RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 H3BNG1 76 aa4.8□□□□□ -1.64
CLSTN1-204ENST00000464286 VPREB1P12018 145 aa4.8□□□□□ -1.64
CLSTN1-204ENST00000464286 C6orf48Q9UBA6 75 aa4.8□□□□□ -1.64
CLSTN1-204ENST00000464286 SPENQ96T58 3664 aaKnown RBP4.8□□□□□ -1.64
CLSTN1-204ENST00000464286 IGLV5-48A0A075B6I7 105 aa4.79□□□□□ -1.64
CLSTN1-204ENST00000464286 LCE6AA0A183 80 aa4.79□□□□□ -1.64
CLSTN1-204ENST00000464286 Q1T7F1 81 aa4.79□□□□□ -1.64
CLSTN1-204ENST00000464286 C10orf25Q5T742 122 aa4.79□□□□□ -1.64
CLSTN1-204ENST00000464286 SCXQ7RTU7 201 aa4.79□□□□□ -1.64
CLSTN1-204ENST00000464286 NKAPP1Q8N9T2 125 aa4.79□□□□□ -1.64
CLSTN1-204ENST00000464286 WFDC11Q8NEX6 87 aa4.79□□□□□ -1.64
CLSTN1-204ENST00000464286 WFDC10AQ9H1F0 79 aa4.79□□□□□ -1.64
CLSTN1-204ENST00000464286 A0A096LPF7 62 aa4.78□□□□□ -1.64
CLSTN1-204ENST00000464286 ETDCA0A1B0GVM5 59 aa4.78□□□□□ -1.64
CLSTN1-204ENST00000464286 J3QKU1 62 aa4.78□□□□□ -1.64
CLSTN1-204ENST00000464286 KRTAP21-3Q3LHN1 58 aa4.78□□□□□ -1.64
CLSTN1-204ENST00000464286 PRR15Q8IV56 129 aa4.78□□□□□ -1.64
CLSTN1-204ENST00000464286 Q8NDZ9 215 aa4.78□□□□□ -1.64
CLSTN1-204ENST00000464286 KCNQ1DNQ9H478 68 aa4.78□□□□□ -1.64
CLSTN1-204ENST00000464286 KLK12Q9UKR0 248 aa4.78□□□□□ -1.64
CLSTN1-204ENST00000464286 H3BPC8 53 aa4.77□□□□□ -1.65
CLSTN1-204ENST00000464286 M0R2N4 97 aa4.77□□□□□ -1.65
CLSTN1-204ENST00000464286 KPRPQ5T749 579 aaPredicted RBP4.77□□□□□ -1.65
CLSTN1-204ENST00000464286 CYP4F30PQ9H0H9 118 aa4.77□□□□□ -1.65
CLSTN1-204ENST00000464286 XAGE1AQ9HD64 81 aa4.77□□□□□ -1.65
CLSTN1-204ENST00000464286 PKIGQ9Y2B9 76 aa4.77□□□□□ -1.65
CLSTN1-204ENST00000464286 ATMQ13315 3056 aa4.76□□□□□ -1.65
CLSTN1-204ENST00000464286 hDV103S1A0JD37 113 aa4.76□□□□□ -1.65
CLSTN1-204ENST00000464286 MP68P56378 58 aa4.76□□□□□ -1.65
CLSTN1-204ENST00000464286 Q6ZTC4 211 aa4.76□□□□□ -1.65
CLSTN1-204ENST00000464286 MPLKIPQ8TAP9 179 aa4.76□□□□□ -1.65
CLSTN1-204ENST00000464286 LINC00474Q9P2X8 69 aa4.76□□□□□ -1.65
CLSTN1-204ENST00000464286 BSNQ9UPA5 3926 aa4.75□□□□□ -1.65
CLSTN1-204ENST00000464286 KRTAP1-1Q07627 177 aa4.75□□□□□ -1.65
CLSTN1-204ENST00000464286 Q8NBF4 154 aa4.75□□□□□ -1.65
CLSTN1-204ENST00000464286 TLX1NBP0CAT3 122 aa4.74□□□□□ -1.65
CLSTN1-204ENST00000464286 MRPL55Q7Z7F7 128 aaKnown RBP4.74□□□□□ -1.65
CLSTN1-204ENST00000464286 HIGD2AQ9BW72 106 aa4.74□□□□□ -1.65
CLSTN1-204ENST00000464286 KRTAP9-8Q9BYQ0 159 aa4.74□□□□□ -1.65
CLSTN1-204ENST00000464286 COL12A1Q99715 3063 aa4.74□□□□□ -1.65
CLSTN1-204ENST00000464286 SETD2Q9BYW2 2564 aaPredicted RBP4.73□□□□□ -1.65
CLSTN1-204ENST00000464286 IGLV5-37A0A075B6J1 123 aa4.73□□□□□ -1.65
CLSTN1-204ENST00000464286 SYCNQ0VAF6 134 aa4.73□□□□□ -1.65
CLSTN1-204ENST00000464286 DEFB135Q30KP9 77 aa4.73□□□□□ -1.65
CLSTN1-204ENST00000464286 C1orf137Q5JT78 98 aa4.73□□□□□ -1.65
CLSTN1-204ENST00000464286 SPRR4Q96PI1 79 aa4.73□□□□□ -1.65
CLSTN1-204ENST00000464286 WNK1Q9H4A3 2382 aa4.72□□□□□ -1.65
CLSTN1-204ENST00000464286 NOTCH3Q9UM47 2321 aa4.72□□□□□ -1.65
CLSTN1-204ENST00000464286 RPL37AP8A6NKH3 93 aa4.72□□□□□ -1.65
CLSTN1-204ENST00000464286 HCG22E2RYF7 251 aa4.72□□□□□ -1.65
CLSTN1-204ENST00000464286 C3orf84H3BNL1 204 aa4.72□□□□□ -1.65
CLSTN1-204ENST00000464286 SEC61GP60059 68 aa4.72□□□□□ -1.65
CLSTN1-204ENST00000464286 Q6ZRU5 148 aa4.72□□□□□ -1.65
CLSTN1-204ENST00000464286 Q6ZRX8 168 aa4.72□□□□□ -1.65
CLSTN1-204ENST00000464286 SMIM29Q86T20 159 aa4.72□□□□□ -1.65
CLSTN1-204ENST00000464286 SPANXA2-OT1Q8N9U9 137 aa4.72□□□□□ -1.65
CLSTN1-204ENST00000464286 Q8NAQ8 132 aa4.72□□□□□ -1.65
CLSTN1-204ENST00000464286 HTN3P15516 51 aa4.71□□□□□ -1.66
CLSTN1-204ENST00000464286 PMAIP1Q13794 54 aa4.71□□□□□ -1.66
CLSTN1-204ENST00000464286 Q8N377 158 aa4.71□□□□□ -1.66
CLSTN1-204ENST00000464286 ZCCHC13Q8WW36 166 aaKnown RBP4.71□□□□□ -1.66
CLSTN1-204ENST00000464286 LIMD2Q9BT23 127 aa4.71□□□□□ -1.66
CLSTN1-204ENST00000464286 FAM30AQ9NZY2 134 aa4.71□□□□□ -1.66
CLSTN1-204ENST00000464286 UBE2BP63146 152 aa4.7□□□□□ -1.66
CLSTN1-204ENST00000464286 LINC01556Q5JQF7 62 aa4.7□□□□□ -1.66
CLSTN1-204ENST00000464286 Q8N9L7 120 aa4.7□□□□□ -1.66
CLSTN1-204ENST00000464286 C1orf64Q8NEQ6 169 aa4.7□□□□□ -1.66
CLSTN1-204ENST00000464286 DEFB105AQ8NG35 78 aa4.7□□□□□ -1.66
CLSTN1-204ENST00000464286 TLN2Q9Y4G6 2542 aa4.69□□□□□ -1.66
CLSTN1-204ENST00000464286 SPRR1AP35321 89 aa4.69□□□□□ -1.66
CLSTN1-204ENST00000464286 UBE2AP49459 152 aa4.69□□□□□ -1.66
CLSTN1-204ENST00000464286 C15orf56Q8N910 161 aa4.69□□□□□ -1.66
CLSTN1-204ENST00000464286 C7orf33Q8WU49 177 aa4.69□□□□□ -1.66
CLSTN1-204ENST00000464286 LINC00476Q8WZB0 136 aa4.69□□□□□ -1.66
CLSTN1-204ENST00000464286 KRTAP10-9P60411 292 aa4.68□□□□□ -1.66
CLSTN1-204ENST00000464286 FAM229BQ4G0N7 80 aa4.68□□□□□ -1.66
CLSTN1-204ENST00000464286 USP9YO00507 2555 aaPredicted RBP4.67□□□□□ -1.66
CLSTN1-204ENST00000464286 A0A1W2PNM2 257 aa4.67□□□□□ -1.66
CLSTN1-204ENST00000464286 KRTAP26-1Q6PEX3 210 aa4.67□□□□□ -1.66
CLSTN1-204ENST00000464286 Q6ZRP5 223 aa4.67□□□□□ -1.66
CLSTN1-204ENST00000464286 B9D2Q9BPU9 175 aa4.67□□□□□ -1.66
CLSTN1-204ENST00000464286 Q9BRP9 147 aa4.67□□□□□ -1.66
CLSTN1-204ENST00000464286 IGLV1-50A0A075B6I6 118 aa4.66□□□□□ -1.66
CLSTN1-204ENST00000464286 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.66□□□□□ -1.66
CLSTN1-204ENST00000464286 IGKV2D-24A0A075B6R9 120 aa4.66□□□□□ -1.66
CLSTN1-204ENST00000464286 DEFB4AO15263 64 aa4.66□□□□□ -1.66
CLSTN1-204ENST00000464286 PSCAO43653 123 aa4.66□□□□□ -1.66
CLSTN1-204ENST00000464286 CSMD1Q96PZ7 3565 aa4.66□□□□□ -1.66
CLSTN1-204ENST00000464286 TRAV22A0A0B4J277 110 aa4.65□□□□□ -1.67
CLSTN1-204ENST00000464286 DSCR10P59022 87 aa4.65□□□□□ -1.67
CLSTN1-204ENST00000464286 F8P00451 2351 aa4.65□□□□□ -1.67
CLSTN1-204ENST00000464286 MAP1AP78559 2803 aaPredicted RBP4.64□□□□□ -1.67
CLSTN1-204ENST00000464286 IGLV8-61A0A075B6I0 122 aa4.64□□□□□ -1.67
CLSTN1-204ENST00000464286 KRTAP4-16G5E9R7 235 aaPredicted RBP4.64□□□□□ -1.67
CLSTN1-204ENST00000464286 CD164Q04900 197 aa4.64□□□□□ -1.67
CLSTN1-204ENST00000464286 WFDC10BQ8IUB3 73 aa4.64□□□□□ -1.67
CLSTN1-204ENST00000464286 LINC00208Q96KT6 92 aa4.64□□□□□ -1.67
CLSTN1-204ENST00000464286 LRRK2Q5S007 2527 aa4.64□□□□□ -1.67
CLSTN1-204ENST00000464286 K7EQZ3 153 aa4.63□□□□□ -1.67
CLSTN1-204ENST00000464286 NDUFS5O43920 106 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms