RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 KRTAP1-1Q07627 177 aa13.04□□□□□ -0.32
SDF4-205ENST00000465727 ESRGQ1W209 222 aa13.03□□□□□ -0.32
SDF4-205ENST00000465727 HTN3P15516 51 aa13.01□□□□□ -0.33
SDF4-205ENST00000465727 Q6ZTC4 211 aa13.01□□□□□ -0.33
SDF4-205ENST00000465727 IGLV5-48A0A075B6I7 105 aa13.01□□□□□ -0.33
SDF4-205ENST00000465727 Q6ZRU5 148 aa13□□□□□ -0.33
SDF4-205ENST00000465727 FAM229BQ4G0N7 80 aa13□□□□□ -0.33
SDF4-205ENST00000465727 BRK1Q8WUW1 75 aa12.99□□□□□ -0.33
SDF4-205ENST00000465727 ACANP16112 2415 aa12.98□□□□□ -0.33
SDF4-205ENST00000465727 C3orf84H3BNL1 204 aa12.98□□□□□ -0.33
SDF4-205ENST00000465727 F8WDY8 70 aa12.98□□□□□ -0.33
SDF4-205ENST00000465727 KRTAP10-3P60369 221 aa12.98□□□□□ -0.33
SDF4-205ENST00000465727 KRTAP26-1Q6PEX3 210 aa12.97□□□□□ -0.33
SDF4-205ENST00000465727 HIGD2AQ9BW72 106 aa12.97□□□□□ -0.33
SDF4-205ENST00000465727 KCNQ1DNQ9H478 68 aa12.97□□□□□ -0.33
SDF4-205ENST00000465727 LCE6AA0A183 80 aa12.97□□□□□ -0.33
SDF4-205ENST00000465727 KPRPQ5T749 579 aaPredicted RBP12.96□□□□□ -0.33
SDF4-205ENST00000465727 C15orf56Q8N910 161 aa12.95□□□□□ -0.34
SDF4-205ENST00000465727 MPLKIPQ8TAP9 179 aa12.95□□□□□ -0.34
SDF4-205ENST00000465727 MTORP42345 2549 aa12.94□□□□□ -0.34
SDF4-205ENST00000465727 Q8N377 158 aa12.94□□□□□ -0.34
SDF4-205ENST00000465727 PKIGQ9Y2B9 76 aa12.93□□□□□ -0.34
SDF4-205ENST00000465727 Q6ZRP5 223 aa12.92□□□□□ -0.34
SDF4-205ENST00000465727 SMIM29Q86T20 159 aa12.92□□□□□ -0.34
SDF4-205ENST00000465727 DHRS4-AS1Q9P1J3 65 aa12.92□□□□□ -0.34
SDF4-205ENST00000465727 H3BNG1 76 aa12.9□□□□□ -0.34
SDF4-205ENST00000465727 NKAPP1Q8N9T2 125 aa12.9□□□□□ -0.34
SDF4-205ENST00000465727 WFDC10BQ8IUB3 73 aa12.9□□□□□ -0.34
SDF4-205ENST00000465727 DEFB105AQ8NG35 78 aa12.89□□□□□ -0.35
SDF4-205ENST00000465727 ANK3Q12955 4377 aaKnown RBP12.89□□□□□ -0.35
SDF4-205ENST00000465727 SMR3AQ99954 134 aa12.88□□□□□ -0.35
SDF4-205ENST00000465727 hDV103S1A0JD37 113 aa12.87□□□□□ -0.35
SDF4-205ENST00000465727 FAM30AQ9NZY2 134 aa12.87□□□□□ -0.35
SDF4-205ENST00000465727 A0A1W2PNM2 257 aa12.86□□□□□ -0.35
SDF4-205ENST00000465727 TNP2Q05952 138 aa12.85□□□□□ -0.35
SDF4-205ENST00000465727 SYCNQ0VAF6 134 aa12.85□□□□□ -0.35
SDF4-205ENST00000465727 C7orf33Q8WU49 177 aa12.85□□□□□ -0.35
SDF4-205ENST00000465727 Q6ZRX8 168 aa12.85□□□□□ -0.35
SDF4-205ENST00000465727 Q8NBF4 154 aa12.85□□□□□ -0.35
SDF4-205ENST00000465727 HIVEP2P31629 2446 aa12.85□□□□□ -0.35
SDF4-205ENST00000465727 C1orf137Q5JT78 98 aa12.84□□□□□ -0.35
SDF4-205ENST00000465727 C1orf195Q5TG92 126 aa12.84□□□□□ -0.35
SDF4-205ENST00000465727 ZCCHC13Q8WW36 166 aaKnown RBP12.84□□□□□ -0.35
SDF4-205ENST00000465727 SPRR4Q96PI1 79 aa12.84□□□□□ -0.35
SDF4-205ENST00000465727 PLA2G2DQ9UNK4 145 aa12.83□□□□□ -0.36
SDF4-205ENST00000465727 ETDCA0A1B0GVM5 59 aa12.82□□□□□ -0.36
SDF4-205ENST00000465727 Q1T7F1 81 aa12.81□□□□□ -0.36
SDF4-205ENST00000465727 SERTAD4-AS1Q5TG53 156 aa12.81□□□□□ -0.36
SDF4-205ENST00000465727 KRTAP4-16G5E9R7 235 aaPredicted RBP12.79□□□□□ -0.36
SDF4-205ENST00000465727 TLX1NBP0CAT3 122 aa12.79□□□□□ -0.36
SDF4-205ENST00000465727 NSD1Q96L73 2696 aaPredicted RBP12.79□□□□□ -0.36
SDF4-205ENST00000465727 SPRR1AP35321 89 aa12.78□□□□□ -0.36
SDF4-205ENST00000465727 DSCR10P59022 87 aa12.78□□□□□ -0.36
SDF4-205ENST00000465727 C1orf64Q8NEQ6 169 aa12.77□□□□□ -0.36
SDF4-205ENST00000465727 Q9BRP9 147 aa12.77□□□□□ -0.36
SDF4-205ENST00000465727 VWFP04275 2813 aa12.77□□□□□ -0.37
SDF4-205ENST00000465727 IGLV5-37A0A075B6J1 123 aa12.76□□□□□ -0.37
SDF4-205ENST00000465727 LINC01556Q5JQF7 62 aa12.76□□□□□ -0.37
SDF4-205ENST00000465727 IGKV2D-24A0A075B6R9 120 aa12.76□□□□□ -0.37
SDF4-205ENST00000465727 CYP4F30PQ9H0H9 118 aa12.76□□□□□ -0.37
SDF4-205ENST00000465727 IGLV1-50A0A075B6I6 118 aa12.74□□□□□ -0.37
SDF4-205ENST00000465727 V9GYY9 64 aa12.74□□□□□ -0.37
SDF4-205ENST00000465727 PRR15Q8IV56 129 aa12.74□□□□□ -0.37
SDF4-205ENST00000465727 K7EQZ3 153 aa12.73□□□□□ -0.37
SDF4-205ENST00000465727 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.73□□□□□ -0.37
SDF4-205ENST00000465727 HCG22E2RYF7 251 aa12.72□□□□□ -0.37
SDF4-205ENST00000465727 NDUFB1O75438 58 aa12.72□□□□□ -0.37
SDF4-205ENST00000465727 INAFM1C9JVW0 142 aa12.69□□□□□ -0.38
SDF4-205ENST00000465727 ST20-AS1Q8NBB2 130 aa12.69□□□□□ -0.38
SDF4-205ENST00000465727 RPL37AP8A6NKH3 93 aa12.69□□□□□ -0.38
SDF4-205ENST00000465727 LRCOL1A6NCL2 159 aa12.64□□□□□ -0.39
SDF4-205ENST00000465727 PSCAO43653 123 aa12.63□□□□□ -0.39
SDF4-205ENST00000465727 FAM168BA1KXE4 195 aa12.61□□□□□ -0.39
SDF4-205ENST00000465727 DNAH10OSP0CZ25 163 aa12.61□□□□□ -0.39
SDF4-205ENST00000465727 UBE2BP63146 152 aa12.61□□□□□ -0.39
SDF4-205ENST00000465727 MRPL55Q7Z7F7 128 aaKnown RBP12.61□□□□□ -0.39
SDF4-205ENST00000465727 TRAV22A0A0B4J277 110 aa12.61□□□□□ -0.39
SDF4-205ENST00000465727 MP68P56378 58 aa12.61□□□□□ -0.39
SDF4-205ENST00000465727 LINC00476Q8WZB0 136 aa12.61□□□□□ -0.39
SDF4-205ENST00000465727 KRTAP21-3Q3LHN1 58 aa12.58□□□□□ -0.4
SDF4-205ENST00000465727 KRTAP7-1Q8IUC3 87 aa12.58□□□□□ -0.4
SDF4-205ENST00000465727 REG3GQ6UW15 175 aa12.56□□□□□ -0.4
SDF4-205ENST00000465727 RETNQ9HD89 108 aa12.56□□□□□ -0.4
SDF4-205ENST00000465727 SEC61GP60059 68 aa12.55□□□□□ -0.4
SDF4-205ENST00000465727 H3BPC8 53 aa12.55□□□□□ -0.4
SDF4-205ENST00000465727 PSPHP1O15172 72 aa12.55□□□□□ -0.4
SDF4-205ENST00000465727 IGFL1Q6UW32 110 aa12.55□□□□□ -0.4
SDF4-205ENST00000465727 IGLV8-61A0A075B6I0 122 aa12.54□□□□□ -0.4
SDF4-205ENST00000465727 SPANXA2-OT1Q8N9U9 137 aa12.54□□□□□ -0.4
SDF4-205ENST00000465727 DEFB131BA0A096LNP1 70 aa12.53□□□□□ -0.4
SDF4-205ENST00000465727 PMAIP1Q13794 54 aa12.53□□□□□ -0.4
SDF4-205ENST00000465727 PRR4Q16378 134 aa12.52□□□□□ -0.4
SDF4-205ENST00000465727 B9D2Q9BPU9 175 aa12.52□□□□□ -0.4
SDF4-205ENST00000465727 WFDC13Q8IUB5 93 aa12.5□□□□□ -0.41
SDF4-205ENST00000465727 TENM1Q9UKZ4 2725 aa12.5□□□□□ -0.41
SDF4-205ENST00000465727 ATRQ13535 2644 aa12.49□□□□□ -0.41
SDF4-205ENST00000465727 KRTAP29-1A8MX34 341 aaPredicted RBP12.49□□□□□ -0.41
SDF4-205ENST00000465727 FBN1P35555 2871 aaKnown RBP12.48□□□□□ -0.41
SDF4-205ENST00000465727 LINC00208Q96KT6 92 aa12.48□□□□□ -0.41
SDF4-205ENST00000465727 A0A087WSZ3 146 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms