RNA–Protein interactions for RNA: ENST00000465582.5

SSBP1-205, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SSBP1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-205ENST00000465582 TOMM6Q96B49 74 aa4.22□□□□□ -1.73
SSBP1-205ENST00000465582 TMEM141Q96I45 108 aa4.22□□□□□ -1.73
SSBP1-205ENST00000465582 MRPL35Q9NZE8 188 aaKnown RBP4.22□□□□□ -1.73
SSBP1-205ENST00000465582 PYGO1Q9Y3Y4 419 aa4.22□□□□□ -1.73
SSBP1-205ENST00000465582 DYNC1H1Q14204 4646 aaKnown RBP4.21□□□□□ -1.74
SSBP1-205ENST00000465582 LOC107984640A0A0U1RRK4 108 aa4.21□□□□□ -1.74
SSBP1-205ENST00000465582 FAM236AA0A1B0GUQ0 79 aa4.21□□□□□ -1.74
SSBP1-205ENST00000465582 FAM236BA0A1B0GV22 79 aa4.21□□□□□ -1.74
SSBP1-205ENST00000465582 TINCRA0A1B0GVN0 87 aa4.21□□□□□ -1.74
SSBP1-205ENST00000465582 IGIPA6NJ69 53 aa4.21□□□□□ -1.74
SSBP1-205ENST00000465582 SS18Q15532 418 aa4.21□□□□□ -1.74
SSBP1-205ENST00000465582 HIGD2BQ4VC39 106 aa4.21□□□□□ -1.74
SSBP1-205ENST00000465582 CD164L2Q6UWJ8 174 aa4.21□□□□□ -1.74
SSBP1-205ENST00000465582 SCGB1D4Q6XE38 83 aa4.21□□□□□ -1.74
SSBP1-205ENST00000465582 C2orf48Q96LS8 159 aa4.21□□□□□ -1.74
SSBP1-205ENST00000465582 TIMM17AQ99595 171 aa4.21□□□□□ -1.74
SSBP1-205ENST00000465582 LAMTOR3Q9UHA4 124 aa4.21□□□□□ -1.74
SSBP1-205ENST00000465582 V9GYY9 64 aa4.21□□□□□ -1.74
SSBP1-205ENST00000465582 ZNF815PA8K554 130 aa4.2□□□□□ -1.74
SSBP1-205ENST00000465582 C14orf177Q52M58 125 aa4.2□□□□□ -1.74
SSBP1-205ENST00000465582 Q5XG85 94 aa4.2□□□□□ -1.74
SSBP1-205ENST00000465582 C2orf82Q6UX34 121 aa4.2□□□□□ -1.74
SSBP1-205ENST00000465582 SERP2Q8N6R1 65 aa4.2□□□□□ -1.74
SSBP1-205ENST00000465582 SCGB3A1Q96QR1 104 aa4.2□□□□□ -1.74
SSBP1-205ENST00000465582 AMELXQ99217 191 aa4.2□□□□□ -1.74
SSBP1-205ENST00000465582 LRP1BQ9NZR2 4599 aa4.2□□□□□ -1.74
SSBP1-205ENST00000465582 HERC1Q15751 4861 aa4.2□□□□□ -1.74
SSBP1-205ENST00000465582 KRTAP10-1P60331 282 aa4.19□□□□□ -1.74
SSBP1-205ENST00000465582 HAMPP81172 84 aa4.19□□□□□ -1.74
SSBP1-205ENST00000465582 COX6A2Q02221 97 aa4.19□□□□□ -1.74
SSBP1-205ENST00000465582 TTTY13Q9BZ97 58 aa4.19□□□□□ -1.74
SSBP1-205ENST00000465582 GVQW2A0A096LPI5 108 aaPredicted RBP4.18□□□□□ -1.74
SSBP1-205ENST00000465582 IGHV1-58A0A0C4DH39 117 aa4.18□□□□□ -1.74
SSBP1-205ENST00000465582 TEX49A0A1B0GTD5 131 aa4.18□□□□□ -1.74
SSBP1-205ENST00000465582 C11orf86A6NJI1 115 aa4.18□□□□□ -1.74
SSBP1-205ENST00000465582 COX7A2LO14548 114 aa4.18□□□□□ -1.74
SSBP1-205ENST00000465582 INAFM2P0DMQ5 153 aa4.18□□□□□ -1.74
SSBP1-205ENST00000465582 RPL18AQ02543 176 aaKnown RBP4.18□□□□□ -1.74
SSBP1-205ENST00000465582 C6orf226Q5I0X4 101 aa4.18□□□□□ -1.74
SSBP1-205ENST00000465582 LINC00242Q5T6M2 205 aa4.18□□□□□ -1.74
SSBP1-205ENST00000465582 SERP1Q9Y6X1 66 aa4.18□□□□□ -1.74
SSBP1-205ENST00000465582 A0A0J9YXV3 536 aa4.17□□□□□ -1.74
SSBP1-205ENST00000465582 LST1O00453 97 aa4.17□□□□□ -1.74
SSBP1-205ENST00000465582 IGKV2-30P06310 120 aa4.17□□□□□ -1.74
SSBP1-205ENST00000465582 SPAG11BQ08648 103 aa4.17□□□□□ -1.74
SSBP1-205ENST00000465582 APOBP04114 4563 aaKnown RBP4.16□□□□□ -1.74
SSBP1-205ENST00000465582 SMIM26A0A096LP01 95 aa4.16□□□□□ -1.74
SSBP1-205ENST00000465582 IGHV3OR16-9A0A0B4J2B5 98 aa4.16□□□□□ -1.74
SSBP1-205ENST00000465582 A0A0J9YXY3 114 aa4.16□□□□□ -1.74
SSBP1-205ENST00000465582 CDK2AP2O75956 126 aa4.16□□□□□ -1.74
SSBP1-205ENST00000465582 ATP5EP56381 51 aaPredicted RBP4.16□□□□□ -1.74
SSBP1-205ENST00000465582 NPC2P61916 151 aa4.16□□□□□ -1.74
SSBP1-205ENST00000465582 CNBPP62633 177 aaKnown RBP4.16□□□□□ -1.74
SSBP1-205ENST00000465582 FAM19A3Q7Z5A8 133 aa4.16□□□□□ -1.74
SSBP1-205ENST00000465582 KRTAP9-8Q9BYQ0 159 aa4.16□□□□□ -1.74
SSBP1-205ENST00000465582 IGLV4-69A0A075B6H9 119 aa4.15□□□□□ -1.75
SSBP1-205ENST00000465582 IGHV3-64A0A075B6Q5 118 aa4.15□□□□□ -1.75
SSBP1-205ENST00000465582 A0A087WZ39 114 aa4.15□□□□□ -1.75
SSBP1-205ENST00000465582 IGLV9-49A0A0B4J1Y8 123 aa4.15□□□□□ -1.75
SSBP1-205ENST00000465582 TMEM223A0PJW6 202 aa4.15□□□□□ -1.75
SSBP1-205ENST00000465582 J3QQQ9 107 aa4.15□□□□□ -1.75
SSBP1-205ENST00000465582 PFN2P35080 140 aa4.15□□□□□ -1.75
SSBP1-205ENST00000465582 ATP5EP2Q5VTU8 51 aa4.15□□□□□ -1.75
SSBP1-205ENST00000465582 Q6JHZ5 121 aa4.15□□□□□ -1.75
SSBP1-205ENST00000465582 HRCT1Q6UXD1 115 aa4.15□□□□□ -1.75
SSBP1-205ENST00000465582 Q6ZRU5 148 aa4.15□□□□□ -1.75
SSBP1-205ENST00000465582 CDKN2A-AS1Q9UH64 79 aa4.15□□□□□ -1.75
SSBP1-205ENST00000465582 HSPG2P98160 4391 aa4.15□□□□□ -1.75
SSBP1-205ENST00000465582 DNAH8Q96JB1 4490 aa4.15□□□□□ -1.75
SSBP1-205ENST00000465582 SMIM1B2RUZ4 78 aa4.14□□□□□ -1.75
SSBP1-205ENST00000465582 PANO1I0J062 215 aa4.14□□□□□ -1.75
SSBP1-205ENST00000465582 LEPROTO15243 131 aa4.14□□□□□ -1.75
SSBP1-205ENST00000465582 TIMM17BO60830 172 aa4.14□□□□□ -1.75
SSBP1-205ENST00000465582 CHTF8P0CG12 524 aa4.14□□□□□ -1.75
SSBP1-205ENST00000465582 C4orf26Q17RF5 130 aa4.14□□□□□ -1.75
SSBP1-205ENST00000465582 S100A7L2Q5SY68 101 aa4.14□□□□□ -1.75
SSBP1-205ENST00000465582 Q6ZSA8 131 aa4.14□□□□□ -1.75
SSBP1-205ENST00000465582 C9orf163Q8N9P6 203 aa4.14□□□□□ -1.75
SSBP1-205ENST00000465582 CAMK2N2Q96S95 79 aa4.14□□□□□ -1.75
SSBP1-205ENST00000465582 TOMM7Q9P0U1 55 aa4.14□□□□□ -1.75
SSBP1-205ENST00000465582 TRBV10-3A0A0K0K1G6 114 aa4.13□□□□□ -1.75
SSBP1-205ENST00000465582 hADV29S1A0JD25 119 aa4.13□□□□□ -1.75
SSBP1-205ENST00000465582 NDUFC1O43677 76 aa4.13□□□□□ -1.75
SSBP1-205ENST00000465582 ZNF22P17026 224 aaPredicted RBP4.13□□□□□ -1.75
SSBP1-205ENST00000465582 LGALS3P17931 250 aaKnown RBP4.13□□□□□ -1.75
SSBP1-205ENST00000465582 SYCNQ0VAF6 134 aa4.13□□□□□ -1.75
SSBP1-205ENST00000465582 KIAA0087Q14695 138 aa4.13□□□□□ -1.75
SSBP1-205ENST00000465582 C1orf195Q5TG92 126 aa4.13□□□□□ -1.75
SSBP1-205ENST00000465582 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
SSBP1-205ENST00000465582 VPS13BQ7Z7G8 4022 aa4.12□□□□□ -1.75
SSBP1-205ENST00000465582 A0A096LNI7 61 aa4.12□□□□□ -1.75
SSBP1-205ENST00000465582 IGKV2-24A0A0C4DH68 120 aa4.12□□□□□ -1.75
SSBP1-205ENST00000465582 NDUFA1O15239 70 aa4.12□□□□□ -1.75
SSBP1-205ENST00000465582 Q1RN00 199 aa4.12□□□□□ -1.75
SSBP1-205ENST00000465582 UNQ6190/PRO20217Q6UXQ8 127 aa4.12□□□□□ -1.75
SSBP1-205ENST00000465582 SCXQ7RTU7 201 aa4.12□□□□□ -1.75
SSBP1-205ENST00000465582 LINC01561Q8N1V8 128 aa4.12□□□□□ -1.75
SSBP1-205ENST00000465582 Q8IZM0 81 aa4.11□□□□□ -1.75
SSBP1-205ENST00000465582 SPACA4Q8TDM5 124 aa4.11□□□□□ -1.75
SSBP1-205ENST00000465582 COX7B2Q8TF08 81 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms