RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 B5MCH6 92 aa11.06□□□□□ -0.64
COL9A3-203ENST00000462700 SCGB1D4Q6XE38 83 aa11.06□□□□□ -0.64
COL9A3-203ENST00000462700 SPRR4Q96PI1 79 aa11.06□□□□□ -0.64
COL9A3-203ENST00000462700 LRP2P98164 4655 aa11.06□□□□□ -0.64
COL9A3-203ENST00000462700 TRAV23DV6A0A075B6W5 121 aa11.05□□□□□ -0.64
COL9A3-203ENST00000462700 SMCR5Q8TEV8 140 aa11.05□□□□□ -0.64
COL9A3-203ENST00000462700 ZNF706Q9Y5V0 76 aaPredicted RBP11.05□□□□□ -0.64
COL9A3-203ENST00000462700 SNRPEP62304 92 aaKnown RBP11.04□□□□□ -0.64
COL9A3-203ENST00000462700 SPANXDQ9BXN6 97 aa11.04□□□□□ -0.64
COL9A3-203ENST00000462700 PCP2Q8IVA1 136 aa11.03□□□□□ -0.64
COL9A3-203ENST00000462700 Q6ZRX8 168 aa11.02□□□□□ -0.65
COL9A3-203ENST00000462700 ZNF73O43830 326 aaPredicted RBP11.01□□□□□ -0.65
COL9A3-203ENST00000462700 TSPAN13O95857 204 aa11□□□□□ -0.65
COL9A3-203ENST00000462700 C3orf22Q8N5N4 141 aa11□□□□□ -0.65
COL9A3-203ENST00000462700 Q9BRP9 147 aa11□□□□□ -0.65
COL9A3-203ENST00000462700 CBY1Q9Y3M2 126 aa11□□□□□ -0.65
COL9A3-203ENST00000462700 OR13C6PQ8NH95 151 aa10.99□□□□□ -0.65
COL9A3-203ENST00000462700 C5orf52A6NGY3 159 aa10.98□□□□□ -0.65
COL9A3-203ENST00000462700 ERC2-IT1O76042 136 aa10.98□□□□□ -0.65
COL9A3-203ENST00000462700 LINC00304Q8N9R0 145 aa10.98□□□□□ -0.65
COL9A3-203ENST00000462700 IFITM1P13164 125 aa10.97□□□□□ -0.65
COL9A3-203ENST00000462700 JOSD1Q15040 202 aaPredicted RBP10.97□□□□□ -0.65
COL9A3-203ENST00000462700 Q6ZVH6 145 aa10.97□□□□□ -0.65
COL9A3-203ENST00000462700 LINC00518Q8N0U6 118 aa10.97□□□□□ -0.65
COL9A3-203ENST00000462700 COPS9Q8WXC6 57 aa10.97□□□□□ -0.65
COL9A3-203ENST00000462700 PPDPFQ9H3Y8 114 aa10.97□□□□□ -0.65
COL9A3-203ENST00000462700 HSBP1L1C9JCN9 74 aa10.96□□□□□ -0.65
COL9A3-203ENST00000462700 LINC00483Q53H64 154 aa10.96□□□□□ -0.65
COL9A3-203ENST00000462700 LPAP08519 4548 aa10.94□□□□□ -0.66
COL9A3-203ENST00000462700 HINT1P49773 126 aaPredicted RBP10.94□□□□□ -0.66
COL9A3-203ENST00000462700 PRR4Q16378 134 aa10.94□□□□□ -0.66
COL9A3-203ENST00000462700 GAGE2AQ6NT46 116 aa10.94□□□□□ -0.66
COL9A3-203ENST00000462700 MUSTN1Q8IVN3 82 aa10.93□□□□□ -0.66
COL9A3-203ENST00000462700 SCGB1D1O95968 90 aa10.92□□□□□ -0.66
COL9A3-203ENST00000462700 LCE2BO14633 110 aa10.9□□□□□ -0.66
COL9A3-203ENST00000462700 CTAG1AP78358 180 aa10.9□□□□□ -0.66
COL9A3-203ENST00000462700 C6orf99Q4VX62 202 aa10.88□□□□□ -0.67
COL9A3-203ENST00000462700 A6NDN8 102 aa10.87□□□□□ -0.67
COL9A3-203ENST00000462700 ELOF1P60002 83 aaKnown RBP10.87□□□□□ -0.67
COL9A3-203ENST00000462700 SPAG11AQ6PDA7 123 aa10.87□□□□□ -0.67
COL9A3-203ENST00000462700 ST20-AS1Q8NBB2 130 aa10.87□□□□□ -0.67
COL9A3-203ENST00000462700 COX7BP24311 80 aa10.86□□□□□ -0.67
COL9A3-203ENST00000462700 Q8NBF4 154 aa10.86□□□□□ -0.67
COL9A3-203ENST00000462700 DHRS4-AS1Q9P1J3 65 aa10.86□□□□□ -0.67
COL9A3-203ENST00000462700 IGLV9-49A0A0B4J1Y8 123 aa10.85□□□□□ -0.67
COL9A3-203ENST00000462700 RETNLBQ9BQ08 111 aa10.85□□□□□ -0.67
COL9A3-203ENST00000462700 MOBPQ13875 183 aa10.84□□□□□ -0.67
COL9A3-203ENST00000462700 TRAV13-2A0A0B4J235 113 aa10.83□□□□□ -0.68
COL9A3-203ENST00000462700 C4orf48Q5BLP8 95 aa10.83□□□□□ -0.68
COL9A3-203ENST00000462700 TRBV7-6A0A0J9YX20 115 aa10.82□□□□□ -0.68
COL9A3-203ENST00000462700 COX8AP10176 69 aa10.81□□□□□ -0.68
COL9A3-203ENST00000462700 SSBP3-AS1Q7Z2R9 100 aa10.81□□□□□ -0.68
COL9A3-203ENST00000462700 A0A1B0GWB2 263 aa10.8□□□□□ -0.68
COL9A3-203ENST00000462700 SPRR1BP22528 89 aa10.79□□□□□ -0.68
COL9A3-203ENST00000462700 RNF213Q63HN8 5207 aa10.79□□□□□ -0.68
COL9A3-203ENST00000462700 A4D1N5 150 aa10.78□□□□□ -0.68
COL9A3-203ENST00000462700 DLEU1O43261 78 aa10.78□□□□□ -0.68
COL9A3-203ENST00000462700 SPINK1P00995 79 aa10.78□□□□□ -0.68
COL9A3-203ENST00000462700 SMIM11BQ8TCY0 68 aa10.78□□□□□ -0.68
COL9A3-203ENST00000462700 C9orf153Q5TBE3 101 aa10.77□□□□□ -0.69
COL9A3-203ENST00000462700 PAM16Q9Y3D7 125 aa10.76□□□□□ -0.69
COL9A3-203ENST00000462700 SPATA45Q537H7 98 aa10.75□□□□□ -0.69
COL9A3-203ENST00000462700 SLC25A34Q6PIV7 304 aa10.75□□□□□ -0.69
COL9A3-203ENST00000462700 HIST1H4GQ99525 98 aa10.75□□□□□ -0.69
COL9A3-203ENST00000462700 C14orf144Q96I85 54 aa10.74□□□□□ -0.69
COL9A3-203ENST00000462700 VAMP8Q9BV40 100 aa10.74□□□□□ -0.69
COL9A3-203ENST00000462700 IGLV7-46A0A075B6I9 117 aa10.72□□□□□ -0.69
COL9A3-203ENST00000462700 RPS29P62273 56 aaKnown RBP10.72□□□□□ -0.69
COL9A3-203ENST00000462700 TAL2Q16559 108 aa10.72□□□□□ -0.69
COL9A3-203ENST00000462700 DEFB105AQ8NG35 78 aa10.71□□□□□ -0.69
COL9A3-203ENST00000462700 LAMTOR3Q9UHA4 124 aa10.71□□□□□ -0.69
COL9A3-203ENST00000462700 TEX49A0A1B0GTD5 131 aa10.7□□□□□ -0.7
COL9A3-203ENST00000462700 C12orf57Q99622 126 aa10.7□□□□□ -0.7
COL9A3-203ENST00000462700 TPRXLQ17RH7 258 aa10.69□□□□□ -0.7
COL9A3-203ENST00000462700 FP248Q71RG6 208 aaPredicted RBP10.69□□□□□ -0.7
COL9A3-203ENST00000462700 NHP2Q9NX24 153 aaKnown RBP10.69□□□□□ -0.7
COL9A3-203ENST00000462700 HIGD1BQ9P298 99 aa10.69□□□□□ -0.7
COL9A3-203ENST00000462700 IGLV5-48A0A075B6I7 105 aa10.68□□□□□ -0.7
COL9A3-203ENST00000462700 LINC01547P58512 204 aaPredicted RBP10.68□□□□□ -0.7
COL9A3-203ENST00000462700 VAMP3Q15836 100 aa10.68□□□□□ -0.7
COL9A3-203ENST00000462700 Q1RN00 199 aa10.67□□□□□ -0.7
COL9A3-203ENST00000462700 C2orf91Q6ZV80 131 aa10.67□□□□□ -0.7
COL9A3-203ENST00000462700 Q8N377 158 aa10.67□□□□□ -0.7
COL9A3-203ENST00000462700 TMA7Q9Y2S6 64 aaKnown RBP10.66□□□□□ -0.7
COL9A3-203ENST00000462700 PYY3Q5JQD4 70 aa10.65□□□□□ -0.7
COL9A3-203ENST00000462700 SMIM29Q86T20 159 aa10.65□□□□□ -0.7
COL9A3-203ENST00000462700 SLC25A20O43772 301 aa10.64□□□□□ -0.71
COL9A3-203ENST00000462700 LINC00575Q6W349 94 aa10.64□□□□□ -0.71
COL9A3-203ENST00000462700 CDIP1Q9H305 208 aa10.63□□□□□ -0.71
COL9A3-203ENST00000462700 CFC1BP0CG36 223 aa10.62□□□□□ -0.71
COL9A3-203ENST00000462700 CFC1P0CG37 223 aa10.62□□□□□ -0.71
COL9A3-203ENST00000462700 hADV29S1A0JD25 119 aa10.6□□□□□ -0.71
COL9A3-203ENST00000462700 BVES-AS1Q5T3Y7 98 aa10.6□□□□□ -0.71
COL9A3-203ENST00000462700 PRO1933Q9H354 126 aa10.6□□□□□ -0.71
COL9A3-203ENST00000462700 A0A0B4J2C4 111 aa10.59□□□□□ -0.71
COL9A3-203ENST00000462700 HRCT1Q6UXD1 115 aa10.59□□□□□ -0.71
COL9A3-203ENST00000462700 RAB37Q96AX2 223 aa10.59□□□□□ -0.71
COL9A3-203ENST00000462700 CEND1Q8N111 149 aa10.58□□□□□ -0.72
COL9A3-203ENST00000462700 H7C2G1 150 aa10.57□□□□□ -0.72
COL9A3-203ENST00000462700 Q6ZQY7 126 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms