RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 HIST1H2BJP06899 126 aa11.62□□□□□ -0.55
PDLIM4-205ENST00000463615 HIST1H2BOP23527 126 aa11.62□□□□□ -0.55
PDLIM4-205ENST00000463615 HIST1H2BBP33778 126 aa11.62□□□□□ -0.55
PDLIM4-205ENST00000463615 HIST1H2BDP58876 126 aa11.62□□□□□ -0.55
PDLIM4-205ENST00000463615 HIST1H2BCP62807 126 aa11.62□□□□□ -0.55
PDLIM4-205ENST00000463615 JOSD1Q15040 202 aaPredicted RBP11.62□□□□□ -0.55
PDLIM4-205ENST00000463615 HIST2H2BEQ16778 126 aa11.62□□□□□ -0.55
PDLIM4-205ENST00000463615 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.62□□□□□ -0.55
PDLIM4-205ENST00000463615 HIST1H2BHQ93079 126 aa11.62□□□□□ -0.55
PDLIM4-205ENST00000463615 HIST1H2BNQ99877 126 aa11.62□□□□□ -0.55
PDLIM4-205ENST00000463615 HIST1H2BMQ99879 126 aa11.62□□□□□ -0.55
PDLIM4-205ENST00000463615 C5orf52A6NGY3 159 aa11.61□□□□□ -0.55
PDLIM4-205ENST00000463615 LITAFQ99732 161 aa11.61□□□□□ -0.55
PDLIM4-205ENST00000463615 ZNF73O43830 326 aaPredicted RBP11.6□□□□□ -0.55
PDLIM4-205ENST00000463615 KRTAP13-3Q3SY46 172 aa11.6□□□□□ -0.55
PDLIM4-205ENST00000463615 LCE2AQ5TA79 106 aaPredicted RBP11.6□□□□□ -0.55
PDLIM4-205ENST00000463615 LINC01545Q5VT33 79 aa11.6□□□□□ -0.55
PDLIM4-205ENST00000463615 CBY1Q9Y3M2 126 aa11.6□□□□□ -0.55
PDLIM4-205ENST00000463615 TIMM17BO60830 172 aa11.59□□□□□ -0.55
PDLIM4-205ENST00000463615 MOBPQ13875 183 aa11.59□□□□□ -0.55
PDLIM4-205ENST00000463615 PET117Q6UWS5 81 aa11.58□□□□□ -0.56
PDLIM4-205ENST00000463615 IGLV9-49A0A0B4J1Y8 123 aa11.57□□□□□ -0.56
PDLIM4-205ENST00000463615 SPANXCQ9NY87 97 aa11.57□□□□□ -0.56
PDLIM4-205ENST00000463615 NPC2P61916 151 aa11.56□□□□□ -0.56
PDLIM4-205ENST00000463615 LINC00308Q8TCZ7 52 aa11.56□□□□□ -0.56
PDLIM4-205ENST00000463615 Q8N377 158 aa11.55□□□□□ -0.56
PDLIM4-205ENST00000463615 HINT1P49773 126 aaPredicted RBP11.53□□□□□ -0.56
PDLIM4-205ENST00000463615 SLC25A20O43772 301 aa11.52□□□□□ -0.57
PDLIM4-205ENST00000463615 SPRR1BP22528 89 aa11.51□□□□□ -0.57
PDLIM4-205ENST00000463615 ASB16-AS1Q495Z4 193 aa11.51□□□□□ -0.57
PDLIM4-205ENST00000463615 COA6Q5JTJ3 125 aaKnown RBP11.51□□□□□ -0.57
PDLIM4-205ENST00000463615 SPANXDQ9BXN6 97 aa11.51□□□□□ -0.57
PDLIM4-205ENST00000463615 ST20-AS1Q8NBB2 130 aa11.5□□□□□ -0.57
PDLIM4-205ENST00000463615 ZNF815PA8K554 130 aa11.49□□□□□ -0.57
PDLIM4-205ENST00000463615 C3orf79P0CE67 100 aa11.48□□□□□ -0.57
PDLIM4-205ENST00000463615 DHRS4-AS1Q9P1J3 65 aa11.48□□□□□ -0.57
PDLIM4-205ENST00000463615 LINC00518Q8N0U6 118 aa11.47□□□□□ -0.57
PDLIM4-205ENST00000463615 C9orf153Q5TBE3 101 aa11.46□□□□□ -0.57
PDLIM4-205ENST00000463615 OR13C6PQ8NH95 151 aa11.46□□□□□ -0.57
PDLIM4-205ENST00000463615 TTTY13Q9BZ97 58 aa11.45□□□□□ -0.58
PDLIM4-205ENST00000463615 ELOF1P60002 83 aaKnown RBP11.44□□□□□ -0.58
PDLIM4-205ENST00000463615 SLC25A34Q6PIV7 304 aa11.44□□□□□ -0.58
PDLIM4-205ENST00000463615 SEC61BP60468 96 aaKnown RBP11.42□□□□□ -0.58
PDLIM4-205ENST00000463615 TRBV7-6A0A0J9YX20 115 aa11.4□□□□□ -0.58
PDLIM4-205ENST00000463615 COX7BP24311 80 aa11.4□□□□□ -0.58
PDLIM4-205ENST00000463615 KRTDAPP60985 99 aa11.4□□□□□ -0.58
PDLIM4-205ENST00000463615 XP32Q5T750 250 aa11.4□□□□□ -0.58
PDLIM4-205ENST00000463615 C6orf99Q4VX62 202 aa11.39□□□□□ -0.59
PDLIM4-205ENST00000463615 COPS9Q8WXC6 57 aa11.39□□□□□ -0.59
PDLIM4-205ENST00000463615 IFITM1P13164 125 aa11.38□□□□□ -0.59
PDLIM4-205ENST00000463615 Q6ZVH6 145 aa11.38□□□□□ -0.59
PDLIM4-205ENST00000463615 LAMTOR3Q9UHA4 124 aa11.38□□□□□ -0.59
PDLIM4-205ENST00000463615 C20orf202A1L168 122 aa11.37□□□□□ -0.59
PDLIM4-205ENST00000463615 SCGB1D4Q6XE38 83 aa11.37□□□□□ -0.59
PDLIM4-205ENST00000463615 KRTAP9-2Q9BYQ4 174 aa11.37□□□□□ -0.59
PDLIM4-205ENST00000463615 AKR1D1P51857 326 aa11.36□□□□□ -0.59
PDLIM4-205ENST00000463615 ANKRD39Q53RE8 183 aa11.36□□□□□ -0.59
PDLIM4-205ENST00000463615 LIMD2Q9BT23 127 aa11.36□□□□□ -0.59
PDLIM4-205ENST00000463615 KRTAP4-1Q9BYQ7 146 aa11.36□□□□□ -0.59
PDLIM4-205ENST00000463615 CD164Q04900 197 aa11.34□□□□□ -0.59
PDLIM4-205ENST00000463615 TEX49A0A1B0GTD5 131 aa11.32□□□□□ -0.6
PDLIM4-205ENST00000463615 A0A1B0GWB2 263 aa11.32□□□□□ -0.6
PDLIM4-205ENST00000463615 TAL2Q16559 108 aa11.3□□□□□ -0.6
PDLIM4-205ENST00000463615 IGLV5-48A0A075B6I7 105 aa11.29□□□□□ -0.6
PDLIM4-205ENST00000463615 SNRPEP62304 92 aaKnown RBP11.29□□□□□ -0.6
PDLIM4-205ENST00000463615 PCP2Q8IVA1 136 aa11.29□□□□□ -0.6
PDLIM4-205ENST00000463615 A4D1N5 150 aa11.28□□□□□ -0.6
PDLIM4-205ENST00000463615 LINC01547P58512 204 aaPredicted RBP11.28□□□□□ -0.6
PDLIM4-205ENST00000463615 Q5XG85 94 aa11.28□□□□□ -0.6
PDLIM4-205ENST00000463615 SMIM29Q86T20 159 aa11.28□□□□□ -0.6
PDLIM4-205ENST00000463615 MUSTN1Q8IVN3 82 aa11.28□□□□□ -0.6
PDLIM4-205ENST00000463615 ATOH7Q8N100 152 aa11.28□□□□□ -0.6
PDLIM4-205ENST00000463615 PRO1933Q9H354 126 aa11.28□□□□□ -0.6
PDLIM4-205ENST00000463615 A6NDN8 102 aa11.26□□□□□ -0.61
PDLIM4-205ENST00000463615 Q1RN00 199 aa11.26□□□□□ -0.61
PDLIM4-205ENST00000463615 HRCT1Q6UXD1 115 aa11.26□□□□□ -0.61
PDLIM4-205ENST00000463615 DEFB105AQ8NG35 78 aa11.25□□□□□ -0.61
PDLIM4-205ENST00000463615 TRAV13-2A0A0B4J235 113 aa11.24□□□□□ -0.61
PDLIM4-205ENST00000463615 H7C2G1 150 aa11.22□□□□□ -0.61
PDLIM4-205ENST00000463615 NHP2Q9NX24 153 aaKnown RBP11.22□□□□□ -0.61
PDLIM4-205ENST00000463615 SMIM11BQ8TCY0 68 aa11.2□□□□□ -0.62
PDLIM4-205ENST00000463615 HIST3H2BBQ8N257 126 aa11.17□□□□□ -0.62
PDLIM4-205ENST00000463615 HIST1H2BLQ99880 126 aa11.17□□□□□ -0.62
PDLIM4-205ENST00000463615 C1orf195Q5TG92 126 aa11.15□□□□□ -0.62
PDLIM4-205ENST00000463615 C9orf92A6NGG3 77 aa11.13□□□□□ -0.63
PDLIM4-205ENST00000463615 LCE2CQ5TA81 110 aa11.13□□□□□ -0.63
PDLIM4-205ENST00000463615 VAMP3Q15836 100 aa11.12□□□□□ -0.63
PDLIM4-205ENST00000463615 PCOTHQ58A44 107 aa11.12□□□□□ -0.63
PDLIM4-205ENST00000463615 HSBP1L1C9JCN9 74 aa11.11□□□□□ -0.63
PDLIM4-205ENST00000463615 S100A2P29034 98 aa11.11□□□□□ -0.63
PDLIM4-205ENST00000463615 KRTAP19-2Q3LHN2 52 aa11.11□□□□□ -0.63
PDLIM4-205ENST00000463615 LINC00575Q6W349 94 aa11.11□□□□□ -0.63
PDLIM4-205ENST00000463615 A0A0G2JQZ4 141 aa11.1□□□□□ -0.63
PDLIM4-205ENST00000463615 IGLV8-61A0A075B6I0 122 aa11.06□□□□□ -0.64
PDLIM4-205ENST00000463615 TCL1BO95988 128 aa11.06□□□□□ -0.64
PDLIM4-205ENST00000463615 hADV29S1A0JD25 119 aa11.05□□□□□ -0.64
PDLIM4-205ENST00000463615 F8WEM9 126 aa11.05□□□□□ -0.64
PDLIM4-205ENST00000463615 Q6ZQY7 126 aa11.04□□□□□ -0.64
PDLIM4-205ENST00000463615 KRTAP9-6A0A140TA67 174 aa11.03□□□□□ -0.64
PDLIM4-205ENST00000463615 Q6JHZ5 121 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms