RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 IGKV2-28A0A075B6P5 120 aa11.47□□□□□ -0.57
VARS-221ENST00000463184 NCR3O14931 201 aa11.47□□□□□ -0.57
VARS-221ENST00000463184 EIF4EBP3O60516 100 aaPredicted RBP11.47□□□□□ -0.57
VARS-221ENST00000463184 IGKV2D-28P01615 120 aa11.47□□□□□ -0.57
VARS-221ENST00000463184 PYY3Q5JQD4 70 aa11.47□□□□□ -0.57
VARS-221ENST00000463184 Q6ZVH6 145 aa11.47□□□□□ -0.57
VARS-221ENST00000463184 VAMP8Q9BV40 100 aa11.47□□□□□ -0.57
VARS-221ENST00000463184 TRBV10-2A0A0K0K1G8 114 aa11.46□□□□□ -0.57
VARS-221ENST00000463184 COX8AP10176 69 aa11.46□□□□□ -0.57
VARS-221ENST00000463184 SPATA45Q537H7 98 aa11.46□□□□□ -0.57
VARS-221ENST00000463184 PAM16Q9Y3D7 125 aa11.46□□□□□ -0.57
VARS-221ENST00000463184 COPS9Q8WXC6 57 aa11.45□□□□□ -0.58
VARS-221ENST00000463184 SPANXB1Q9NS25 103 aaPredicted RBP11.45□□□□□ -0.58
VARS-221ENST00000463184 IGLV7-46A0A075B6I9 117 aa11.44□□□□□ -0.58
VARS-221ENST00000463184 IFITM1P13164 125 aa11.44□□□□□ -0.58
VARS-221ENST00000463184 DLEU1O43261 78 aa11.43□□□□□ -0.58
VARS-221ENST00000463184 PPDPFQ9H3Y8 114 aa11.43□□□□□ -0.58
VARS-221ENST00000463184 C14orf144Q96I85 54 aa11.41□□□□□ -0.58
VARS-221ENST00000463184 MUC17Q685J3 4493 aa11.41□□□□□ -0.58
VARS-221ENST00000463184 TRBV10-3A0A0K0K1G6 114 aa11.4□□□□□ -0.58
VARS-221ENST00000463184 PRLHP81277 87 aa11.4□□□□□ -0.58
VARS-221ENST00000463184 FAM19A1Q7Z5A9 133 aa11.4□□□□□ -0.58
VARS-221ENST00000463184 MUSTN1Q8IVN3 82 aa11.4□□□□□ -0.58
VARS-221ENST00000463184 TMEM126AQ9H061 195 aa11.4□□□□□ -0.58
VARS-221ENST00000463184 DDTP30046 118 aa11.39□□□□□ -0.59
VARS-221ENST00000463184 KCNQ1DNQ9H478 68 aa11.39□□□□□ -0.59
VARS-221ENST00000463184 PRYO14603 147 aa11.38□□□□□ -0.59
VARS-221ENST00000463184 S100A12P80511 92 aa11.38□□□□□ -0.59
VARS-221ENST00000463184 S100A7L2Q5SY68 101 aa11.38□□□□□ -0.59
VARS-221ENST00000463184 LINC00518Q8N0U6 118 aa11.38□□□□□ -0.59
VARS-221ENST00000463184 IGLV6-57P01721 117 aa11.37□□□□□ -0.59
VARS-221ENST00000463184 SLC25A34Q6PIV7 304 aa11.37□□□□□ -0.59
VARS-221ENST00000463184 KRTAP9-6A0A140TA67 174 aa11.36□□□□□ -0.59
VARS-221ENST00000463184 SPAG11AQ6PDA7 123 aa11.34□□□□□ -0.59
VARS-221ENST00000463184 HIGD1BQ9P298 99 aa11.34□□□□□ -0.59
VARS-221ENST00000463184 SPRR1AP35321 89 aa11.33□□□□□ -0.6
VARS-221ENST00000463184 C3orf22Q8N5N4 141 aa11.33□□□□□ -0.6
VARS-221ENST00000463184 OR13C6PQ8NH95 151 aa11.33□□□□□ -0.6
VARS-221ENST00000463184 CBY1Q9Y3M2 126 aa11.33□□□□□ -0.6
VARS-221ENST00000463184 LINC00337Q8N6G1 96 aa11.32□□□□□ -0.6
VARS-221ENST00000463184 HIST1H4GQ99525 98 aa11.32□□□□□ -0.6
VARS-221ENST00000463184 TRAV23DV6A0A075B6W5 121 aa11.3□□□□□ -0.6
VARS-221ENST00000463184 ETDCA0A1B0GVM5 59 aa11.29□□□□□ -0.6
VARS-221ENST00000463184 KRTAP4-16G5E9R7 235 aaPredicted RBP11.29□□□□□ -0.6
VARS-221ENST00000463184 C2orf91Q6ZV80 131 aa11.29□□□□□ -0.6
VARS-221ENST00000463184 FP248Q71RG6 208 aaPredicted RBP11.29□□□□□ -0.6
VARS-221ENST00000463184 HIGD2AQ9BW72 106 aa11.29□□□□□ -0.6
VARS-221ENST00000463184 A4D1N5 150 aa11.27□□□□□ -0.61
VARS-221ENST00000463184 C4orf48Q5BLP8 95 aa11.27□□□□□ -0.61
VARS-221ENST00000463184 TRAV13-2A0A0B4J235 113 aa11.26□□□□□ -0.61
VARS-221ENST00000463184 ZNF73O43830 326 aaPredicted RBP11.26□□□□□ -0.61
VARS-221ENST00000463184 SPRR4Q96PI1 79 aa11.26□□□□□ -0.61
VARS-221ENST00000463184 A6NDN8 102 aa11.25□□□□□ -0.61
VARS-221ENST00000463184 B5MCH6 92 aa11.25□□□□□ -0.61
VARS-221ENST00000463184 LOC105371267A0A1B0GV96 52 aa11.24□□□□□ -0.61
VARS-221ENST00000463184 SMIM6P0DI80 62 aa11.24□□□□□ -0.61
VARS-221ENST00000463184 TAL2Q16559 108 aa11.24□□□□□ -0.61
VARS-221ENST00000463184 UQCR10Q9UDW1 63 aa11.24□□□□□ -0.61
VARS-221ENST00000463184 ZNF706Q9Y5V0 76 aaPredicted RBP11.24□□□□□ -0.61
VARS-221ENST00000463184 HINT1P49773 126 aaPredicted RBP11.23□□□□□ -0.61
VARS-221ENST00000463184 Q6ZRX8 168 aa11.21□□□□□ -0.61
VARS-221ENST00000463184 KRTAP13-3Q3SY46 172 aa11.2□□□□□ -0.62
VARS-221ENST00000463184 ASB16-AS1Q495Z4 193 aa11.2□□□□□ -0.62
VARS-221ENST00000463184 CEND1Q8N111 149 aa11.19□□□□□ -0.62
VARS-221ENST00000463184 SMCR5Q8TEV8 140 aa11.19□□□□□ -0.62
VARS-221ENST00000463184 C6orf99Q4VX62 202 aa11.18□□□□□ -0.62
VARS-221ENST00000463184 Q8NBF4 154 aa11.18□□□□□ -0.62
VARS-221ENST00000463184 SPINK1P00995 79 aa11.17□□□□□ -0.62
VARS-221ENST00000463184 C12orf57Q99622 126 aa11.17□□□□□ -0.62
VARS-221ENST00000463184 TRBV7-6A0A0J9YX20 115 aa11.16□□□□□ -0.62
VARS-221ENST00000463184 LINC01547P58512 204 aaPredicted RBP11.16□□□□□ -0.62
VARS-221ENST00000463184 HSD52Q0P140 79 aa11.16□□□□□ -0.62
VARS-221ENST00000463184 Q9BRP9 147 aa11.16□□□□□ -0.62
VARS-221ENST00000463184 COX7BP24311 80 aa11.15□□□□□ -0.62
VARS-221ENST00000463184 SMIM11BQ8TCY0 68 aa11.15□□□□□ -0.62
VARS-221ENST00000463184 TMEM238LA0A1B0GVL6 79 aa11.14□□□□□ -0.63
VARS-221ENST00000463184 A6NJY4 79 aa11.14□□□□□ -0.63
VARS-221ENST00000463184 CFC1BP0CG36 223 aa11.14□□□□□ -0.63
VARS-221ENST00000463184 CFC1P0CG37 223 aa11.14□□□□□ -0.63
VARS-221ENST00000463184 ELOF1P60002 83 aaKnown RBP11.14□□□□□ -0.63
VARS-221ENST00000463184 PRO1933Q9H354 126 aa11.14□□□□□ -0.63
VARS-221ENST00000463184 A0A0B4J2C4 111 aa11.13□□□□□ -0.63
VARS-221ENST00000463184 SEC61BP60468 96 aaKnown RBP11.13□□□□□ -0.63
VARS-221ENST00000463184 RAB37Q96AX2 223 aa11.13□□□□□ -0.63
VARS-221ENST00000463184 A0A1B0GWB2 263 aa11.12□□□□□ -0.63
VARS-221ENST00000463184 ERC2-IT1O76042 136 aa11.12□□□□□ -0.63
VARS-221ENST00000463184 FXYD2P54710 66 aa11.12□□□□□ -0.63
VARS-221ENST00000463184 DHRS4-AS1Q9P1J3 65 aa11.12□□□□□ -0.63
VARS-221ENST00000463184 LINC00483Q53H64 154 aa11.1□□□□□ -0.63
VARS-221ENST00000463184 KRTAP4-1Q9BYQ7 146 aa11.09□□□□□ -0.63
VARS-221ENST00000463184 RPS29P62273 56 aaKnown RBP11.08□□□□□ -0.64
VARS-221ENST00000463184 VAMP3Q15836 100 aa11.08□□□□□ -0.64
VARS-221ENST00000463184 LCE2DQ5TA82 110 aaPredicted RBP11.08□□□□□ -0.64
VARS-221ENST00000463184 GAGE2AQ6NT46 116 aa11.06□□□□□ -0.64
VARS-221ENST00000463184 SSBP3-AS1Q7Z2R9 100 aa11.06□□□□□ -0.64
VARS-221ENST00000463184 PRO1854Q9UHT4 67 aa11.06□□□□□ -0.64
VARS-221ENST00000463184 H7C2G1 150 aa11.05□□□□□ -0.64
VARS-221ENST00000463184 TSTD3H0UI37 97 aa11.04□□□□□ -0.64
VARS-221ENST00000463184 Q8N377 158 aa11.04□□□□□ -0.64
VARS-221ENST00000463184 NHP2Q9NX24 153 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms