RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 LINC00528Q8N1L1 170 aa12.18□□□□□ -0.46
TSPAN4-210ENST00000464987 LOC110117498A0A087WWA1 95 aa12.17□□□□□ -0.46
TSPAN4-210ENST00000464987 USP17L23D6RBM5 183 aa12.17□□□□□ -0.46
TSPAN4-210ENST00000464987 TRBV7-6A0A0J9YX20 115 aa12.17□□□□□ -0.46
TSPAN4-210ENST00000464987 DNAH9Q9NYC9 4486 aa12.16□□□□□ -0.46
TSPAN4-210ENST00000464987 TMEM258P61165 79 aa12.16□□□□□ -0.46
TSPAN4-210ENST00000464987 DPH3Q96FX2 82 aa12.16□□□□□ -0.46
TSPAN4-210ENST00000464987 F8WDY8 70 aa12.15□□□□□ -0.46
TSPAN4-210ENST00000464987 DSCR8Q96T75 97 aa12.15□□□□□ -0.46
TSPAN4-210ENST00000464987 FAM168BA1KXE4 195 aa12.15□□□□□ -0.46
TSPAN4-210ENST00000464987 C7orf33Q8WU49 177 aa12.14□□□□□ -0.47
TSPAN4-210ENST00000464987 NKAPP1Q8N9T2 125 aa12.13□□□□□ -0.47
TSPAN4-210ENST00000464987 FAM19A1Q7Z5A9 133 aa12.13□□□□□ -0.47
TSPAN4-210ENST00000464987 UBL5Q9BZL1 73 aa12.13□□□□□ -0.47
TSPAN4-210ENST00000464987 CYSTM1Q9H1C7 97 aa12.11□□□□□ -0.47
TSPAN4-210ENST00000464987 DNHD1Q96M86 4753 aa12.11□□□□□ -0.47
TSPAN4-210ENST00000464987 RPL37AP8A6NKH3 93 aa12.1□□□□□ -0.47
TSPAN4-210ENST00000464987 TLX1NBP0CAT3 122 aa12.1□□□□□ -0.47
TSPAN4-210ENST00000464987 KRTAP7-1Q8IUC3 87 aa12.1□□□□□ -0.47
TSPAN4-210ENST00000464987 KCNQ1DNQ9H478 68 aa12.1□□□□□ -0.47
TSPAN4-210ENST00000464987 TRBV7-4A0A0J9YYF1 115 aa12.1□□□□□ -0.47
TSPAN4-210ENST00000464987 UPK3BQ9BT76 320 aa12.1□□□□□ -0.47
TSPAN4-210ENST00000464987 DNAH7Q8WXX0 4024 aa12.09□□□□□ -0.47
TSPAN4-210ENST00000464987 H3BQ85 93 aa12.09□□□□□ -0.47
TSPAN4-210ENST00000464987 STAB2Q8WWQ8 2551 aa12.08□□□□□ -0.47
TSPAN4-210ENST00000464987 SERP2Q8N6R1 65 aa12.07□□□□□ -0.48
TSPAN4-210ENST00000464987 OXTP01178 125 aa12.07□□□□□ -0.48
TSPAN4-210ENST00000464987 Q6ZVQ6 151 aa12.07□□□□□ -0.48
TSPAN4-210ENST00000464987 ATP5EP2Q5VTU8 51 aa12.06□□□□□ -0.48
TSPAN4-210ENST00000464987 CSMD3Q7Z407 3707 aa12.06□□□□□ -0.48
TSPAN4-210ENST00000464987 Q5XG85 94 aa12.06□□□□□ -0.48
TSPAN4-210ENST00000464987 KRTAP1-5Q9BYS1 174 aa12.06□□□□□ -0.48
TSPAN4-210ENST00000464987 PDE6GP18545 87 aa12.04□□□□□ -0.48
TSPAN4-210ENST00000464987 LINC01547P58512 204 aaPredicted RBP12.04□□□□□ -0.48
TSPAN4-210ENST00000464987 DEFB105AQ8NG35 78 aa12.04□□□□□ -0.48
TSPAN4-210ENST00000464987 HAMPP81172 84 aa12.03□□□□□ -0.48
TSPAN4-210ENST00000464987 C4orf26Q17RF5 130 aa12.03□□□□□ -0.48
TSPAN4-210ENST00000464987 PLA2G2DQ9UNK4 145 aa12.03□□□□□ -0.48
TSPAN4-210ENST00000464987 RMI2Q96E14 147 aa12.03□□□□□ -0.48
TSPAN4-210ENST00000464987 IGLV1-50A0A075B6I6 118 aa12.02□□□□□ -0.49
TSPAN4-210ENST00000464987 GHRHP01286 108 aa12.02□□□□□ -0.49
TSPAN4-210ENST00000464987 KRTAP4-16G5E9R7 235 aaPredicted RBP12.01□□□□□ -0.49
TSPAN4-210ENST00000464987 Q9BRP9 147 aa12.01□□□□□ -0.49
TSPAN4-210ENST00000464987 Q8N377 158 aa12.01□□□□□ -0.49
TSPAN4-210ENST00000464987 IGLV5-37A0A075B6J1 123 aa11.99□□□□□ -0.49
TSPAN4-210ENST00000464987 HRCT1Q6UXD1 115 aa11.99□□□□□ -0.49
TSPAN4-210ENST00000464987 Q6ZRX8 168 aa11.99□□□□□ -0.49
TSPAN4-210ENST00000464987 SCXQ7RTU7 201 aa11.98□□□□□ -0.49
TSPAN4-210ENST00000464987 TENM2Q9NT68 2774 aa11.97□□□□□ -0.49
TSPAN4-210ENST00000464987 SPRR1AP35321 89 aa11.97□□□□□ -0.49
TSPAN4-210ENST00000464987 DYNC2H1Q8NCM8 4307 aaKnown RBP11.97□□□□□ -0.49
TSPAN4-210ENST00000464987 PRYO14603 147 aa11.96□□□□□ -0.49
TSPAN4-210ENST00000464987 MRPL55Q7Z7F7 128 aaKnown RBP11.96□□□□□ -0.49
TSPAN4-210ENST00000464987 PLECQ15149 4684 aaKnown RBP11.96□□□□□ -0.5
TSPAN4-210ENST00000464987 ST20-AS1Q8NBB2 130 aa11.95□□□□□ -0.5
TSPAN4-210ENST00000464987 ETDCA0A1B0GVM5 59 aa11.94□□□□□ -0.5
TSPAN4-210ENST00000464987 ERC2-IT1O76042 136 aa11.93□□□□□ -0.5
TSPAN4-210ENST00000464987 DHRS4-AS1Q9P1J3 65 aa11.92□□□□□ -0.5
TSPAN4-210ENST00000464987 APLNQ9ULZ1 77 aa11.92□□□□□ -0.5
TSPAN4-210ENST00000464987 A0A096LNI7 61 aa11.91□□□□□ -0.5
TSPAN4-210ENST00000464987 IGKV2-24A0A0C4DH68 120 aa11.91□□□□□ -0.5
TSPAN4-210ENST00000464987 CXCL6P80162 114 aa11.91□□□□□ -0.5
TSPAN4-210ENST00000464987 C3orf84H3BNL1 204 aa11.9□□□□□ -0.5
TSPAN4-210ENST00000464987 UBE2DNLQ8IWF7 75 aa11.9□□□□□ -0.5
TSPAN4-210ENST00000464987 IGLV5-48A0A075B6I7 105 aa11.88□□□□□ -0.51
TSPAN4-210ENST00000464987 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.88□□□□□ -0.51
TSPAN4-210ENST00000464987 PSCAO43653 123 aa11.88□□□□□ -0.51
TSPAN4-210ENST00000464987 EPM2AB3EWF7 344 aa11.87□□□□□ -0.51
TSPAN4-210ENST00000464987 A0A1W2PNN7 141 aa11.87□□□□□ -0.51
TSPAN4-210ENST00000464987 UBE2BP63146 152 aa11.86□□□□□ -0.51
TSPAN4-210ENST00000464987 REG3GQ6UW15 175 aa11.86□□□□□ -0.51
TSPAN4-210ENST00000464987 Q8N9L7 120 aa11.86□□□□□ -0.51
TSPAN4-210ENST00000464987 PRO0628Q9UI54 55 aa11.86□□□□□ -0.51
TSPAN4-210ENST00000464987 TNP2Q05952 138 aa11.84□□□□□ -0.51
TSPAN4-210ENST00000464987 C16orf90A8MZG2 172 aa11.84□□□□□ -0.51
TSPAN4-210ENST00000464987 CNBPP62633 177 aaKnown RBP11.84□□□□□ -0.51
TSPAN4-210ENST00000464987 A0A1W2PNM2 257 aa11.83□□□□□ -0.52
TSPAN4-210ENST00000464987 STARD9Q9P2P6 4700 aa11.82□□□□□ -0.52
TSPAN4-210ENST00000464987 CHTF8P0CG12 524 aa11.82□□□□□ -0.52
TSPAN4-210ENST00000464987 B9D2Q9BPU9 175 aa11.82□□□□□ -0.52
TSPAN4-210ENST00000464987 NREPQ16612 68 aa11.82□□□□□ -0.52
TSPAN4-210ENST00000464987 PRLHP81277 87 aa11.8□□□□□ -0.52
TSPAN4-210ENST00000464987 C1orf137Q5JT78 98 aa11.8□□□□□ -0.52
TSPAN4-210ENST00000464987 SERP1Q9Y6X1 66 aa11.8□□□□□ -0.52
TSPAN4-210ENST00000464987 PRKDCP78527 4128 aaKnown RBP11.8□□□□□ -0.52
TSPAN4-210ENST00000464987 FAM236DA0A1B0GTK5 79 aa11.79□□□□□ -0.52
TSPAN4-210ENST00000464987 FAM236CP0DP71 79 aa11.79□□□□□ -0.52
TSPAN4-210ENST00000464987 KRTAP11-1Q8IUC1 163 aa11.79□□□□□ -0.52
TSPAN4-210ENST00000464987 FBN3Q75N90 2809 aa11.79□□□□□ -0.52
TSPAN4-210ENST00000464987 BPY2O14599 106 aa11.78□□□□□ -0.52
TSPAN4-210ENST00000464987 C20orf197Q8N268 126 aa11.78□□□□□ -0.52
TSPAN4-210ENST00000464987 SMIM29Q86T20 159 aa11.78□□□□□ -0.52
TSPAN4-210ENST00000464987 A0A0G2JQZ4 141 aa11.77□□□□□ -0.53
TSPAN4-210ENST00000464987 LINC00336Q6ZUF6 198 aa11.77□□□□□ -0.53
TSPAN4-210ENST00000464987 IGKV4-1P06312 121 aa11.76□□□□□ -0.53
TSPAN4-210ENST00000464987 SRRM2Q9UQ35 2752 aaKnown RBP11.76□□□□□ -0.53
TSPAN4-210ENST00000464987 TRAV7A0A075B6U4 112 aa11.75□□□□□ -0.53
TSPAN4-210ENST00000464987 FUSP35637 526 aaKnown RBP eCLIP11.75□□□□□ -0.53
TSPAN4-210ENST00000464987 PHF5AQ7RTV0 110 aaKnown RBP11.75□□□□□ -0.53
TSPAN4-210ENST00000464987 LRCOL1A6NCL2 159 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms