EXOSC3-204ENST00000465860 ZNF861PO60384 105 aa2.84□□□□□ -1.95
EXOSC3-204ENST00000465860 REG3GQ6UW15 175 aa2.84□□□□□ -1.95
EXOSC3-204ENST00000465860 KRTAP13-1Q8IUC0 172 aa2.84□□□□□ -1.95
EXOSC3-204ENST00000465860 DAND5Q8N907 189 aa2.84□□□□□ -1.95
EXOSC3-204ENST00000465860 ANAPC11Q9NYG5 84 aa2.84□□□□□ -1.95
EXOSC3-204ENST00000465860 NDUFA12Q9UI09 145 aa2.84□□□□□ -1.95
EXOSC3-204ENST00000465860 IGLV1-50A0A075B6I6 118 aa2.83□□□□□ -1.96
EXOSC3-204ENST00000465860 M0R378 163 aa2.83□□□□□ -1.96
EXOSC3-204ENST00000465860 BCE1O60756 84 aa2.83□□□□□ -1.96
EXOSC3-204ENST00000465860 LINC00158P58513 81 aa2.83□□□□□ -1.96
EXOSC3-204ENST00000465860 COX17Q14061 63 aa2.83□□□□□ -1.96
EXOSC3-204ENST00000465860 MEIG1Q5JSS6 88 aa2.83□□□□□ -1.96
EXOSC3-204ENST00000465860 COPS9Q8WXC6 57 aa2.83□□□□□ -1.96
EXOSC3-204ENST00000465860 DIRC1Q969H9 104 aa2.83□□□□□ -1.96
EXOSC3-204ENST00000465860 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
EXOSC3-204ENST00000465860 MIEN1Q9BRT3 115 aa2.83□□□□□ -1.96
EXOSC3-204ENST00000465860 VAMP8Q9BV40 100 aa2.83□□□□□ -1.96
EXOSC3-204ENST00000465860 IGKV2D-26A0A0A0MRZ7 120 aa2.82□□□□□ -1.96
EXOSC3-204ENST00000465860 ZNF815PA8K554 130 aa2.82□□□□□ -1.96
EXOSC3-204ENST00000465860 S100A12P80511 92 aa2.82□□□□□ -1.96
EXOSC3-204ENST00000465860 PRLHP81277 87 aa2.82□□□□□ -1.96
EXOSC3-204ENST00000465860 JOSD1Q15040 202 aaPredicted RBP2.82□□□□□ -1.96
EXOSC3-204ENST00000465860 KRTAP13-2Q52LG2 175 aa2.82□□□□□ -1.96
EXOSC3-204ENST00000465860 SOSTDC1Q6X4U4 206 aa2.82□□□□□ -1.96
EXOSC3-204ENST00000465860 SCGB1D4Q6XE38 83 aa2.82□□□□□ -1.96
EXOSC3-204ENST00000465860 ATOH7Q8N100 152 aa2.82□□□□□ -1.96
EXOSC3-204ENST00000465860 MIR7-3HGQ8N6C7 128 aa2.82□□□□□ -1.96
EXOSC3-204ENST00000465860 NKAPP1Q8N9T2 125 aa2.82□□□□□ -1.96
EXOSC3-204ENST00000465860 TTTY13Q9BZ97 58 aa2.82□□□□□ -1.96
EXOSC3-204ENST00000465860 TMEM126AQ9H061 195 aa2.82□□□□□ -1.96
EXOSC3-204ENST00000465860 NCR3O14931 201 aa2.81□□□□□ -1.96
EXOSC3-204ENST00000465860 TIMM17BO60830 172 aa2.81□□□□□ -1.96
EXOSC3-204ENST00000465860 SMIM6P0DI80 62 aa2.81□□□□□ -1.96
EXOSC3-204ENST00000465860 NPC2P61916 151 aa2.81□□□□□ -1.96
EXOSC3-204ENST00000465860 BOD1L2Q8IYS8 172 aa2.81□□□□□ -1.96
EXOSC3-204ENST00000465860 LOC107984156A0A0G2JMH3 177 aa2.8□□□□□ -1.96
EXOSC3-204ENST00000465860 A0A0J9YXY3 114 aa2.8□□□□□ -1.96
EXOSC3-204ENST00000465860 TRBV10-3A0A0K0K1G6 114 aa2.8□□□□□ -1.96
EXOSC3-204ENST00000465860 KRTAP4-16G5E9R7 235 aaPredicted RBP2.8□□□□□ -1.96
EXOSC3-204ENST00000465860 RPL28P46779 137 aaKnown RBP2.8□□□□□ -1.96
EXOSC3-204ENST00000465860 SPATA45Q537H7 98 aa2.8□□□□□ -1.96
EXOSC3-204ENST00000465860 Q6ZVH6 145 aa2.8□□□□□ -1.96
EXOSC3-204ENST00000465860 FAM19A1Q7Z5A9 133 aa2.8□□□□□ -1.96
EXOSC3-204ENST00000465860 ARL17AQ8IVW1 177 aa2.8□□□□□ -1.96
EXOSC3-204ENST00000465860 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
EXOSC3-204ENST00000465860 CBY1Q9Y3M2 126 aa2.8□□□□□ -1.96
EXOSC3-204ENST00000465860 COX8AP10176 69 aa2.79□□□□□ -1.96
EXOSC3-204ENST00000465860 UBE2AP49459 152 aa2.79□□□□□ -1.96
EXOSC3-204ENST00000465860 PYY3Q5JQD4 70 aa2.79□□□□□ -1.96
EXOSC3-204ENST00000465860 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
EXOSC3-204ENST00000465860 SLC25A34Q6PIV7 304 aa2.79□□□□□ -1.96
EXOSC3-204ENST00000465860 C3orf22Q8N5N4 141 aa2.79□□□□□ -1.96
EXOSC3-204ENST00000465860 MUC2Q02817 5179 aa2.79□□□□□ -1.96
EXOSC3-204ENST00000465860 IGLV7-46A0A075B6I9 117 aa2.78□□□□□ -1.96
EXOSC3-204ENST00000465860 DLEU1O43261 78 aa2.78□□□□□ -1.96
EXOSC3-204ENST00000465860 ERC2-IT1O76042 136 aa2.78□□□□□ -1.96
EXOSC3-204ENST00000465860 TSPAN13O95857 204 aa2.78□□□□□ -1.96
EXOSC3-204ENST00000465860 IFITM1P13164 125 aa2.78□□□□□ -1.96
EXOSC3-204ENST00000465860 SPRR1AP35321 89 aa2.78□□□□□ -1.96
EXOSC3-204ENST00000465860 KRTAP12-2P59991 146 aa2.78□□□□□ -1.96
EXOSC3-204ENST00000465860 SMCR5Q8TEV8 140 aa2.78□□□□□ -1.96
EXOSC3-204ENST00000465860 SPANXDQ9BXN6 97 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms